Principales herramientas moleculares empleadas en la ciencia animal

Autores:
ARANGUREN, YANI
MACHADO, ELWI
MONTES V., DONICER
Tipo de recurso:
Article of journal
Fecha de publicación:
2013
Institución:
Universidad de Sucre
Repositorio:
Repositorio Unisucre
Idioma:
spa
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oai:repositorio.unisucre.edu.co:001/1452
Acceso en línea:
https://repositorio.unisucre.edu.co/handle/001/1452
https://doi.org/10.24188/recia.v5.n2.2013.459
Palabra clave:
diagnostics
DNA
Genetic Variation
PCR.
diagnostico
DNA
PCR
variación genética.
Rights
openAccess
License
https://creativecommons.org/licenses/by-nc-sa/4.0/
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network_acronym_str RUNISUCRE2
network_name_str Repositorio Unisucre
repository_id_str
dc.title.spa.fl_str_mv Principales herramientas moleculares empleadas en la ciencia animal
dc.title.translated.eng.fl_str_mv Main molecular tools employed in animal science
title Principales herramientas moleculares empleadas en la ciencia animal
spellingShingle Principales herramientas moleculares empleadas en la ciencia animal
diagnostics
DNA
Genetic Variation
PCR.
diagnostico
DNA
PCR
variación genética.
title_short Principales herramientas moleculares empleadas en la ciencia animal
title_full Principales herramientas moleculares empleadas en la ciencia animal
title_fullStr Principales herramientas moleculares empleadas en la ciencia animal
title_full_unstemmed Principales herramientas moleculares empleadas en la ciencia animal
title_sort Principales herramientas moleculares empleadas en la ciencia animal
dc.creator.fl_str_mv ARANGUREN, YANI
MACHADO, ELWI
MONTES V., DONICER
dc.contributor.author.spa.fl_str_mv ARANGUREN, YANI
MACHADO, ELWI
MONTES V., DONICER
dc.subject.eng.fl_str_mv diagnostics
DNA
Genetic Variation
PCR.
topic diagnostics
DNA
Genetic Variation
PCR.
diagnostico
DNA
PCR
variación genética.
dc.subject.spa.fl_str_mv diagnostico
DNA
PCR
variación genética.
publishDate 2013
dc.date.accessioned.none.fl_str_mv 2013-07-12 00:00:00
2022-07-01T17:15:36Z
dc.date.available.none.fl_str_mv 2013-07-12 00:00:00
2022-07-01T17:15:36Z
dc.date.issued.none.fl_str_mv 2013-07-12
dc.type.spa.fl_str_mv Artículo de revista
dc.type.eng.fl_str_mv Journal article
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dc.identifier.doi.none.fl_str_mv 10.24188/recia.v5.n2.2013.459
dc.identifier.eissn.none.fl_str_mv 2027-4297
dc.identifier.url.none.fl_str_mv https://doi.org/10.24188/recia.v5.n2.2013.459
url https://repositorio.unisucre.edu.co/handle/001/1452
https://doi.org/10.24188/recia.v5.n2.2013.459
identifier_str_mv 10.24188/recia.v5.n2.2013.459
2027-4297
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.references.spa.fl_str_mv ANTONANGELO, A.; COLOMBI, D.; CURI, R.; BRAZ, A.; OLIVEIRA, T. y MOTAL, M. 2012. Detection and quantification of Duffy antigen on bovine red blood cell membranes using a polyclonal antibody. Pesq. Vet. Bras. 32(9): 936–940.
APARICIO, S.; CHAPMAN, J.; STUPKA, E.; PUTNAM, N.; CHIA, J.; DEHAL, P.; CHRISTOFFELS, A. et al . Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297(5585): 1301–1310.
AZOFEIFA, A. 2006. Uso de marcadores moleculares en plantas; aplicaciones en frutales del trópico. Agronomía Mesoamericana, 17: 221-242.
BAUER, O. 1976. Fitogenética aplicada. Editorial Limusa. México D.F. BENSON, D.; KARSCH-MIZRACHI, I.; LIPMAN, D.; OSTELL, J. y WHEELER, D. 2005. GenBank. Nucleic acids research 33: D34–D38.
BOTSTEIN, D.; WHITE, R.; SKOLNICK, M. y DAVIS, R. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. The American Journal of Human Genetics 32: 314-331.
BOVINE GENOME SEQUENCING AND ANALYSIS CONSORTIUM. 2009. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science 324(5926):522-528.
