A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium

The objective of this research was to develop a machine vision system using image processing and statistical modeling techniques to identify and enumerate bacteria on slides containing Salmonella typhimurium. Pictures of bacterial cells were acquired with a CCD camera attached to a motorized fluores...

Full description

Autores:
Trujillo, O.
Griffis, C. L.
Li, Y.
Slavik, M. F.
Tipo de recurso:
Article of journal
Fecha de publicación:
2013
Institución:
Universidad Antonio Nariño
Repositorio:
Repositorio UAN
Idioma:
spa
OAI Identifier:
oai:repositorio.uan.edu.co:123456789/3913
Acceso en línea:
http://revistas.uan.edu.co/index.php/ingeuan/article/view/333
http://repositorio.uan.edu.co/handle/123456789/3913
Palabra clave:
Bacteria detection
fluorescence microscopy
machine vision
image analysis
pattern recognition
Rights
openAccess
License
Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
id UAntonioN2_f279967ebf203837c955901422bebb1d
oai_identifier_str oai:repositorio.uan.edu.co:123456789/3913
network_acronym_str UAntonioN2
network_name_str Repositorio UAN
repository_id_str
spelling Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)Acceso abiertohttps://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Trujillo, O.Griffis, C. L.Li, Y.Slavik, M. F.2021-06-16T13:53:01Z2021-06-16T13:53:01Z2013-05-14http://revistas.uan.edu.co/index.php/ingeuan/article/view/333http://repositorio.uan.edu.co/handle/123456789/3913The objective of this research was to develop a machine vision system using image processing and statistical modeling techniques to identify and enumerate bacteria on slides containing Salmonella typhimurium. Pictures of bacterial cells were acquired with a CCD camera attached to a motorized fluorescence microscope. A shape boundary modeling technique, based on the use of circular autoregressive model parameters, was used. A feature weighting classifier was trained with ten images belonging to each shape class (rod shape and circle shape). In order to enhance the discrimination of circular shapes, a size range was added to the recognition algorithm. Experimental results showed that the model parameters could be used as descriptors of shape boundaries detected in digitized binary images of bacterial cells. The introduction of the rotated coordinate method and the circular size restriction, reduced the differences between automated and manual recognition/enumeration from 7% to less than 1%. The computer analyzed each image in approximately 5 s (a total of 2 h including sample preparation), while the bacteriologist spent an average of 1 min for each image.The objective of this research was to develop a machine vision system using image processing and statistical modeling techniques to identify and enumerate bacteria on slides containing Salmonella typhimurium. Pictures of bacterial cells were acquired with a CCD camera attached to a motorized fluorescence microscope. A shape boundary modeling technique, based on the use of circular autoregressive model parameters, was used. A feature weighting classifier was trained with ten images belonging to each shape class (rod shape and circle shape). In order to enhance the discrimination of circular shapes, a size range was added to the recognition algorithm. Experimental results showed that the model parameters could be used as descriptors of shape boundaries detected in digitized binary images of bacterial cells. The introduction of the rotated coordinate method and the circular size restriction, reduced the differences between automated and manual recognition/enumeration from 7% to less than 1%. The computer analyzed each image in approximately 5 s (a total of 2 h including sample preparation), while the bacteriologist spent an average of 1 min for each image.application/pdfspaUniversidad Antonio Nariñohttp://revistas.uan.edu.co/index.php/ingeuan/article/view/333/2792346-14462145-0935INGE@UAN - TENDENCIAS EN LA INGENIERÍA; Vol. 2 Núm. 4 (2012)Bacteria detectionfluorescence microscopymachine visionimage analysispattern recognitionA machine vision system using circular autoregressive models for rapid recognition of salmonella typhimuriumA machine vision system using circular autoregressive models for rapid recognition of salmonella typhimuriuminfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a85123456789/3913oai:repositorio.uan.edu.co:123456789/39132024-10-09 22:54:59.263https://creativecommons.org/licenses/by-nc-sa/4.0/Acceso abiertometadata.onlyhttps://repositorio.uan.edu.coRepositorio Institucional UANalertas.repositorio@uan.edu.co
dc.title.en-US.fl_str_mv A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
dc.title.es-ES.fl_str_mv A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
title A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
spellingShingle A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
Bacteria detection
fluorescence microscopy
machine vision
image analysis
pattern recognition
title_short A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
title_full A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
title_fullStr A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
title_full_unstemmed A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
title_sort A machine vision system using circular autoregressive models for rapid recognition of salmonella typhimurium
dc.creator.fl_str_mv Trujillo, O.
Griffis, C. L.
Li, Y.
Slavik, M. F.
dc.contributor.author.spa.fl_str_mv Trujillo, O.
Griffis, C. L.
Li, Y.
Slavik, M. F.
dc.subject.en-US.fl_str_mv Bacteria detection
fluorescence microscopy
machine vision
image analysis
pattern recognition
topic Bacteria detection
fluorescence microscopy
machine vision
image analysis
pattern recognition
description The objective of this research was to develop a machine vision system using image processing and statistical modeling techniques to identify and enumerate bacteria on slides containing Salmonella typhimurium. Pictures of bacterial cells were acquired with a CCD camera attached to a motorized fluorescence microscope. A shape boundary modeling technique, based on the use of circular autoregressive model parameters, was used. A feature weighting classifier was trained with ten images belonging to each shape class (rod shape and circle shape). In order to enhance the discrimination of circular shapes, a size range was added to the recognition algorithm. Experimental results showed that the model parameters could be used as descriptors of shape boundaries detected in digitized binary images of bacterial cells. The introduction of the rotated coordinate method and the circular size restriction, reduced the differences between automated and manual recognition/enumeration from 7% to less than 1%. The computer analyzed each image in approximately 5 s (a total of 2 h including sample preparation), while the bacteriologist spent an average of 1 min for each image.
publishDate 2013
dc.date.issued.spa.fl_str_mv 2013-05-14
dc.date.accessioned.none.fl_str_mv 2021-06-16T13:53:01Z
dc.date.available.none.fl_str_mv 2021-06-16T13:53:01Z
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.none.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
format http://purl.org/coar/resource_type/c_6501
status_str publishedVersion
dc.identifier.none.fl_str_mv http://revistas.uan.edu.co/index.php/ingeuan/article/view/333
dc.identifier.uri.none.fl_str_mv http://repositorio.uan.edu.co/handle/123456789/3913
url http://revistas.uan.edu.co/index.php/ingeuan/article/view/333
http://repositorio.uan.edu.co/handle/123456789/3913
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv http://revistas.uan.edu.co/index.php/ingeuan/article/view/333/279
dc.rights.none.fl_str_mv Acceso abierto
dc.rights.license.spa.fl_str_mv Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
Acceso abierto
https://creativecommons.org/licenses/by-nc-sa/4.0/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad Antonio Nariño
dc.source.none.fl_str_mv 2346-1446
2145-0935
dc.source.es-ES.fl_str_mv INGE@UAN - TENDENCIAS EN LA INGENIERÍA; Vol. 2 Núm. 4 (2012)
institution Universidad Antonio Nariño
repository.name.fl_str_mv Repositorio Institucional UAN
repository.mail.fl_str_mv alertas.repositorio@uan.edu.co
_version_ 1814300358590070784