Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus

ABSTRACT: Background: Functional polymorphisms of the solute carrier family 22, member 4 (SLC22A4), runt related transcription factor 1 (RUNX1) and small ubiquitin-like modifier 4 (SUMO4) genes have been shown to be associated with several autoimmune diseases. Objective: To test the possible role of...

Full description

Autores:
Orozco, G.
Sánchez, E.
Gómez Osorio, Luis Miguel
González Gay, M.A.
López Nevot, M.A.
Torres, B.
Ortego Centeno, N.
Jiménez Alonso, J.
Ramón, E.
Sánchez Román, J.
Anaya Cabrera, Juan Manuel
Sturfelt, G.
Gunnarsson, I.
Svennungsson, E.
Alarcón Riquelme, M.
González Escribano, M. F.
Martín, J.
Tipo de recurso:
Article of investigation
Fecha de publicación:
2006
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/25961
Acceso en línea:
http://hdl.handle.net/10495/25961
Palabra clave:
Lupus Eritematoso Sistémico
Lupus Erythematosus, Systemic
Proteína 1 Compañera de Translocación de RUNX1
RUNX1 Translocation Partner 1 Protein
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc/2.5/co/
id UDEA2_1972a884cbeb2228ef9e52ff728e6f38
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/25961
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
title Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
spellingShingle Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
Lupus Eritematoso Sistémico
Lupus Erythematosus, Systemic
Proteína 1 Compañera de Translocación de RUNX1
RUNX1 Translocation Partner 1 Protein
title_short Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
title_full Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
title_fullStr Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
title_full_unstemmed Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
title_sort Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus
dc.creator.fl_str_mv Orozco, G.
Sánchez, E.
Gómez Osorio, Luis Miguel
González Gay, M.A.
López Nevot, M.A.
Torres, B.
Ortego Centeno, N.
Jiménez Alonso, J.
Ramón, E.
Sánchez Román, J.
Anaya Cabrera, Juan Manuel
Sturfelt, G.
Gunnarsson, I.
Svennungsson, E.
Alarcón Riquelme, M.
González Escribano, M. F.
Martín, J.
dc.contributor.author.none.fl_str_mv Orozco, G.
Sánchez, E.
Gómez Osorio, Luis Miguel
González Gay, M.A.
López Nevot, M.A.
Torres, B.
Ortego Centeno, N.
Jiménez Alonso, J.
Ramón, E.
Sánchez Román, J.
Anaya Cabrera, Juan Manuel
Sturfelt, G.
Gunnarsson, I.
Svennungsson, E.
Alarcón Riquelme, M.
González Escribano, M. F.
Martín, J.
dc.subject.decs.none.fl_str_mv Lupus Eritematoso Sistémico
Lupus Erythematosus, Systemic
Proteína 1 Compañera de Translocación de RUNX1
RUNX1 Translocation Partner 1 Protein
topic Lupus Eritematoso Sistémico
Lupus Erythematosus, Systemic
Proteína 1 Compañera de Translocación de RUNX1
RUNX1 Translocation Partner 1 Protein
description ABSTRACT: Background: Functional polymorphisms of the solute carrier family 22, member 4 (SLC22A4), runt related transcription factor 1 (RUNX1) and small ubiquitin-like modifier 4 (SUMO4) genes have been shown to be associated with several autoimmune diseases. Objective: To test the possible role of these variants in susceptibility to or severity of systemic lupus erythematosus (SLE), on the basis that common genetic bases are shared by autoimmune disorders. Methods: 597 SLE patients and 987 healthy controls of white Spanish origin were studied. Two additional cohorts of 228 SLE patients from Sweden and 122 SLE patients from Colombia were included. A case– control association study was carried out with six single nucleotide polymorphisms (SNP) spanning the SLC22A4 gene, one SNP in RUNX1 gene, and one additional SNP in SUM04 gene. Results: No significant differences were observed between SLE patients and healthy controls when comparing the distribution of the genotypes or alleles of any of the SLC22A4, RUNX1, or SUMO4 polymorphisms tested. Significant differences were found in the distribution of the SUMO4 genotypes and alleles among SLE patients with and without nephritis, but after multiple testing correction, the significance of the association was lost. The association of SUMO4 with nephritis could not be verified in two independent SLE cohorts from Sweden and Colombia. Conclusions: These results suggest that the SLC22A4, RUNX1, and SUMO4 polymorphisms analysed do not play a role in the susceptibility to or severity of SLE.
publishDate 2006
dc.date.issued.none.fl_str_mv 2006
dc.date.accessioned.none.fl_str_mv 2022-02-10T20:52:12Z
dc.date.available.none.fl_str_mv 2022-02-10T20:52:12Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.local.spa.fl_str_mv Artículo de investigación
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Orozco, G., Sánchez, E., Gómez, L. M., González-Gay, M. A., López-Nevot, M. A., Torres, B., Ortego-Centeno, N., Jiménez-Alonso, J., de Ramón, E., Sánchez Román, J., Anaya, J. M., Sturfelt, G., Gunnarsson, I., Svennungsson, E., Alarcón-Riquelme, M., González-Escribano, M. F., & Martín, J. (2006). Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus. Annals of the rheumatic diseases, 65(6), 791–795. https://doi.org/10.1136/ard.2005.044891
dc.identifier.issn.none.fl_str_mv 0003-4967