BOVINE HAPMAP CONSORTIUM. 2009. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science 324(5926):528-532.
BREYNE, P.; DREESEN, R.; CANNOOT, B.; ROMBAUT, D.; VANDEPOELE, K.; ROMBAUTS, S.; VANDERHAEGHEN, R.; INZÉ, D. y ZABEAU, M. 2003. Quantitative cDNA-AFLP analysis for genome-wide expression studies. Molecular genetics and genomics 269: 173-179.
CARLEER, J.; PASTORET, P. y ANSAY, M. 1978. Isozyme characterization of cattle (Bos taurus) and American buffalo (Bison bison) cell cultures. Animal Blood Groups Biochemical Genetics 9(3):175-179.
DA SILVA, J.; ANDRÉ, M.; DA FONSECA, A.; LOPES, C.; DA SILVA, D.; DE ANDRADE, S.; OLIVEIRA, C. y BARBOSA, J. 2013. Molecular and serological prevalence of Babesia bovis and Babesia bigemina in water buffaloes in the north region of Brazil. Veterinary parasitology 197(3-4): 678-681. DEKKERS, J.C.M. 2004. Commercial application of marker and gene assisted selection in livestock: Strategies and lessons. Journal of Animal Science, v.82, p.313-328
DALE, J. y VON SCHANTZ, M. 2002. From Genes to Genomes: Concepts and Applications of DNA Technology. Editorial John Wiley y Sons, Ltd. Londres. DJARI, A.; ESQUERRÉ, D., WEISS, B., MARTINS, F., MEERSSEMAN, C., BOUSSAHA, M., KLOPP, C. y ROCHA D. 2013.Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing. BMC Genomics 14:307.
DI BELLA, J.; BAO, Y.; GLOOR, G.; BURTON, J. y REID, G. 2013. High throughput sequencing methods and analysis for microbiome research. Journal of microbiological methods 5(3): 401-414.
DUAN, Z.; GUO, Y. y LIU, J. 2006. Application of modern molecular biology techniques to study micro-ecosystem in the rumen. Wei Sheng Wu Xue Bao 46: 166-169.
FERREIRA, E.; DE LANA, M.; CARNEIRO, M.; REIS, A.; PAES, D.; DA SILVA, E.; SCHALLIG, H. y GONTIJO, C. 2007. Comparison of serological assays for the diagnosis of canine visceral leishmaniasis in animals presenting different clinical manifestations. Veterinary parasitology 146(3-4): 235-241.
FRANK, D. y PACE, N. 2008. Gastrointestinal microbiology enters the metagenomics era. Current opinion in gastroenterology 24(1): 4-10.
FRANKHAM, R.; BALLOU, J. y BRISCOE, D. 2004. Introduction to conservation genetics. Editorial Cambridge University Press, Cambridge. GEORGES, M. 2012. Impact of high-throughput genotyping and sequencing on the identification of genes and variants underlying phenotypic variation in domestic cattle. En: Womack, J. (eds). Bovine Genomic. Editorial John Wiley y Sons, Ltd, Oxford.
HEBERT, P.; CYWINSKA, A.; BALL, S. y DE WAARD, J. 2003. Biological identifications through DNA barcodes. Proceedings of the Royal Society B 270: 313-321.
HILLIER, W.; MILLER, W.; BIRNEY, E.; WARREN, W.; HARDISON, R.; PONTING C.; et al . 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432(7018): 695-716.
HOBSON, P. y STEWART, C. (eds). 1997. The Rumen Microbial Ecosystem (2da edicion). Editorial Springer Netherlands, Dordrecht, Holanda.
HUNGATE, R. 1966. The rumen and its microbes. Editorial Academic Press, New York.
HYTEN, D.; SONG, Q.; FICKUS, E.; QUIGLEY, C.; LIM, J.; CHOI, I.; HWANG, E.; PASTOR-CORRALES, M. y CREGAN, P. 2010. High-throughput SNP discovery and assay development in common bean. BMC genomics 11: 475-483.
INTERNATIONAL CHICKEN GENOME SEQUENCING CONSORTIUM. 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432: 695-716.
KIM, M.; MORRISON, M. y YU, Z. 2011. Status of the phylogenetic diversity census of ruminal microbiomes. FEMS microbiology ecology 76(1): 49-63.
LIPMAN,D. National Center for Biotechnology information. [serial online] 2013 [Citado 30 Dic 2013]. Disponible en: http://www.ncbi.nlm.nih.gov/snp/?term=Bos taurus.
