Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers
ABSTRACT: The objective of this paper is to establish a genetic characterization of the Senepol (S, n=49), Holstein (H, n= 60), Hartón del Valle (HV, n=60), Angus (A, n=61) and Brangus (Br, n=60) cattle breeds in Colombia, by using the following microsatellite markers: SPS115, INRA64, ETH225, ETH10,...
- Autores:
-
Montoya, Alba Eunery
Cerón Muñoz, Mario Fernando
Moreno, Manuel A
Martínez, Edwin
Corrales Álvarez, Juan David
Tirado, Juan F
Calvo Cardona, Samir Julián
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2010
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/10217
- Acceso en línea:
- http://hdl.handle.net/10495/10217
- Palabra clave:
- Cattle
Genetic Variability
Molecular marker
- Rights
- openAccess
- License
- Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)
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| dc.title.spa.fl_str_mv |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| dc.title.alternative.spa.fl_str_mv |
Caracterización genética de las razas Hartón del Valle, Angus, Brangus, Holstein y Senepol en Colombia, usando 10 marcadores microsatélites |
| title |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| spellingShingle |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers Cattle Genetic Variability Molecular marker |
| title_short |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| title_full |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| title_fullStr |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| title_full_unstemmed |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| title_sort |
Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers |
| dc.creator.fl_str_mv |
Montoya, Alba Eunery Cerón Muñoz, Mario Fernando Moreno, Manuel A Martínez, Edwin Corrales Álvarez, Juan David Tirado, Juan F Calvo Cardona, Samir Julián |
| dc.contributor.author.none.fl_str_mv |
Montoya, Alba Eunery Cerón Muñoz, Mario Fernando Moreno, Manuel A Martínez, Edwin Corrales Álvarez, Juan David Tirado, Juan F Calvo Cardona, Samir Julián |
| dc.subject.none.fl_str_mv |
Cattle Genetic Variability Molecular marker |
| topic |
Cattle Genetic Variability Molecular marker |
| description |
ABSTRACT: The objective of this paper is to establish a genetic characterization of the Senepol (S, n=49), Holstein (H, n= 60), Hartón del Valle (HV, n=60), Angus (A, n=61) and Brangus (Br, n=60) cattle breeds in Colombia, by using the following microsatellite markers: SPS115, INRA64, ETH225, ETH10, BM1824, INRA37, TGLA122, TGLA126, INRA32, and BM2113. A total of 142 alleles were obtained for ten analyzed loci, considering the five cattle breeds as a whole. The number of alleles per locus ranged from 9 (INRA64 and 1824) to 22 (TGLA122). The expected heterozygosity was between 0.79 (INRA32) and 0.90 (INRA37) in all the cattle breeds, respectively; and medium heterozygosity was 0.84. The average number of alleles per breed varied from 9.2 in the Senepol breed to 10.3 in the Holstein breed. The expected heterozygosity range varied from 0.75 in the Hartón del Valle breed and 0.82 in the Holstein breed, with an average of 0.79. Hardy Wienberg disequilibrium was observed (p>0.05) when the populations were analyzed with all the markers. All the populations presented a heterozygote deficit, which could be the result of a strong endogamy tendency within all the herds. The markers used in this study allowed a genetic characterization of the analyzed populations. The microsatellites panel in the Hartón del Valle breed should be increased in order to increase the reliability value. Microsatellite panels could solve parenthood cases for the remainder breeds. |
| publishDate |
2010 |
| dc.date.issued.none.fl_str_mv |
2010 |
| dc.date.accessioned.none.fl_str_mv |
2018-10-06T13:34:30Z |
| dc.date.available.none.fl_str_mv |
2018-10-06T13:34:30Z |
| dc.type.spa.fl_str_mv |
info:eu-repo/semantics/article |
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http://purl.org/coar/version/c_970fb48d4fbd8a85 |
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info:eu-repo/semantics/publishedVersion |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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https://purl.org/redcol/resource_type/ART |
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Artículo de investigación |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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publishedVersion |
| dc.identifier.citation.spa.fl_str_mv |
Montoya AE, Cerón-Muñoz MF, Moreno MA, Martínez E, Corrales JD, Tirado JF, Calvo SJ. Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers. Rev Colomb Cienc Pecu. 2010 Sep; 23(3): 283-291 |
| dc.identifier.issn.none.fl_str_mv |
0120-0690 |
| dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10495/10217 |
| dc.identifier.eissn.none.fl_str_mv |
2256-2958 |
| identifier_str_mv |
Montoya AE, Cerón-Muñoz MF, Moreno MA, Martínez E, Corrales JD, Tirado JF, Calvo SJ. Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers. Rev Colomb Cienc Pecu. 2010 Sep; 23(3): 283-291 0120-0690 2256-2958 |
| url |
http://hdl.handle.net/10495/10217 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Rev. Colomb. Cienc. Pecu. |
| dc.rights.*.fl_str_mv |
Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO) |
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info:eu-repo/semantics/openAccess |
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https://creativecommons.org/licenses/by-nc-sa/2.5/co/ |
