Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii

Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex s...

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Autores:
Arenas Soto, Ailan Farid
Tipo de recurso:
Doctoral thesis
Fecha de publicación:
2017
Institución:
Universidad del Quindío
Repositorio:
Repositorio Universidad del Quindío
Idioma:
spa
OAI Identifier:
oai:bdigital.uniquindio.edu.co:001/4191
Acceso en línea:
https://bdigital.uniquindio.edu.co/handle/001/4191
Palabra clave:
Toxoplasma gondii
ROP5
Pull-down
GBP5
Interacción proteína-proteína
Rights
closedAccess
License
Derechos Reservados - Universidad del Quindío
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dc.title.spa.fl_str_mv Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
title Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
spellingShingle Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
Toxoplasma gondii
ROP5
Pull-down
GBP5
Interacción proteína-proteína
title_short Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
title_full Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
title_fullStr Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
title_full_unstemmed Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
title_sort Identificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondii
dc.creator.fl_str_mv Arenas Soto, Ailan Farid
dc.contributor.advisor.spa.fl_str_mv Universidad del Quindío - Colombia - Director - Jorge Enrique Gómez Marín, MD, PhD
dc.contributor.author.spa.fl_str_mv Arenas Soto, Ailan Farid
dc.subject.proposal.spa.fl_str_mv Toxoplasma gondii
ROP5
Pull-down
GBP5
Interacción proteína-proteína
topic Toxoplasma gondii
ROP5
Pull-down
GBP5
Interacción proteína-proteína
description Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex specifically phosphorylates interferon-induced GTPases (IRGs). There is no evidence whether this complex or other ROP kinases are involved in the development of human toxoplasmosis. Aim: To search human substrates for Toxoplasma gondii ROP11, ROP39 ROP5 and ROP18 in a human cell line. Methodology 1a: We designed an algorithm called MSCA (Multiple Spectral Comparison Alignment) for the search of interactions between proteins (Toxoplasma and Human). 2a: recombinant proteins ROP11, ROP39, and GBP5 were cloned into pGEX4T1 and expressed in E. coli ROSSETTA DE3; with these proteins we performed Pull-down assays either with mass spectrometry (MS) or Western blot (WB). 2b: yeast 2 hybrids (Y2H) protein-protein interaction screening was performed between some ROPs and human GBPs 1-5. 2c: pro-IL1β levels were compared in human PBMCs infected ex-vivo with Toxoplasmas RH or RHΔROP18. Results 1a: MSCA proposed the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5, and hGBP5-ROP18. 2a the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, and ROP39-ROP5 were confirmed by Pull-down MS. 2b: the interactions hGBP5-ROP18 and hGBP5-ROP5 were observed in the yeast 2 hibrid (Y2H) screening interaction. The interactions ROP39-ROP5 and hGBP5-ROP5 were confirmed by Pull-down-WB. 2c: we observed a greater amount of pro-IL1β in human cells infected with RHΔROP18 than RH. Conclusions: ROP39-ROP5 and hGBP5-ROP5 interactions were confirmed by two different techniques. We model that ROP5 interacts with human GBP5 and this interaction could alter the activation of the NLRP3-inflamosome in human PBMCs in a ROP18-dependent manner.