LITT, M. y LUTY, J. 1989. A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. The American Journal of Human Genetics 44:397-401.
LUQUE, J. y HERRÁEZ, A. 2001. Texto ilustrado de biología molecular e ingeniería genética: conceptos, técnicas y aplicaciones en ciencias de la salud. Editorial Elsevier. Madrid.
MASKOS, U. y SOUTHERN, E. 1992. Oligonucleotide hybridisations on glass supports: a novel linker for oligonucleotide synthesis and hybridisation properties of oligonucleotides synthesised in situ. Nucleic Acids Research 20(7): 1679-1684.
MATSUZAKI, H.; LOI, H.; DONG, S.; TSAI, Y.; FANG, J.; LAW, J.; DI, X.; et al., 2004. Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array. Genome research 14(3): 414-25.
MATUKUMALLI, L.; LAWLEY, C.; SCHNABEL, R.; TAYLOR, J.; ALLAN, M.; HEATON, M.; O’CONNELL, J.; MOORE, S.; SMITH, T.; SONSTEGARD, T. y VAN TASSELL, C. 2009. Development and characterization of a high density SNP genotyping assay for cattle. PloS one 4(4): e5350
Mac SWEENEY, C. y MACKIE, R. 2012. Micro-organisms and ruminant digestion: state of knowledge, trands and future prospects. Commission On Genetic Resources for Food and Agriculture (Editores), Roma: disponible en: http://www.fao.org/docrep/016/ap099e/ap099e.pdf.
METZKER, M. 2010. Sequencing technologies - the next generation. Nature reviews. Genetics 11(1): 31-46.
MONIS, P.; GIGLIO, S.; KEEGAN, A. y THOMPSON, R. 2005. Emerging technologies for the detection and genetic characterization of protozoan parasites. Trends Parasitol. 21:340-346.
MULLIS, K.; FALOONA, F.; SCHARF, S.; SAIKI, R.; HORN, G. y ERLICH, H. 1986. Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. Old Spring Harbor Symposia on Quantitative Biology 51(1):263-73.
NELSON, M,; MARNELLOS, G.; KAMMERER, S.; HOYAL, C.; SHI, M.; CANTOR, C. y BRAUN, A. 2004. Large-Scale Validation of Single Nucleotide Polymorphisms in Gene Regions. Genome Research 14(8): 1664-1668.
OSOEGAWA, K.; WOON, P.; ZHAO, B.; FRENGEN, E.; TATENO, M.; CATANESE, J. y DE JONG, P. 1998. An improved approach for construction of bacterial artificial chromosome libraries. Genomics 52(1): 1-8.
PAREEK, C.; SMOCZYNSKI, R. y TRETYN, A. 2011. Sequencing technologies and genome sequencing. Journal of applied genetics 52(4): 413-435.
POLIDO, P.; FERREIRA, F.; ALBERTON, O. y HÜLSE, S. 2012. Marcadores moleculares aplicados no melhoramento genético de bovinos. Arquivos de Ciências Veterinárias e Zoologia da UNIPAR 15(2): 161-169.
SAIKI, R.; GELFAND, D.; STOFFEL, S.; SCHARF, S.; HIGUCHI, R.; HORN, G.; MULLIS, K. y ERLICH, H. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239(4839): 487-491.
SAMBROOK, J., RUSSELL, D. 2001. Molecular Cloning: A Laboratory Manual. (3ra edición) Editorial Cold Spring Harbor Laboratory Press, Nueva York.
SANGER, F.; AIR, G.; BARRELL, B.; BROWN, N.; COULSON, A.; FIDDES, J.; HUTCHISON, C.; SLOCOMBE, P. y SMITH, M. 1977. Nucleotide sequence of bacteriophage ?X174 DNA. Nature 265(5596): 687-695.
SCHOOK, L.; BEEVER, J.; ROGERS, J.; HUMPHRAY, S.; ARCHIBALD, A.; CHARDON, P.; MILAN, D.; ROHRER, G. y EVERSOLE, K. 2005. Swine Genome Sequencing Consortium (SGSC): a strategic roadmap for sequencing the pig genome. Comparative and Functinal Genomics (4): 251-255.
TAUTZ, D. 1989. Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Research 17:6463-6471. THORNTON, P. 2010. Livestock production: recent trends,future prospects. Philosophical Transactions B 365: 2853-2867. VENTER, J.; ADAMS, D.; MYERS, E.; et al., 2001. The sequence of the human genome. Science 291(5507): 1304-1351. WILLIAMS.; J.; KUBEILIK.; A.; LIVAK.; K.; RAFALSKI.; J. y TINGEY.; S. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18:6531-6535.
