Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex s...
- Autores:
-
Arenas Soto, Ailan Farid
- Tipo de recurso:
- Doctoral thesis
- Fecha de publicación:
- 2017
- Institución:
- Universidad del Quindío
- Repositorio:
- Repositorio Universidad del Quindío
- Idioma:
- spa
- OAI Identifier:
- oai:bdigital.uniquindio.edu.co:001/4191
- Acceso en línea:
- https://bdigital.uniquindio.edu.co/handle/001/4191
- Palabra clave:
- Toxoplasma gondii
ROP5
Pull-down
GBP5
Interacción proteína-proteína
- Rights
- closedAccess
- License
- Derechos Reservados - Universidad del Quindío
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dc.title.spa.fl_str_mv |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
title |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
spellingShingle |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii Toxoplasma gondii ROP5 Pull-down GBP5 Interacción proteína-proteína |
title_short |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
title_full |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
title_fullStr |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
title_full_unstemmed |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
title_sort |
Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii |
dc.creator.fl_str_mv |
Arenas Soto, Ailan Farid |
dc.contributor.advisor.spa.fl_str_mv |
Universidad del Quindío - Colombia - Director - Jorge Enrique Gómez Marín, MD, PhD |
dc.contributor.author.spa.fl_str_mv |
Arenas Soto, Ailan Farid |
dc.subject.proposal.spa.fl_str_mv |
Toxoplasma gondii ROP5 Pull-down GBP5 Interacción proteína-proteína |
topic |
Toxoplasma gondii ROP5 Pull-down GBP5 Interacción proteína-proteína |
description |
Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex specifically phosphorylates interferon-induced GTPases (IRGs). There is no evidence whether this complex or other ROP kinases are involved in the development of human toxoplasmosis. Aim: To search human substrates for Toxoplasma gondii ROP11, ROP39 ROP5 and ROP18 in a human cell line. Methodology 1a: We designed an algorithm called MSCA (Multiple Spectral Comparison Alignment) for the search of interactions between proteins (Toxoplasma and Human). 2a: recombinant proteins ROP11, ROP39, and GBP5 were cloned into pGEX4T1 and expressed in E. coli ROSSETTA DE3; with these proteins we performed Pull-down assays either with mass spectrometry (MS) or Western blot (WB). 2b: yeast 2 hybrids (Y2H) protein-protein interaction screening was performed between some ROPs and human GBPs 1-5. 2c: pro-IL1β levels were compared in human PBMCs infected ex-vivo with Toxoplasmas RH or RHΔROP18. Results 1a: MSCA proposed the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5, and hGBP5-ROP18. 2a the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, and ROP39-ROP5 were confirmed by Pull-down MS. 2b: the interactions hGBP5-ROP18 and hGBP5-ROP5 were observed in the yeast 2 hibrid (Y2H) screening interaction. The interactions ROP39-ROP5 and hGBP5-ROP5 were confirmed by Pull-down-WB. 2c: we observed a greater amount of pro-IL1β in human cells infected with RHΔROP18 than RH. Conclusions: ROP39-ROP5 and hGBP5-ROP5 interactions were confirmed by two different techniques. We model that ROP5 interacts with human GBP5 and this interaction could alter the activation of the NLRP3-inflamosome in human PBMCs in a ROP18-dependent manner. |
publishDate |
2017 |
dc.date.issued.spa.fl_str_mv |
2017-09 |
dc.date.accessioned.spa.fl_str_mv |
2018-03-14T16:07:52Z |
dc.date.available.spa.fl_str_mv |
2018-03-14T16:07:52Z |
dc.type.spa.fl_str_mv |
Trabajo de grado - Doctorado |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_db06 |
dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/draft |
dc.type.content.spa.fl_str_mv |
Text |
dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/TD |
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http://purl.org/coar/version/c_b1a7d7d4d402bcce |
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http://purl.org/coar/resource_type/c_db06 |