publishDate 2017
dc.date.issued.spa.fl_str_mv 2017-09
dc.date.accessioned.spa.fl_str_mv 2018-03-14T16:07:52Z
dc.date.available.spa.fl_str_mv 2018-03-14T16:07:52Z
dc.type.spa.fl_str_mv Trabajo de grado - Doctorado
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dc.language.iso.spa.fl_str_mv spa
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dc.rights.spa.fl_str_mv Derechos Reservados - Universidad del Quindío
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dc.publisher.faculty.spa.fl_str_mv Ciencias de la Salud - Doctorado en Ciencias Biomédicas
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spelling Universidad del Quindío - Colombia - Director - Jorge Enrique Gómez Marín, MD, PhDArenas Soto, Ailan Farid2018-03-14T16:07:52Z2018-03-14T16:07:52Z2017-09https://bdigital.uniquindio.edu.co/handle/001/4191Summary Background: Toxoplasma secretes proteins known as ROP kinases; (ROPs) which are important for establishing the survival and growth of the parasite within the host cell. It has been shown that the Toxoplasma ROP5/ROP18 complex is the major effector related to virulence in mice. This complex specifically phosphorylates interferon-induced GTPases (IRGs). There is no evidence whether this complex or other ROP kinases are involved in the development of human toxoplasmosis. Aim: To search human substrates for Toxoplasma gondii ROP11, ROP39 ROP5 and ROP18 in a human cell line. Methodology 1a: We designed an algorithm called MSCA (Multiple Spectral Comparison Alignment) for the search of interactions between proteins (Toxoplasma and Human). 2a: recombinant proteins ROP11, ROP39, and GBP5 were cloned into pGEX4T1 and expressed in E. coli ROSSETTA DE3; with these proteins we performed Pull-down assays either with mass spectrometry (MS) or Western blot (WB). 2b: yeast 2 hybrids (Y2H) protein-protein interaction screening was performed between some ROPs and human GBPs 1-5. 2c: pro-IL1β levels were compared in human PBMCs infected ex-vivo with Toxoplasmas RH or RHΔROP18. Results 1a: MSCA proposed the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5, and hGBP5-ROP18. 2a the interactions ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, and ROP39-ROP5 were confirmed by Pull-down MS. 2b: the interactions hGBP5-ROP18 and hGBP5-ROP5 were observed in the yeast 2 hibrid (Y2H) screening interaction. The interactions ROP39-ROP5 and hGBP5-ROP5 were confirmed by Pull-down-WB. 2c: we observed a greater amount of pro-IL1β in human cells infected with RHΔROP18 than RH. Conclusions: ROP39-ROP5 and hGBP5-ROP5 interactions were confirmed by two different techniques. We model that ROP5 interacts with human GBP5 and this interaction could alter the activation of the NLRP3-inflamosome in human PBMCs in a ROP18-dependent manner.RESUMEN Introducción: Toxoplasma secreta unas proteínas conocidas como ROP cinasas; (ROPs) las cuales son importantes para establecer la supervivencia y el crecimiento del parásito en el interior de la célula hospedera. Se ha evidenciado que el complejo ROP5/ROP18 secretado por Toxoplasma, es el mayor efector relacionado con virulencia en ratones; este complejo fosforila específicamente proteínas GTPasas inducidas por interferón (IRGs). No hay evidencia si este complejo u otras ROP cinasas están implicadas en el desarrollo de la toxoplasmosis humana. Objetivo: Evidenciar sustratos humanos para las proteínas cinasas ROP11, ROP39 ROP5 y ROP18 de Toxoplasma gondii en una línea celular humana. Metodología 1a: diseñamos un algoritmo llamado MSCA (Multiple Spectral Comparison Alignment) para la búsqueda de interacciones entre proteínas (Toxoplasma y Humano). 2a: las proteínas recombinantes ROP11, ROP39, y GBP5 se clonaron en pGEX4T1 y se expresaron en E. coli ROSSETTA DE3; con estas proteínas se realizaron ensayos de Pull-down Mass spectrometry (MS) y Pull-down Western blot (WB). 2b: utilizando el sistema de 2 híbridos en levadura (Y2H) realizamos ensayos de interacción proteína-proteína entre ROPs y GBPs humanas (Guanylate binding proteins). 