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spelling ARANGUREN, YANI6c98db485db7f6d3897a920f46a56dec500MACHADO, ELWIbab8651626ec6c0f936b3ca5fb5d84b8500MONTES V., DONICERa66edd7487d2e315d53ce65369f99aed2013-07-12 00:00:002022-07-01T17:15:36Z2013-07-12 00:00:002022-07-01T17:15:36Z2013-07-12https://repositorio.unisucre.edu.co/handle/001/145210.24188/recia.v5.n2.2013.4592027-4297https://doi.org/10.24188/recia.v5.n2.2013.459application/pdfspaUniversidad de Sucrehttps://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2https://revistas.unisucre.edu.co/index.php/recia/article/view/459diagnosticsDNAGenetic VariationPCR.diagnosticoDNAPCRvariación genética.Principales herramientas moleculares empleadas en la ciencia animalMain molecular tools employed in animal scienceArtículo de revistaJournal articleinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_dcae04bchttp://purl.org/coar/resource_type/c_2df8fbb1Texthttp://purl.org/redcol/resource_type/ARTREVhttp://purl.org/coar/version/c_970fb48d4fbd8a85ANTONANGELO, A.; COLOMBI, D.; CURI, R.; BRAZ, A.; OLIVEIRA, T. y MOTAL, M. 2012. Detection and quantification of Duffy antigen on bovine red blood cell membranes using a polyclonal antibody. Pesq. Vet. Bras. 32(9): 936–940.APARICIO, S.; CHAPMAN, J.; STUPKA, E.; PUTNAM, N.; CHIA, J.; DEHAL, P.; CHRISTOFFELS, A. et al . Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297(5585): 1301–1310.AZOFEIFA, A. 2006. Uso de marcadores moleculares en plantas; aplicaciones en frutales del trópico. Agronomía Mesoamericana, 17: 221-242.BAUER, O. 1976. Fitogenética aplicada. Editorial Limusa. México D.F. BENSON, D.; KARSCH-MIZRACHI, I.; LIPMAN, D.; OSTELL, J. y WHEELER, D. 2005. GenBank. Nucleic acids research 33: D34–D38.BOTSTEIN, D.; WHITE, R.; SKOLNICK, M. y DAVIS, R. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. The American Journal of Human Genetics 32: 314-331.BOVINE GENOME SEQUENCING AND ANALYSIS CONSORTIUM. 2009. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science 324(5926):522-528.BOVINE HAPMAP CONSORTIUM. 2009. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science 324(5926):528-532.BREYNE, P.; DREESEN, R.; CANNOOT, B.; ROMBAUT, D.; VANDEPOELE, K.; ROMBAUTS, S.; VANDERHAEGHEN, R.; INZÉ, D. y ZABEAU, M. 2003. Quantitative cDNA-AFLP analysis for genome-wide expression studies. Molecular genetics and genomics 269: 173-179.CARLEER, J.; PASTORET, P. y ANSAY, M. 1978. Isozyme characterization of cattle (Bos taurus) and American buffalo (Bison bison) cell cultures. Animal Blood Groups Biochemical Genetics 9(3):175-179.DA SILVA, J.; ANDRÉ, M.; DA FONSECA, A.; LOPES, C.; DA SILVA, D.; DE ANDRADE, S.; OLIVEIRA, C. y BARBOSA, J. 2013. Molecular and serological prevalence of Babesia bovis and Babesia bigemina in water buffaloes in the north region of Brazil. Veterinary parasitology 197(3-4): 678-681. DEKKERS, J.C.M. 2004. Commercial application of marker and gene assisted selection in livestock: Strategies and lessons. Journal of Animal Science, v.82, p.313-328DALE, J. y VON SCHANTZ, M. 2002. From Genes to Genomes: Concepts and Applications of DNA Technology. Editorial John Wiley y Sons, Ltd. Londres. DJARI, A.; ESQUERRÉ, D., WEISS, B., MARTINS, F., MEERSSEMAN, C., BOUSSAHA, M., KLOPP, C. y ROCHA D. 2013.Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing. BMC Genomics 14:307.DI BELLA, J.; BAO, Y.; GLOOR, G.; BURTON, J. y REID, G. 2013. High throughput sequencing methods and analysis for microbiome research. Journal of microbiological methods 5(3): 401-414.DUAN, Z.; GUO, Y. y LIU, J. 2006. Application of modern molecular biology techniques to study micro-ecosystem in the rumen. Wei Sheng Wu Xue Bao 46: 166-169.FERREIRA, E.; DE LANA, M.; CARNEIRO, M.; REIS, A.; PAES, D.; DA SILVA, E.; SCHALLIG, H. y GONTIJO, C. 2007. Comparison of serological assays for the diagnosis of canine visceral leishmaniasis in animals presenting different clinical manifestations. Veterinary parasitology 146(3-4): 235-241.FRANK, D. y PACE, N. 2008. Gastrointestinal microbiology enters the metagenomics era. Current opinion in gastroenterology 24(1): 4-10.FRANKHAM, R.; BALLOU, J. y BRISCOE, D. 2004. Introduction to conservation genetics. Editorial Cambridge University Press, Cambridge. GEORGES, M. 2012. Impact of high-throughput genotyping and sequencing on the identification of genes and variants underlying phenotypic variation in domestic cattle. En: Womack, J. (eds). Bovine Genomic. Editorial John Wiley y Sons, Ltd, Oxford.HEBERT, P.; CYWINSKA, A.; BALL, S. y DE WAARD, J. 2003. Biological identifications through DNA barcodes. Proceedings of the Royal Society B 270: 313-321.HILLIER, W.; MILLER, W.; BIRNEY, E.; WARREN, W.; HARDISON, R.; PONTING C.; et al . 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432(7018): 695-716.HOBSON, P. y STEWART, C. (eds). 1997. The Rumen Microbial Ecosystem (2da edicion). Editorial Springer Netherlands, Dordrecht, Holanda.HUNGATE, R. 1966. The rumen and its microbes. Editorial Academic Press, New York.HYTEN, D.; SONG, Q.; FICKUS, E.; QUIGLEY, C.; LIM, J.; CHOI, I.; HWANG, E.; PASTOR-CORRALES, M. y CREGAN, P. 2010. High-throughput SNP discovery and assay development in common bean. BMC genomics 11: 475-483.INTERNATIONAL CHICKEN GENOME SEQUENCING CONSORTIUM. 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432: 695-716.KIM, M.; MORRISON, M. y YU, Z. 2011. Status of the phylogenetic diversity census of ruminal microbiomes. FEMS microbiology ecology 76(1): 49-63.LIPMAN,D. National Center for Biotechnology information. [serial online] 2013 [Citado 30 Dic 2013]. Disponible en: http://www.ncbi.nlm.nih.gov/snp/?term=Bos taurus.LITT, M. y LUTY, J. 1989. A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. The American Journal of Human Genetics 44:397-401.LUQUE, J. y HERRÁEZ, A. 2001. Texto ilustrado de biología molecular e ingeniería genética: conceptos, técnicas y aplicaciones en ciencias de la salud. Editorial Elsevier. Madrid.MASKOS, U. y SOUTHERN, E. 1992. Oligonucleotide hybridisations on glass supports: a novel linker for oligonucleotide synthesis and hybridisation properties of oligonucleotides synthesised in situ. Nucleic Acids Research 20(7): 1679-1684.MATSUZAKI, H.; LOI, H.; DONG, S.; TSAI, Y.; FANG, J.; LAW, J.; DI, X.; et al., 2004. Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array. Genome research 14(3): 414-25.MATUKUMALLI, L.; LAWLEY, C.; SCHNABEL, R.; TAYLOR, J.; ALLAN, M.; HEATON, M.; O’CONNELL, J.; MOORE, S.; SMITH, T.; SONSTEGARD, T. y VAN TASSELL, C. 2009. Development and characterization of a high density SNP genotyping assay for cattle. PloS one 4(4): e5350Mac SWEENEY, C. y MACKIE, R. 2012. Micro-organisms and ruminant digestion: state of knowledge, trands and future prospects. Commission On Genetic Resources for Food and Agriculture (Editores), Roma: disponible en: http://www.fao.org/docrep/016/ap099e/ap099e.pdf.METZKER, M. 2010. Sequencing technologies - the next generation. Nature reviews. Genetics 11(1): 31-46.MONIS, P.; GIGLIO, S.; KEEGAN, A. y THOMPSON, R. 2005. Emerging technologies for the detection and genetic characterization of protozoan parasites. Trends Parasitol. 21:340-346.MULLIS, K.; FALOONA, F.; SCHARF, S.; SAIKI, R.; HORN, G. y ERLICH, H. 1986. Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. 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