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draft |
dc.identifier.uri.spa.fl_str_mv |
https://bdigital.uniquindio.edu.co/handle/001/4191 |
url |
https://bdigital.uniquindio.edu.co/handle/001/4191 |
dc.language.iso.spa.fl_str_mv |
spa |
language |
spa |
dc.rights.spa.fl_str_mv |
Derechos Reservados - Universidad del Quindío |
dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/closedAccess |
dc.rights.creativecommons.spa.fl_str_mv |
Atribución 4.0 Internacional (CC BY 4.0) |
dc.rights.coar.spa.fl_str_mv |
http://purl.org/coar/access_right/c_14cb |
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Derechos Reservados - Universidad del Quindío https://creativecommons.org/licenses/by/4.0/ Atribución 4.0 Internacional (CC BY 4.0) http://purl.org/coar/access_right/c_14cb |
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closedAccess |
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application/pdf |
dc.publisher.faculty.spa.fl_str_mv |
Ciencias de la Salud - Doctorado en Ciencias Biomédicas |
institution |
Universidad del Quindío |
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Universidad del Quindío - Colombia - Director - Jorge Enrique Gómez Marín, MD, PhDArenas Soto, Ailan Farid2018-03-14T16:07:52Z2018-03-14T16:07:52Z2017-09https://bdigital.uniquindio.edu.co/handle/001/4191Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex specifically phosphorylates interferon-induced GTPases (IRGs). There is no evidence whether this complex or other ROP kinases are involved in the development of human toxoplasmosis. Aim: To search human substrates for Toxoplasma gondii ROP11, ROP39 ROP5 and ROP18 in a human cell line. Methodology 1a: We designed an algorithm called MSCA (Multiple Spectral Comparison Alignment) for the search of interactions between proteins (Toxoplasma and Human). 2a: recombinant proteins ROP11, ROP39, and GBP5 were cloned into pGEX4T1 and expressed in E. coli ROSSETTA DE3; with these proteins we performed Pull-down assays either with mass spectrometry (MS) or Western blot (WB). 2b: yeast 2 hybrids (Y2H) protein-protein interaction screening was performed between some ROPs and human GBPs 1-5. 2c: pro-IL1β levels were compared in human PBMCs infected ex-vivo with Toxoplasmas RH or RHΔROP18. Results 1a: MSCA proposed the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5, and hGBP5-ROP18. 2a the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, and ROP39-ROP5 were confirmed by Pull-down MS. 2b: the interactions hGBP5-ROP18 and hGBP5-ROP5 were observed in the yeast 2 hibrid (Y2H) screening interaction. The interactions ROP39-ROP5 and hGBP5-ROP5 were confirmed by Pull-down-WB. 2c: we observed a greater amount of pro-IL1β in human cells infected with RHΔROP18 than RH. Conclusions: ROP39-ROP5 and hGBP5-ROP5 interactions were confirmed by two different techniques. We model that ROP5 interacts with human GBP5 and this interaction could alter the activation of the NLRP3-inflamosome in human PBMCs in a ROP18-dependent manner.RESUMEN Introducción: Toxoplasma secreta unas proteínas conocidas como ROP cinasas; (ROPs) las cuales son importantes para establecer la supervivencia y el crecimiento del parásito en el interior de la célula hospedera. Se ha evidenciado que el complejo ROP5/ROP18 secretado por Toxoplasma, es el mayor efector relacionado con virulencia en ratones; este complejo fosforila específicamente proteínas GTPasas inducidas por interferón (IRGs). No hay evidencia si este complejo u otras ROP cinasas están implicadas en el desarrollo de la toxoplasmosis humana. Objetivo: Evidenciar sustratos humanos para las proteínas cinasas ROP11, ROP39 ROP5 y ROP18 de Toxoplasma gondii en una línea celular humana. Metodología 1a: diseñamos un algoritmo llamado MSCA (Multiple Spectral Comparison Alignment) para la búsqueda de interacciones entre proteínas (Toxoplasma y Humano). 2a: las proteínas recombinantes ROP11, ROP39, y GBP5 se clonaron en pGEX4T1 y se expresaron en E. coli ROSSETTA DE3; con estas proteínas se realizaron ensayos de Pull-down Mass spectrometry (MS) y Pull-down Western blot (WB). 