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/25961
dc.identifier.doi.none.fl_str_mv 10.1136/ard.2005.044891
dc.identifier.eissn.none.fl_str_mv 1468-2060
identifier_str_mv Orozco, G., Sánchez, E., Gómez, L. M., González-Gay, M. A., López-Nevot, M. A., Torres, B., Ortego-Centeno, N., Jiménez-Alonso, J., de Ramón, E., Sánchez Román, J., Anaya, J. M., Sturfelt, G., Gunnarsson, I., Svennungsson, E., Alarcón-Riquelme, M., González-Escribano, M. F., & Martín, J. (2006). Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus. Annals of the rheumatic diseases, 65(6), 791–795. https://doi.org/10.1136/ard.2005.044891
0003-4967
10.1136/ard.2005.044891
1468-2060
url http://hdl.handle.net/10495/25961
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Ann. Rheum. Dis.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc/2.5/co/
http://purl.org/coar/access_right/c_abf2
https://creativecommons.org/licenses/by-nc/4.0/
dc.format.extent.spa.fl_str_mv 5
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv BMJ Publishing Group
dc.publisher.group.spa.fl_str_mv Biología Celular y Molecular CIB U. de A. U. del Rosario
dc.publisher.place.spa.fl_str_mv Londres, Inglaterra
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/2/license_rdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/3/license.txt
http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/1/OrozcoG_2006_.pdf
bitstream.checksum.fl_str_mv c0c92b0ffc8b7d22d9cf56754a416a76
8a4605be74aa9ea9d79846c1fba20a33
f1ae387b8b13ef1dd86ac60e07c51fc7
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional Universidad de Antioquia
repository.mail.fl_str_mv andres.perez@udea.edu.co
_version_ 1812173179985068032
spelling Orozco, G.Sánchez, E.Gómez Osorio, Luis MiguelGonzález Gay, M.A.López Nevot, M.A.Torres, B.Ortego Centeno, N.Jiménez Alonso, J.Ramón, E.Sánchez Román, J.Anaya Cabrera, Juan ManuelSturfelt, G.Gunnarsson, I.Svennungsson, E.Alarcón Riquelme, M.González Escribano, M. F.Martín, J.2022-02-10T20:52:12Z2022-02-10T20:52:12Z2006Orozco, G., Sánchez, E., Gómez, L. M., González-Gay, M. A., López-Nevot, M. A., Torres, B., Ortego-Centeno, N., Jiménez-Alonso, J., de Ramón, E., Sánchez Román, J., Anaya, J. M., Sturfelt, G., Gunnarsson, I., Svennungsson, E., Alarcón-Riquelme, M., González-Escribano, M. F., & Martín, J. (2006). Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosus. Annals of the rheumatic diseases, 65(6), 791–795. https://doi.org/10.1136/ard.2005.0448910003-4967http://hdl.handle.net/10495/2596110.1136/ard.2005.0448911468-2060ABSTRACT: Background: Functional polymorphisms of the solute carrier family 22, member 4 (SLC22A4), runt related transcription factor 1 (RUNX1) and small ubiquitin-like modifier 4 (SUMO4) genes have been shown to be associated with several autoimmune diseases. Objective: To test the possible role of these variants in susceptibility to or severity of systemic lupus erythematosus (SLE), on the basis that common genetic bases are shared by autoimmune disorders. Methods: 597 SLE patients and 987 healthy controls of white Spanish origin were studied. Two additional cohorts of 228 SLE patients from Sweden and 122 SLE patients from Colombia were included. A case– control association study was carried out with six single nucleotide polymorphisms (SNP) spanning the SLC22A4 gene, one SNP in RUNX1 gene, and one additional SNP in SUM04 gene. Results: No significant differences were observed between SLE patients and healthy controls when comparing the distribution of the genotypes or alleles of any of the SLC22A4, RUNX1, or SUMO4 polymorphisms tested. Significant differences were found in the distribution of the SUMO4 genotypes and alleles among SLE patients with and without nephritis, but after multiple testing correction, the significance of the association was lost. The association of SUMO4 with nephritis could not be verified in two independent SLE cohorts from Sweden and Colombia. Conclusions: These results suggest that the SLC22A4, RUNX1, and SUMO4 polymorphisms analysed do not play a role in the susceptibility to or severity of SLE.COL00009625application/pdfengBMJ Publishing GroupBiología Celular y Molecular CIB U. de A. U. del RosarioLondres, Inglaterrainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc/4.0/Study of the role of functional variants of SLC22A4, RUNX1 and SUMO4 in systemic lupus erythematosusLupus Eritematoso SistémicoLupus Erythematosus, SystemicProteína 1 Compañera de Translocación de RUNX1RUNX1 Translocation Partner 1 ProteinAnn. Rheum. Dis.Annals of the Rheumatic Diseases791795656CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8933http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/2/license_rdfc0c92b0ffc8b7d22d9cf56754a416a76MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD53ORIGINALOrozcoG_2006_.pdfOrozcoG_2006_.pdfArtículo de investigaciónapplication/pdf207207http://bibliotecadigital.udea.edu.co/bitstream/10495/25961/1/OrozcoG_2006_.pdff1ae387b8b13ef1dd86ac60e07c51fc7MD5110495/25961oai:bibliotecadigital.udea.edu.co:10495/259612022-02-10 15:52:13.474Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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