Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits

Autores:: Madrid G, Stephania
López H, Albeiro
Echeverri Z, Julián

Tipo de recurso:: Article of journal

Fecha de publicación:: 2015

Institución:: Universidad de Córdoba

Repositorio:: Repositorio Institucional Unicórdoba

Idioma:: spa

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dc.title.spa.fl_str_mv	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
dc.title.translated.eng.fl_str_mv	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
title	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
spellingShingle	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits Dairy cattle polymorphism population genetic SNP-RFLP
title_short	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
title_full	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
title_fullStr	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
title_full_unstemmed	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
title_sort	Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits
dc.creator.fl_str_mv	Madrid G, Stephania López H, Albeiro Echeverri Z, Julián
dc.contributor.author.spa.fl_str_mv	Madrid G, Stephania López H, Albeiro Echeverri Z, Julián
dc.subject.spa.fl_str_mv	Dairy cattle polymorphism population genetic SNP-RFLP
topic	Dairy cattle polymorphism population genetic SNP-RFLP
publishDate	2015
dc.date.accessioned.none.fl_str_mv	2015-11-13 00:00:00 2022-06-17T20:07:36Z
dc.date.available.none.fl_str_mv	2015-11-13 00:00:00 2022-06-17T20:07:36Z
dc.date.issued.none.fl_str_mv	2015-11-13
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dc.relation.references.spa.fl_str_mv	Boichard D, Maignel L, Verrier E. The value of using probabilities of gene origin to measure genetic variability in a population. Genet Sel Evol 1997; 29:5–23. http://dx.doi.org/10.1186/1297-9686-29-1-5 Muasya T, Peters K, Kahi A. Breeding structure and genetic variability of the Hosltein Friesian dairy cattle population in Kenia. Anim Genet Resour 2013; 52:127–132. http://dx.doi.org/10.1017/S2078633613000039 Deb R, Chakraborty S, Singh U. Molecular Markers and Their Application in Livestock Genomic Research. J Vet Sci Technol 2012; 3(2):7579. http://dx.doi.org/10.4172/2157-7579.1000e108 http://dx.doi.org/10.4172/2157-7579.1000e106 Rincón JC, López A. Echeverri JJ. Estructura y diversidad genética en vacas Holstein de Antioquia usando un polimorFISmo del gen bGH. Rev. MVZ Córdoba 2013; 18(1):3346–3354. Tang KQ, Li SJ, Yang WC, Yu JN, Han L, Li X et al. An MspI polymorphism in the inhibin alpha gene and its associations with superovulation traits in Chinese Holstein cows. Mol Biol Rep 2011; 38(1):17–21. http://dx.doi.org/10.1007/s11033-010-0072-8 National Center for Biotechnology information. Reference SNP (refSNP) Cluster Report rs41257116. 2013. Disponible en: http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=41257116 Sang L, Du QZ, Yang WC, Tang KQ, Yu JN, Hua G et al. Polymorphisms in follicle stimulation hormone receptor, inhibin alpha, inhibin beta A, and prolactin genes, and their association with sperm quality in Chinese Holstein bulls. Anim Reprod Sci 2011; 126(3-4):151–156. http://dx.doi.org/10.1016/j.anireprosci.2011.04.023 National Center for Biotechnology information. Reference SNP (refSNP) Cluster Report rs43676359. 2013. Disponible en: http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=43676359. Yang WC, Li SJ, Tang KQ, Hua GH, Zhang CY, Yu JN et al. Polymorphisms in the 5' upstream region of the FSH receptor gene, and their association with superovulation traits in Chinese Holstein cows. Anim Reprod Sci 2010; 119(3-4):172–177. http://dx.doi.org/10.1016/j.anireprosci.2010.02.004 Miller S, Dykes D, Polesky H. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 1988; 16(3):1215. http://dx.doi.org/10.1093/nar/16.3.1215 Nielsen R, Slatkin M. An Introduction to Population Genetics. Theory and Applications. Sunderland, Massachussets. USA: Sinauer Associates, Inc. Publishiers, 2013, p. 287. Peakall R, Smouse PE. GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update. Bioinformatics 2012; 28(19):2537–2539. http://dx.doi.org/10.1093/bioinformatics/bts460 Pi-ero D, Barahona A, Eguiarte L, Rocha A, Salas R. La variabilidad genética de las especies: aspectos conceptuales y sus aplicaciones y perspectivas en México. En: Díaz P, Morales E, Zizumbo-Villarreal D, editores. Capital Natural de México. México; 2008; p. 415–435. Hall B. Building phylogenetic trees from molecular data with MEGA. Mol Biol Evol 2013; 30(5):1229-1235 http://dx.doi.org/10.1093/molbev/mst012 Rodríguez-Zas SL, Gianola D, Shook GE. Evaluation of models for somatic cell score lactation patterns in Holsteins. Livest Prod Sci 2000; 67(1-2):19–30. http://dx.doi.org/10.1016/S0301-6226(00)00193-7 SAS Institute Inc., Cary, NC, USA, 2009. Rodríguez N, López A, Echeverri JJ. Diversidad Genética de un PolimorFISmo del Gen de Lactoferrina Bovino (LTF) en una Población de Vacas Holstein de Colombia y su Asociación con Componentes de la Leche (Resultados Preliminares). Actas Iberoam Conserv Anim 2011; 1(1):151–153. Hartl DL, Clark AG. Principles of population genetics. 4th ed. Sunderland, Massachusetts: Sinauer Associates, Inc. Publishiers, 2007. Rodríguez N, López A, Echeverri JJ. Estructura genética poblacional del gen lactoferrina bovino en vacas Holstein del departamento de Antioquia. Rev MVZ Córdoba 2013; 18(1):3355–3361. Echeverri JJ, Salazar V, Parra JE. Análisis comparativo de los grupos genéticos Holstein, Jersey y algunos de sus cruces en un hato lechero del Norte de Antioquia en Colombia. Zootec Trop 2011; 29(1):49–59. Corrales J, Cerón-Mu-oz M, Ca-as J, Herrera C, Calvo S. Parámetros genéticos de características de tipo y producción en ganado Holstein del departamento de Antioquia. Rev MVZ Córdoba 2011; 17(1):2870–2877. Madrid S, Echeverri JJ. Association Between Conformation Traits and Reproductive Traits in Holstein Cows in the Department of Antioquia – Colombia. Rev Fac Nac Agron Medellín 2014; 67(2):7311–7319. http://dx.doi.org/10.15446/rfnam.v67n2.44174
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spelling	Madrid G, Stephania0ba3cf26-f457-45e0-b948-f1af9633568b-1López H, Albeirobab4af92-d594-4c35-a698-8d5388077bd8-1Echeverri Z, Julián12623fbf-78be-4bfd-8bcc-3828a9580cdd-12015-11-13 00:00:002022-06-17T20:07:36Z2015-11-13 00:00:002022-06-17T20:07:36Z2015-11-130122-0268https://repositorio.unicordoba.edu.co/handle/ucordoba/522410.21897/rmvz.12https://doi.org/10.21897/rmvz.121909-0544application/pdftext/htmlspaUniversidad de Córdobahttps://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2https://revistamvz.unicordoba.edu.co/article/view/12Dairy cattlepolymorphismpopulation geneticSNP-RFLPGenetic structure of Antioquia Holstein from two SNPs and association with dairy traitsGenetic structure of Antioquia Holstein from two SNPs and association with dairy traitsArtículo de revistaJournal articleinfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/publishedVersionTexthttp://purl.org/redcol/resource_type/ARTREFhttp://purl.org/coar/version/c_970fb48d4fbd8a85Boichard D, Maignel L, Verrier E. The value of using probabilities of gene origin to measure genetic variability in a population. Genet Sel Evol 1997; 29:5–23. http://dx.doi.org/10.1186/1297-9686-29-1-5Muasya T, Peters K, Kahi A. Breeding structure and genetic variability of the Hosltein Friesian dairy cattle population in Kenia. Anim Genet Resour 2013; 52:127–132. http://dx.doi.org/10.1017/S2078633613000039Deb R, Chakraborty S, Singh U. Molecular Markers and Their Application in Livestock Genomic Research. J Vet Sci Technol 2012; 3(2):7579. http://dx.doi.org/10.4172/2157-7579.1000e108 http://dx.doi.org/10.4172/2157-7579.1000e106Rincón JC, López A. Echeverri JJ. Estructura y diversidad genética en vacas Holstein de Antioquia usando un polimorFISmo del gen bGH. Rev. MVZ Córdoba 2013; 18(1):3346–3354.Tang KQ, Li SJ, Yang WC, Yu JN, Han L, Li X et al. An MspI polymorphism in the inhibin alpha gene and its associations with superovulation traits in Chinese Holstein cows. Mol Biol Rep 2011; 38(1):17–21. http://dx.doi.org/10.1007/s11033-010-0072-8National Center for Biotechnology information. Reference SNP (refSNP) Cluster Report rs41257116. 