2b: utilizando el sistema de 2 híbridos en levadura (Y2H) realizamos ensayos de interacción proteína-proteína entre ROPs y GBPs humanas (Guanylate binding proteins). 2c: nosotros comparamos los niveles de pro-IL1β en PBMCs humanos infectados ex-vivo con Toxoplasma cepa RH o RHΔROP18. Resultados 1ª: MSCA propone las interacciones ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5 y hGBP5-ROP18-. 2a: las interacciones ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2 y ROP39-ROP5 fueron confirmadas por Pull-down MS. 2b: observamos las interacciones hGBP5-ROP18 y hGBP5-ROP5- por Y2H. Se confirmaron las interacciones ROP39-ROP5 y ROP5-GBP5 por Pull-down-WB. 2c: Observamos mayor cantidad de pro-IL1β en PBMCs infectadas con RHΔROP18. Conclusiones: las interacciones ROP39-ROP5 y hGBP5-ROP5 fueron confirmadas por 2 técnicas diferentes. Sugerimos que ROP5 interacciona con GBP5 humana y esta interacción podría alterar la activación del inflamosoma dependiente de ROP18 en PBMCs humanos.I. Introducción .............................................................................. 8 II. Marco Conceptual ....................................................................10 III. Planteamiento del Problema.................................................... 23 IV. Objetivo.................................................................................... 25 V. Materiales y Métodos................................................................ 25 VI. Resultados............................................................................... 36DoctoradoDoctor en Ciencias Biomédicasapplication/pdfspaDerechos Reservados - Universidad del Quindíohttps://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/closedAccessAtribución 4.0 Internacional (CC BY 4.0)http://purl.org/coar/access_right/c_14cbIdentificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondiiTrabajo de grado - Doctoradohttp://purl.org/coar/resource_type/c_db06info:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/draftTexthttps://purl.org/redcol/resource_type/TDhttp://purl.org/coar/version/c_b1a7d7d4d402bcceToxoplasma gondiiROP5Pull-downGBP5Interacción proteína-proteínaCiencias de la Salud - Doctorado en Ciencias BiomédicasPublicationTHUMBNAILLicencia Ailan Farid.pdf.jpgLicencia Ailan Farid.pdf.jpgGenerated Thumbnailimage/jpeg12584https://bdigital.uniquindio.edu.co/bitstreams/269712fc-a51a-42c4-93ec-4992036b8115/download39f8b18185e1580f37f58f7b9d767478MD56TESIS AILAN FARID ARENAS.pdf.jpgTESIS AILAN FARID ARENAS.pdf.jpgGenerated Thumbnailimage/jpeg6321https://bdigital.uniquindio.edu.co/bitstreams/586385fd-2b71-44d2-9f6f-e18aeaa98ee0/download371dd9547614effe85db15fb074a01b8MD57TEXTLicencia Ailan Farid.pdf.txtLicencia Ailan Farid.pdf.txtExtracted texttext/plain4https://bdigital.uniquindio.edu.co/bitstreams/a56a2442-4acf-4bd7-bca8-a46db7cb8f6e/downloadff4c8ff01d544500ea4bfea43e6108c1MD54TESIS AILAN FARID ARENAS.pdf.txtTESIS AILAN FARID ARENAS.pdf.txtExtracted texttext/plain155875https://bdigital.uniquindio.edu.co/bitstreams/aeebcfeb-f90b-46d1-81ba-32d2483740e7/download7e10406bbd3e616d6c76e1b7b6b23766MD55LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bdigital.uniquindio.edu.co/bitstreams/e7c96715-e221-416f-989a-9bbb5deabb10/download8a4605be74aa9ea9d79846c1fba20a33MD53ORIGINALLicencia Ailan Farid.pdfLicencia Ailan Farid.pdfapplication/pdf1951569https://bdigital.uniquindio.edu.co/bitstreams/f6107548-18fc-4ff5-9437-b088d28c9879/downloadd74ba25eb21ff4613339656ff1f13e72MD51TESIS AILAN FARID ARENAS.pdfTESIS AILAN FARID ARENAS.pdfapplication/pdf2672729https://bdigital.uniquindio.edu.co/bitstreams/756f99e2-f84c-4ada-af8d-282aa6966df4/downloaddc9fb42ae901a13e9ffd855d6ba4f916MD52001/4191oai:bdigital.uniquindio.edu.co:001/41912024-06-07 11:19:51.319https://creativecommons.org/licenses/by/4.0/Derechos Reservados - Universidad del Quindíorestrictedhttps://bdigital.uniquindio.edu.coBiblioteca Digital Universidad del Quindíobdigital@metabiblioteca.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 |