Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)

ABSTRACT: The mechanisms controlling evolutionary shifts between dry and fleshy fruits in angiosperms are poorly understood. In Solanaceae, Cestrum and Brugmansia represent cases of convergent evolution of fleshy and dry fruits, respectively. Here we study the anatomical and genetic bases of the ind...

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Autores:
Hernández Ciro, Natalí
Tipo de recurso:
Article of investigation
Fecha de publicación:
2020
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/17659
Acceso en línea:
http://hdl.handle.net/10495/17659
Palabra clave:
Bayas
Berries
Variación (Botánica)
Botany - Variation
Anatomía de las frutas
Fruit - Anatomy
Filogenia (Botánica)
Plants - Phylogeny
Solanaceae
Cestrum
Brugmansia
Frutos secos
Nuts
http://aims.fao.org/aos/agrovoc/c_7215
http://aims.fao.org/aos/agrovoc/c_34591
http://aims.fao.org/aos/agrovoc/c_ae2cc043
http://aims.fao.org/aos/agrovoc/c_12873
Rights
embargoedAccess
License
Atribución-NoComercial-SinDerivadas 2.5 Colombia (CC BY-NC-ND 2.5 CO)
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network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
dc.title.alternative.spa.fl_str_mv Bases genéticas y anatómicas de la evolución convergente de frutos carnosos y secos dehiscentes en Cestrum y Brugmansia (Solanaceae)
title Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
spellingShingle Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
Bayas
Berries
Variación (Botánica)
Botany - Variation
Anatomía de las frutas
Fruit - Anatomy
Filogenia (Botánica)
Plants - Phylogeny
Solanaceae
Cestrum
Brugmansia
Frutos secos
Nuts
http://aims.fao.org/aos/agrovoc/c_7215
http://aims.fao.org/aos/agrovoc/c_34591
http://aims.fao.org/aos/agrovoc/c_ae2cc043
http://aims.fao.org/aos/agrovoc/c_12873
title_short Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
title_full Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
title_fullStr Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
title_full_unstemmed Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
title_sort Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)
dc.creator.fl_str_mv Hernández Ciro, Natalí
dc.contributor.advisor.none.fl_str_mv Pabón Mora, Natalia
dc.contributor.author.none.fl_str_mv Hernández Ciro, Natalí
dc.subject.lemb.none.fl_str_mv Bayas
Berries
Variación (Botánica)
Botany - Variation
Anatomía de las frutas
Fruit - Anatomy
Filogenia (Botánica)
Plants - Phylogeny
topic Bayas
Berries
Variación (Botánica)
Botany - Variation
Anatomía de las frutas
Fruit - Anatomy
Filogenia (Botánica)
Plants - Phylogeny
Solanaceae
Cestrum
Brugmansia
Frutos secos
Nuts
http://aims.fao.org/aos/agrovoc/c_7215
http://aims.fao.org/aos/agrovoc/c_34591
http://aims.fao.org/aos/agrovoc/c_ae2cc043
http://aims.fao.org/aos/agrovoc/c_12873
dc.subject.agrovoc.none.fl_str_mv Solanaceae
Cestrum
Brugmansia
Frutos secos
Nuts
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_7215
http://aims.fao.org/aos/agrovoc/c_34591
http://aims.fao.org/aos/agrovoc/c_ae2cc043
http://aims.fao.org/aos/agrovoc/c_12873
description ABSTRACT: The mechanisms controlling evolutionary shifts between dry and fleshy fruits in angiosperms are poorly understood. In Solanaceae, Cestrum and Brugmansia represent cases of convergent evolution of fleshy and dry fruits, respectively. Here we study the anatomical and genetic bases of the independent origin of fleshy fruits in Cestrum and the reversion to dry dehiscent fruits in Brugmansia. We also characterize the expression of candidate fruit development genes, including ALCATRAZ/SPATULA, FRUITFULL, HECATE1/2/3, REPLUMLESS and SHATTERPROOF. We identify anatomical changes to establish developmental stages in the ovary-to-fruit transition in Cestrum nocturnum and Brugmansia suaveolens. We generate reference transcriptomes for both species, isolate homologs for all genes in the fruit genetic regulatory network (GRN) and perform gene expression analyses