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Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO) https://creativecommons.org/licenses/by-nc-sa/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by-nc-sa/4.0/ |
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openAccess |
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application/pdf |
| dc.publisher.spa.fl_str_mv |
Universidad de Antioquia, Facultad de Ciencias Agrarias |
| dc.publisher.place.spa.fl_str_mv |
Medellín, Colombia |
| institution |
Universidad de Antioquia |
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Montoya, Alba EuneryCerón Muñoz, Mario FernandoMoreno, Manuel AMartínez, EdwinCorrales Álvarez, Juan DavidTirado, Juan FCalvo Cardona, Samir Julián2018-10-06T13:34:30Z2018-10-06T13:34:30Z2010Montoya AE, Cerón-Muñoz MF, Moreno MA, Martínez E, Corrales JD, Tirado JF, Calvo SJ. Genetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markers. Rev Colomb Cienc Pecu. 2010 Sep; 23(3): 283-2910120-0690http://hdl.handle.net/10495/102172256-2958ABSTRACT: The objective of this paper is to establish a genetic characterization of the Senepol (S, n=49), Holstein (H, n= 60), Hartón del Valle (HV, n=60), Angus (A, n=61) and Brangus (Br, n=60) cattle breeds in Colombia, by using the following microsatellite markers: SPS115, INRA64, ETH225, ETH10, BM1824, INRA37, TGLA122, TGLA126, INRA32, and BM2113. A total of 142 alleles were obtained for ten analyzed loci, considering the five cattle breeds as a whole. The number of alleles per locus ranged from 9 (INRA64 and 1824) to 22 (TGLA122). The expected heterozygosity was between 0.79 (INRA32) and 0.90 (INRA37) in all the cattle breeds, respectively; and medium heterozygosity was 0.84. The average number of alleles per breed varied from 9.2 in the Senepol breed to 10.3 in the Holstein breed. The expected heterozygosity range varied from 0.75 in the Hartón del Valle breed and 0.82 in the Holstein breed, with an average of 0.79. Hardy Wienberg disequilibrium was observed (p>0.05) when the populations were analyzed with all the markers. All the populations presented a heterozygote deficit, which could be the result of a strong endogamy tendency within all the herds. The markers used in this study allowed a genetic characterization of the analyzed populations. The microsatellites panel in the Hartón del Valle breed should be increased in order to increase the reliability value. Microsatellite panels could solve parenthood cases for the remainder breeds.RESUMEN: El objetivo de este trabajo fue caracterizar genéticamente las razas bovinas Senepol (S, n=49), Holstein (H, n= 60), Hartón del Valle (HV, n=60), Angus (A, n=61) y Brangus (Br, n=60) en Colombia, con los marcadores microsatélites SPS115, INRA64, ETH225, ETH10, BM1824, INRA37, TGLA122, TGLA126, INRA32 y BM2113. En total, 142 alelos fueron encontrados en los diez loci analizados, considerando las cinco razas como un todo. El número de alelos por locus estuvo entre 9 (INRA64 y BM1824) y 22 (TGLA122). La Heterocigosidad esperada a través de todas las razas varió entre 0.79 (INRA32) y 0,90 (INRA37) y heterocigosidad media esperada de 0.84. El número promedio de alelos por raza varió de 9.2 en la raza S a 10.3 en la raza H. El rango de la Heterocigosidad esperada entre las razas varió entre 0.75 en la raza HV y 0.82 en la raza H, con una media de 0.79. Al analizar las poblaciones con el total de marcadores, todas se encontraron en desequilibrio de Hardy Weinberg (p>0.05). Todas las poblaciones presentaron un déficit de heterocigotos, para todas las poblaciones, lo que podría ser el resultado de la fuerte tendencia a la endogamia dentro de los diferentes hatos. Los resultados indicaron que los marcadores utilizados en este estudio permitieron caracterizar genéticamente las poblaciones analizadas. En el caso de la Raza HV, se debe aumentar el panel de microsatélites para aumentar el valor de confiabilidad. Para las demás razas el panel de microsatélites permitiría resolver casos de filiación.application/pdfengUniversidad de Antioquia, Facultad de Ciencias AgrariasMedellín, Colombiainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-sa/4.0/CattleGenetic VariabilityMolecular markerGenetic characterization of the Hartón del Valle, Angus, Brangus, Holstein, and Senepol cattle breeds in Colombia, using ten microsatellite markersCaracterización genética de las razas Hartón del Valle, Angus, Brangus, Holstein y Senepol en Colombia, usando 10 marcadores microsatélitesRev. Colomb. Cienc. Pecu.Revista Colombiana de Ciencias Pecuarias283291233ORIGINALCeronMunozMarioFernando_2010_GeneticCharacterizationHartonValle.pdfCeronMunozMarioFernando_2010_GeneticCharacterizationHartonValle.pdfArtículo de investigaciónapplication/pdf195050http://bibliotecadigital.udea.edu.co/bitstream/10495/10217/1/CeronMunozMarioFernando_2010_GeneticCharacterizationHartonValle.pdf8b57206cef3536bd863d7c8f681b3e7cMD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://bibliotecadigital.udea.edu.co/bitstream/10495/10217/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/10217/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfLicenciaapplication/rdf+xml; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/10217/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/10217/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5510495/10217oai:bibliotecadigital.udea.edu.co:10495/102172021-05-21 20:31:34.087Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |