The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers

ABSTRACT: Paracoccidioides brasiliensis is the aetiological agent of paracoccidioidomycosis, the most important systemic mycosis in Latin America. In order to study the diversity of P. brasiliensis mitochondrial genes, to evaluate previous taxonomic proposals, and to explore the hypothesis that the...

Full description

Autores:
Salgado Salazar, Catalina
Jones, Leandro Roberto
Restrepo, Ángela
McEwen, Juan
Tipo de recurso:
Article of investigation
Fecha de publicación:
2010
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/21551
Acceso en línea:
http://hdl.handle.net/10495/21551
Palabra clave:
Paracoccidioides
Filogenia
Phylogeny
Patógenos
http://aims.fao.org/aos/agrovoc/c_31590
http://aims.fao.org/aos/agrovoc/c_13325
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_0f07b7e926594dcf5b7dc31158e20c37
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/21551
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
title The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
spellingShingle The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
Paracoccidioides
Filogenia
Phylogeny
Patógenos
http://aims.fao.org/aos/agrovoc/c_31590
http://aims.fao.org/aos/agrovoc/c_13325
title_short The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
title_full The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
title_fullStr The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
title_full_unstemmed The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
title_sort The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markers
dc.creator.fl_str_mv Salgado Salazar, Catalina
Jones, Leandro Roberto
Restrepo, Ángela
McEwen, Juan
dc.contributor.author.none.fl_str_mv Salgado Salazar, Catalina
Jones, Leandro Roberto
Restrepo, Ángela
McEwen, Juan
dc.subject.agrovoc.none.fl_str_mv Paracoccidioides
Filogenia
Phylogeny
topic Paracoccidioides
Filogenia
Phylogeny
Patógenos
http://aims.fao.org/aos/agrovoc/c_31590
http://aims.fao.org/aos/agrovoc/c_13325
dc.subject.proposal.spa.fl_str_mv Patógenos
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_31590
http://aims.fao.org/aos/agrovoc/c_13325
description ABSTRACT: Paracoccidioides brasiliensis is the aetiological agent of paracoccidioidomycosis, the most important systemic mycosis in Latin America. In order to study the diversity of P. brasiliensis mitochondrial genes, to evaluate previous taxonomic proposals, and to explore the hypothesis that the previously described ‘‘divergent isolate’’ B30 (also called Pb01) could represent a new P. brasiliensis species, we undertook a molecular phylogenetic analysis based on five mitochondrial markers. Mitochondrial sequences of 59 P. brasiliensis isolates obtained from clinical and environmental samples, and the orthologous genes from outgroup species, are reported and analysed using parsimony and Bayesian methods. The combined data set comprised 2364 characters, of which 426 were informative. One of the studied strains presented a 376-nt insertion at the apocytochrome b (cob) gene. The corresponding sequence had a high similarity (79%) with an intron found in the Neurospora crassa cob gene. Interestingly, this intron is absent in the previously published sequence of the P. brasiliensis mitochondrial genome. Our trees were moderately congruent with the previous P. brasiliensis taxonomic proposals. Furthermore, we identified a new monophyletic group of strains within P. brasiliensis. Nevertheless, the phylogenetic species recognition (PSR) analyses described here suggested that these groups of strains could represent geographical variants rather than different Paracoccidioides cryptic species. In addition, and as previously proposed by other authors, these analyses supported the existence of a new specie of Paracoccidioides, which includes the previously described, divergent isolate B30 ⁄Pb01. This is the first report providing evidence, independent of nuclear markers, for the split of this important human pathogen into two species. We support the formal description of the B30 ⁄Pb01 as new specie.
publishDate 2010
dc.date.issued.none.fl_str_mv 2010
dc.date.accessioned.none.fl_str_mv 2021-08-05T21:43:43Z
dc.date.available.none.fl_str_mv 2021-08-05T21:43:43Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.local.spa.fl_str_mv Artículo de investigación
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.issn.none.fl_str_mv 0748-3007