2c: nosotros comparamos los niveles de pro-IL1β en PBMCs humanos infectados ex-vivo con Toxoplasma cepa RH o RHΔROP18. Resultados 1ª: MSCA propone las interacciones ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2, ROP39-ROP5, hGBP5-ROP5 y hGBP5-ROP18-. 2a: las interacciones ROP11-SLC3A2, ROP11-ANXA6, ROP39-SHMT2 y ROP39-ROP5 fueron confirmadas por Pull-down MS. 2b: observamos las interacciones hGBP5-ROP18 y hGBP5-ROP5- por Y2H. Se confirmaron las interacciones ROP39-ROP5 y ROP5-GBP5 por Pull-down-WB. 2c: Observamos mayor cantidad de pro-IL1β en PBMCs infectadas con RHΔROP18. Conclusiones: las interacciones ROP39-ROP5 y hGBP5-ROP5 fueron confirmadas por 2 técnicas diferentes. Sugerimos que ROP5 interacciona con GBP5 humana y esta interacción podría alterar la activación del inflamosoma dependiente de ROP18 en PBMCs humanos.I. Introducción .............................................................................. 8 II. Marco Conceptual ....................................................................10 III. Planteamiento del Problema.................................................... 23 IV. Objetivo.................................................................................... 25 V. Materiales y Métodos................................................................ 25 VI. Resultados............................................................................... 36DoctoradoDoctor en Ciencias Biomédicasapplication/pdfspaDerechos Reservados - Universidad del Quindíohttps://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/closedAccessAtribución 4.0 Internacional (CC BY 4.0)http://purl.org/coar/access_right/c_14cbIdentificación de sustratos proteicos en celulas humanas para proteínas ROP cinasas de Toxoplasma gondiiTrabajo de grado - Doctoradohttp://purl.org/coar/resource_type/c_db06info:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/draftTexthttps://purl.org/redcol/resource_type/TDhttp://purl.org/coar/version/c_b1a7d7d4d402bcceToxoplasma gondiiROP5Pull-downGBP5Interacción proteína-proteínaCiencias de la Salud - Doctorado en Ciencias BiomédicasPublicationTHUMBNAILLicencia Ailan Farid.pdf.jpgLicencia Ailan Farid.pdf.jpgGenerated Thumbnailimage/jpeg12584https://bdigital.uniquindio.edu.co/bitstreams/269712fc-a51a-42c4-93ec-4992036b8115/download39f8b18185e1580f37f58f7b9d767478MD56TESIS AILAN FARID ARENAS.pdf.jpgTESIS AILAN FARID ARENAS.pdf.jpgGenerated Thumbnailimage/jpeg6321https://bdigital.uniquindio.edu.co/bitstreams/586385fd-2b71-44d2-9f6f-e18aeaa98ee0/download371dd9547614effe85db15fb074a01b8MD57TEXTLicencia Ailan Farid.pdf.txtLicencia Ailan Farid.pdf.txtExtracted texttext/plain4https://bdigital.uniquindio.edu.co/bitstreams/a56a2442-4acf-4bd7-bca8-a46db7cb8f6e/downloadff4c8ff01d544500ea4bfea43e6108c1MD54TESIS AILAN FARID ARENAS.pdf.txtTESIS AILAN FARID ARENAS.pdf.txtExtracted texttext/plain155875https://bdigital.uniquindio.edu.co/bitstreams/aeebcfeb-f90b-46d1-81ba-32d2483740e7/download7e10406bbd3e616d6c76e1b7b6b23766MD55LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bdigital.uniquindio.edu.co/bitstreams/e7c96715-e221-416f-989a-9bbb5deabb10/download8a4605be74aa9ea9d79846c1fba20a33MD53ORIGINALLicencia Ailan Farid.pdfLicencia Ailan Farid.pdfapplication/pdf1951569https://bdigital.uniquindio.edu.co/bitstreams/f6107548-18fc-4ff5-9437-b088d28c9879/downloadd74ba25eb21ff4613339656ff1f13e72MD51TESIS AILAN FARID ARENAS.pdfTESIS AILAN FARID ARENAS.pdfapplication/pdf2672729https://bdigital.uniquindio.edu.co/bitstreams/756f99e2-f84c-4ada-af8d-282aa6966df4/downloaddc9fb42ae901a13e9ffd855d6ba4f916MD52001/4191oai:bdigital.uniquindio.edu.co:001/41912024-06-07 11:19:51.319https://creativecommons.org/licenses/by/4.0/Derechos Reservados - Universidad del Quindíorestrictedhttps://bdigital.uniquindio.edu.coBiblioteca Digital Universidad del Quindíobdigital@metabiblioteca.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