for ALC/SPT, FUL, HEC1/2/3, RPL and SHP throughout fruit development. Finally, we compare our results to expression patterns found in typical capsules of Nicotiana tabacum and berries of Solanum lycopersicum available in public repositories. We have identified homologous, homoplasious and unique anatomical features in C. nocturnum and B. suaveolens fruits, resulting in their final appearance. Expression patterns suggest that FUL, SHP and SPT might control homologous characteristics, while ALC and RPL likely contribute to homoplasious anatomical features. The convergent anatomical features in Cestrum and Brugmansia fruits are likely the result of changes in ALC and RPL expression patterns. The fruit GRN changes considerably in these genera when compared to typical capsules and berries of Solanaceae, particularly in B. suaveolens, where expression of FUL2 and RPL1 is lacking.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2020-12-07T15:17:21Z
dc.date.available.none.fl_str_mv 2020-12-07T15:17:21Z
dc.date.issued.none.fl_str_mv 2020
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
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dc.type.local.spa.fl_str_mv Artículo de investigación
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dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/17659
url http://hdl.handle.net/10495/17659
dc.language.iso.spa.fl_str_mv eng
language eng
dc.rights.*.fl_str_mv Atribución-NoComercial-SinDerivadas 2.5 Colombia (CC BY-NC-ND 2.5 CO)
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dc.format.extent.spa.fl_str_mv 21
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.place.spa.fl_str_mv Medellín, Colombia
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/9/HernandezNatali_2020_GeneticaAnatomiaFrutos.pdf
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spelling Pabón Mora, NataliaHernández Ciro, Natalí2020-12-07T15:17:21Z2020-12-07T15:17:21Z2020http://hdl.handle.net/10495/17659ABSTRACT: The mechanisms controlling evolutionary shifts between dry and fleshy fruits in angiosperms are poorly understood. In Solanaceae, Cestrum and Brugmansia represent cases of convergent evolution of fleshy and dry fruits, respectively. Here we study the anatomical and genetic bases of the independent origin of fleshy fruits in Cestrum and the reversion to dry dehiscent fruits in Brugmansia. We also characterize the expression of candidate fruit development genes, including ALCATRAZ/SPATULA, FRUITFULL, HECATE1/2/3, REPLUMLESS and SHATTERPROOF. We identify anatomical changes to establish developmental stages in the ovary-to-fruit transition in Cestrum nocturnum and Brugmansia suaveolens. We generate reference transcriptomes for both species, isolate homologs for all genes in the fruit genetic regulatory network (GRN) and perform gene expression analyses for ALC/SPT, FUL, HEC1/2/3, RPL and SHP throughout fruit development. Finally, we compare our results to expression patterns found in typical capsules of Nicotiana tabacum and berries of Solanum lycopersicum available in public repositories. We have identified homologous, homoplasious and unique anatomical features in C. nocturnum and B. suaveolens fruits, resulting in their final appearance. Expression patterns suggest that FUL, SHP and SPT might control homologous characteristics, while ALC and RPL likely contribute to homoplasious anatomical features. The convergent anatomical features in Cestrum and Brugmansia fruits are likely the result of changes in ALC and RPL expression patterns. The fruit GRN changes considerably in these genera when compared to typical capsules and berries of Solanaceae, particularly in B. suaveolens, where expression of FUL2 and RPL1 is lacking.RESUMEN: Los mecanismos que controlan las transiciones evolutivas entre frutos secos y carnosos en las angiospermas son probremente conocidos. En las Solanaceae, Cestrum y Brugmansia representan casos de evolución convergente de frutos carnosos y secos, respectivamente. En