2013. Disponible en: http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=41257116Sang L, Du QZ, Yang WC, Tang KQ, Yu JN, Hua G et al. Polymorphisms in follicle stimulation hormone receptor, inhibin alpha, inhibin beta A, and prolactin genes, and their association with sperm quality in Chinese Holstein bulls. Anim Reprod Sci 2011; 126(3-4):151–156. http://dx.doi.org/10.1016/j.anireprosci.2011.04.023National Center for Biotechnology information. Reference SNP (refSNP) Cluster Report rs43676359. 2013. Disponible en: http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=43676359.Yang WC, Li SJ, Tang KQ, Hua GH, Zhang CY, Yu JN et al. Polymorphisms in the 5' upstream region of the FSH receptor gene, and their association with superovulation traits in Chinese Holstein cows. Anim Reprod Sci 2010; 119(3-4):172–177. http://dx.doi.org/10.1016/j.anireprosci.2010.02.004Miller S, Dykes D, Polesky H. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 1988; 16(3):1215. http://dx.doi.org/10.1093/nar/16.3.1215Nielsen R, Slatkin M. An Introduction to Population Genetics. Theory and Applications. Sunderland, Massachussets. USA: Sinauer Associates, Inc. Publishiers, 2013, p. 287.Peakall R, Smouse PE. GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update. Bioinformatics 2012; 28(19):2537–2539. http://dx.doi.org/10.1093/bioinformatics/bts460Pi-ero D, Barahona A, Eguiarte L, Rocha A, Salas R. La variabilidad genética de las especies: aspectos conceptuales y sus aplicaciones y perspectivas en México. En: Díaz P, Morales E, Zizumbo-Villarreal D, editores. Capital Natural de México. México; 2008; p. 415–435.Hall B. Building phylogenetic trees from molecular data with MEGA. Mol Biol Evol 2013; 30(5):1229-1235 http://dx.doi.org/10.1093/molbev/mst012Rodríguez-Zas SL, Gianola D, Shook GE. Evaluation of models for somatic cell score lactation patterns in Holsteins. Livest Prod Sci 2000; 67(1-2):19–30. http://dx.doi.org/10.1016/S0301-6226(00)00193-7SAS Institute Inc., Cary, NC, USA, 2009.Rodríguez N, López A, Echeverri JJ. Diversidad Genética de un PolimorFISmo del Gen de Lactoferrina Bovino (LTF) en una Población de Vacas Holstein de Colombia y su Asociación con Componentes de la Leche (Resultados Preliminares). Actas Iberoam Conserv Anim 2011; 1(1):151–153.Hartl DL, Clark AG. Principles of population genetics. 4th ed. Sunderland, Massachusetts: Sinauer Associates, Inc. Publishiers, 2007.Rodríguez N, López A, Echeverri JJ. Estructura genética poblacional del gen lactoferrina bovino en vacas Holstein del departamento de Antioquia. Rev MVZ Córdoba 2013; 18(1):3355–3361.Echeverri JJ, Salazar V, Parra JE. Análisis comparativo de los grupos genéticos Holstein, Jersey y algunos de sus cruces en un hato lechero del Norte de Antioquia en Colombia. Zootec Trop 2011; 29(1):49–59.Corrales J, Cerón-Mu-oz M, Ca-as J, Herrera C, Calvo S. Parámetros genéticos de características de tipo y producción en ganado Holstein del departamento de Antioquia. Rev MVZ Córdoba 2011; 17(1):2870–2877.Madrid S, Echeverri JJ. Association Between Conformation Traits and Reproductive Traits in Holstein Cows in the Department of Antioquia – Colombia. Rev Fac Nac Agron Medellín 2014; 67(2):7311–7319. http://dx.doi.org/10.15446/rfnam.v67n2.44174https://revistamvz.unicordoba.edu.co/article/download/12/23https://revistamvz.unicordoba.edu.co/article/download/12/24Núm. supl , Año 2015 : Revista MVZ Córdoba Volumen 20(Supl) Diciembre 20154988supl497420Revista MVZ CórdobaPublicationOREORE.xmltext/xml2604https://repositorio.unicordoba.edu.co/bitstreams/c27e3c52-7915-4f5a-b443-aa559c772537/download9f4c6917a078b614b3ee0c7aaa6b479aMD51ucordoba/5224oai:repositorio.unicordoba.edu.co:ucordoba/52242023-10-06 00:47:01.729https://creativecommons.org/licenses/by-nc-sa/4.0/metadata.onlyhttps://repositorio.unicordoba.edu.coRepositorio Universidad de Córdobabdigital@metabiblioteca.com

Genetic structure of Antioquia Holstein from two SNPs and association with dairy traits

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