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/21551
dc.identifier.doi.none.fl_str_mv 10.1111/j.1096-0031.2010.00307.x
dc.identifier.eissn.none.fl_str_mv 1096-0031
identifier_str_mv 0748-3007
10.1111/j.1096-0031.2010.00307.x
1096-0031
url http://hdl.handle.net/10495/21551
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Cladistics
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
http://purl.org/coar/access_right/c_abf2
https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.format.extent.spa.fl_str_mv 12
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Wiley Blackwell Publishing
dc.publisher.group.spa.fl_str_mv Micología Médica y Experimental
dc.publisher.place.spa.fl_str_mv Londres, Reino Unido
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/1/SalgadoCatalina_2010_HumanFungalPathogen.pdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/2/license_rdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/3/license.txt
bitstream.checksum.fl_str_mv 7096a6a5da2cf1822cc4ab28836a66ac
b88b088d9957e670ce3b3fbe2eedbc13
8a4605be74aa9ea9d79846c1fba20a33
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional Universidad de Antioquia
repository.mail.fl_str_mv andres.perez@udea.edu.co
_version_ 1812173261362954240
spelling Salgado Salazar, CatalinaJones, Leandro RobertoRestrepo, ÁngelaMcEwen, Juan2021-08-05T21:43:43Z2021-08-05T21:43:43Z20100748-3007http://hdl.handle.net/10495/2155110.1111/j.1096-0031.2010.00307.x1096-0031ABSTRACT: Paracoccidioides brasiliensis is the aetiological agent of paracoccidioidomycosis, the most important systemic mycosis in Latin America. In order to study the diversity of P. brasiliensis mitochondrial genes, to evaluate previous taxonomic proposals, and to explore the hypothesis that the previously described ‘‘divergent isolate’’ B30 (also called Pb01) could represent a new P. brasiliensis species, we undertook a molecular phylogenetic analysis based on five mitochondrial markers. Mitochondrial sequences of 59 P. brasiliensis isolates obtained from clinical and environmental samples, and the orthologous genes from outgroup species, are reported and analysed using parsimony and Bayesian methods. The combined data set comprised 2364 characters, of which 426 were informative. One of the studied strains presented a 376-nt insertion at the apocytochrome b (cob) gene. The corresponding sequence had a high similarity (79%) with an intron found in the Neurospora crassa cob gene. Interestingly, this intron is absent in the previously published sequence of the P. brasiliensis mitochondrial genome. Our trees were moderately congruent with the previous P. brasiliensis taxonomic proposals. Furthermore, we identified a new monophyletic group of strains within P. brasiliensis. Nevertheless, the phylogenetic species recognition (PSR) analyses described here suggested that these groups of strains could represent geographical variants rather than different Paracoccidioides cryptic species. In addition, and as previously proposed by other authors, these analyses supported the existence of a new specie of Paracoccidioides, which includes the previously described, divergent isolate B30 ⁄Pb01. This is the first report providing evidence, independent of nuclear markers, for the split of this important human pathogen into two species. We support the formal description of the B30 ⁄Pb01 as new specie.COL001370912application/pdfengWiley Blackwell PublishingMicología Médica y ExperimentalLondres, Reino Unidoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/The human fungal pathogen Paracoccidioides brasiliensis ( Onygenales : Ajellomycetaceae ) is a complex of two species : phylogenetic evidence from five mitochondrial markersParacoccidioidesFilogeniaPhylogenyPatógenoshttp://aims.fao.org/aos/agrovoc/c_31590http://aims.fao.org/aos/agrovoc/c_13325CladisticsCladistics613624266ORIGINALSalgadoCatalina_2010_HumanFungalPathogen.pdfSalgadoCatalina_2010_HumanFungalPathogen.pdfArtículo de investigaciónapplication/pdf377622http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/1/SalgadoCatalina_2010_HumanFungalPathogen.pdf7096a6a5da2cf1822cc4ab28836a66acMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/21551/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/21551oai:bibliotecadigital.udea.edu.co:10495/215512022-04-22 10:19:32.628Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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