este trabajo estudiamos las bases anatómicas y genéticas del origen independiente de frutos carnosos en Cestrum y la reversión a frutos secos dehiscentes en Brugmansia. También caracterizamos la expresión de genes candidatos de desarrollo del fruto incluyendo ALCATRAZ/SPATULA, FRUITFULL, HECATE1/2/3, REPLUMLESS y SHATTERPROOF. Identificamos los cambios anatómicos y establecimos etapas de desarrollo en la transición ovario-fruto en Cestrum nocturnum y Brugmansia suaveolens. Generamos transcriptomas de referencia para ambas especies, aislamos los homólogos de todos los genes de la red genética que controla el desarrollo de frutos (GRN) y realizamos análisis de expresión de genes para ALC/SPT, FUL, HEC1/2/3, RPL y SHP a lo largo del desarrollo del fruto. Finalmente, comparamos nuestros resultados con los patrones de expresión encontrados en cápsulas típicas de Nicotiana tabacum y bayas de Solanum lycopersicum disponibles en repositorios públicos. Identificamos características anatómicas homólogas, homoplásicas y únicas en los frutos de C. nocturnum y B. suaveolens que resultan en su apariencia final. Los patrones de expresión sugieren que FUL, SHP, SPT y RPL controlan características homólogas mientras que ALC podría contribuir a las características anatómicas homoplásicas. Las características anatómicas convergentes en los frutos de Cestrum y Brugmansia podrían resultar de cambios en los patrones de expresión de ALC. La GRN de frutos cambia considerablemente en estos géneros en comparación a cápsulas y bayas típicas de Solanaceae, particularmente en B. suaveolens donde no hay expresión de FUL2 y de RPL1.21application/pdfenginfo:eu-repo/semantics/draftinfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_b1a7d7d4d402bcceAtribución-NoComercial-SinDerivadas 2.5 Colombia (CC BY-NC-ND 2.5 CO)info:eu-repo/semantics/embargoedAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_f1cfhttps://creativecommons.org/licenses/by-nc-nd/4.0/Anatomical and genetic bases underlying convergent evolution of fleshy and dry dehiscent fruits in Cestrum and Brugmansia (Solanaceae)Bases genéticas y anatómicas de la evolución convergente de frutos carnosos y secos dehiscentes en Cestrum y Brugmansia (Solanaceae)Medellín, ColombiaBayasBerriesVariación (Botánica)Botany - VariationAnatomía de las frutasFruit - AnatomyFilogenia (Botánica)Plants - PhylogenySolanaceaeCestrumBrugmansiaFrutos secosNutshttp://aims.fao.org/aos/agrovoc/c_7215http://aims.fao.org/aos/agrovoc/c_34591http://aims.fao.org/aos/agrovoc/c_ae2cc043http://aims.fao.org/aos/agrovoc/c_12873BiólogaPregradoFacultad de Ciencias Exactas y Naturales. Carrera de BiologíaUniversidad de AntioquiaORIGINALHernandezNatali_2020_GeneticaAnatomiaFrutos.pdfHernandezNatali_2020_GeneticaAnatomiaFrutos.pdfArtículo de investigaciónapplication/pdf93159547http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/9/HernandezNatali_2020_GeneticaAnatomiaFrutos.pdffc10b841b26f94d832be46df13b2ee1aMD59Suplementario.pdfSuplementario.pdfAnexoapplication/pdf15689886http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/3/Suplementario.pdf9ded4b0e4e5f78a190240dfde37b0236MD53TablaSuplementaria1.pdfTablaSuplementaria1.pdfAnexoapplication/pdf249432http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/6/TablaSuplementaria1.pdf1d81e71d0c972ceebfacbbc6f95707f8MD56TablaSuplementaria2.pdfTablaSuplementaria2.pdfAnexoapplication/pdf66276http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/5/TablaSuplementaria2.pdf8ce1757a2c30969fe75cad46633f4032MD55CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-81051http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/7/license_rdfe2060682c9c70d4d30c83c51448f4eedMD57LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/17659/11/license.txt8a4605be74aa9ea9d79846c1fba20a33MD51110495/17659oai:bibliotecadigital.udea.edu.co:10495/176592022-04-06 13:03:21.121Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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