Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)

Genetic variability studies on species with a pharmacological potential are essential for conserving genetic resources. A genetic characterization of a species can guide efforts to collect and conserve germplasm for future breeding programs. The Croton genus belongs to the Euphorbiaceae family, whic...

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Tipo de recurso:: http://purl.org/coar/resource_type/c_7109

Fecha de publicación:: 2022

Institución:: Universidad Pedagógica y Tecnológica de Colombia

Repositorio:: RiUPTC: Repositorio Institucional UPTC

Idioma:: eng

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dc.title.en-US.fl_str_mv	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
dc.title.es-ES.fl_str_mv	Estudio de la diversidad genética de Croton sp. en el departamento de Norte de Santander utilizando la región espaciadora transcrita interna (ITS) del ADN ribosómico (rDNA)
title	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
spellingShingle	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA) Euphorbiaceae Medicinal plants Drago's blood Neotropics Genetic variability Molecular systematics Medicinal plant Euphorbiacea Plantas medicinales Sangre de Drago Neotrópico Variabilidad genética Sistemática molecular Planta medicinal
title_short	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
title_full	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
title_fullStr	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
title_full_unstemmed	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
title_sort	Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)
dc.subject.en-US.fl_str_mv	Euphorbiaceae Medicinal plants Drago's blood Neotropics Genetic variability Molecular systematics Medicinal plant
topic	Euphorbiaceae Medicinal plants Drago's blood Neotropics Genetic variability Molecular systematics Medicinal plant Euphorbiacea Plantas medicinales Sangre de Drago Neotrópico Variabilidad genética Sistemática molecular Planta medicinal
dc.subject.es-ES.fl_str_mv	Euphorbiacea Plantas medicinales Sangre de Drago Neotrópico Variabilidad genética Sistemática molecular Planta medicinal
description	Genetic variability studies on species with a pharmacological potential are essential for conserving genetic resources. A genetic characterization of a species can guide efforts to collect and conserve germplasm for future breeding programs. The Croton genus belongs to the Euphorbiaceae family, which has approximately 1,300 species, is widely distributed in tropical and subtropical regions of the world, and has a wide range of ethnobotanical and medicinal uses. The aim of this research was to study genetic variability by analyzing sequences of the internal transcribed space region (ITS1 5'-TCCGTAGGGAACCTGCGGC-3' and ITS4 5'-TCCTCCGCTTATGC-3') of ribosomal DNA (rDNA) of a Croton population from forested areas in the Department of Norte de Santander in the municipalities of Chinacota, Pamplona and El Zulia. The results indicated considerable genetic variability in the Croton population, with a nucleotide similarity ranging from 54 to 99% and phylogenetical grouping according to the place of origin. The information gained from the ITS region can be a useful parameter for diversity evaluations and phylogenetic studies since there are no similar studies on Croton in this department in northeastern Colombia.
publishDate	2022
dc.date.accessioned.none.fl_str_mv	2024-07-08T14:42:54Z
dc.date.available.none.fl_str_mv	2024-07-08T14:42:54Z
dc.date.none.fl_str_mv	2022-01-01
dc.type.en-US.fl_str_mv	Text
dc.type.es-ES.fl_str_mv	Texto
dc.type.none.fl_str_mv	info:eu-repo/semantics/article
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dc.identifier.none.fl_str_mv	https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/13592 10.17584/rcch.2022v16i1.13592
dc.identifier.uri.none.fl_str_mv	https://repositorio.uptc.edu.co/handle/001/16999
url	https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/13592 https://repositorio.uptc.edu.co/handle/001/16999
identifier_str_mv	10.17584/rcch.2022v16i1.13592
dc.language.none.fl_str_mv	eng
dc.language.iso.spa.fl_str_mv	eng
language	eng
dc.relation.none.fl_str_mv	https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/13592/11590
dc.rights.en-US.fl_str_mv	Copyright (c) 2022 Revista Colombiana de Ciencias Hortícolas http://creativecommons.org/licenses/by-nc-sa/4.0
dc.rights.coar.fl_str_mv	http://purl.org/coar/access_right/c_abf2
dc.rights.uri.spa.fl_str_mv	https://creativecommons.org/licenses/by-nc/4.0/
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rights_invalid_str_mv	Copyright (c) 2022 Revista Colombiana de Ciencias Hortícolas http://creativecommons.org/licenses/by-nc-sa/4.0 https://creativecommons.org/licenses/by-nc/4.0/ http://purl.org/coar/access_right/c_abf610 http://purl.org/coar/access_right/c_abf2
dc.format.none.fl_str_mv	application/pdf
dc.coverage.en-US.fl_str_mv	Colombia; Norte de Santander
dc.coverage.es-ES.fl_str_mv	Colombia; Norte de Santander
dc.publisher.en-US.fl_str_mv	Sociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTC
dc.source.en-US.fl_str_mv	Revista Colombiana de Ciencias Hortícolas; Vol. 16 No. 1 (2022); e13592
dc.source.es-ES.fl_str_mv	Revista Colombiana de Ciencias Hortícolas; Vol. 16 Núm. 1 (2022); e13592
dc.source.fr-FR.fl_str_mv	Revista Colombiana de Ciencias Hortícolas; Vol. 16 No 1 (2022); e13592
dc.source.it-IT.fl_str_mv	Revista Colombiana de Ciencias Hortícolas; V. 16 N. 1 (2022); e13592
dc.source.pt-BR.fl_str_mv	Revista Colombiana de Ciencias Hortícolas; v. 16 n. 1 (2022); e13592
dc.source.none.fl_str_mv	2422-3719 2011-2173
institution	Universidad Pedagógica y Tecnológica de Colombia
repository.name.fl_str_mv	Repositorio Institucional UPTC
repository.mail.fl_str_mv	repositorio.uptc@uptc.edu.co
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spelling	2022-01-012024-07-08T14:42:54Z2024-07-08T14:42:54Zhttps://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/1359210.17584/rcch.2022v16i1.13592https://repositorio.uptc.edu.co/handle/001/16999Genetic variability studies on species with a pharmacological potential are essential for conserving genetic resources. A genetic characterization of a species can guide efforts to collect and conserve germplasm for future breeding programs. The Croton genus belongs to the Euphorbiaceae family, which has approximately 1,300 species, is widely distributed in tropical and subtropical regions of the world, and has a wide range of ethnobotanical and medicinal uses. The aim of this research was to study genetic variability by analyzing sequences of the internal transcribed space region (ITS1 5'-TCCGTAGGGAACCTGCGGC-3' and ITS4 5'-TCCTCCGCTTATGC-3') of ribosomal DNA (rDNA) of a Croton population from forested areas in the Department of Norte de Santander in the municipalities of Chinacota, Pamplona and El Zulia. The results indicated considerable genetic variability in the Croton population, with a nucleotide similarity ranging from 54 to 99% and phylogenetical grouping according to the place of origin. The information gained from the ITS region can be a useful parameter for diversity evaluations and phylogenetic studies since there are no similar studies on Croton in this department in northeastern Colombia.Los estudios de variabilidad genética de especies con potencial farmacológico son esenciales para la conservación de los recursos genéticos. La caracterización genética de una especie puede guiar los esfuerzos para recolectar y conservar germoplasma para futuros programas de mejoramiento. El género Croton pertenece a la familia Euphorbiaceae, que comprende aproximadamente 1.300 especies, ampliamente distribuidas en regiones tropicales y subtropicales del mundo y se caracteriza por una amplia gama de usos a nivel etnobotánico y medicinal. El objetivo de esta investigación fue estudiar la variabilidad genética a través del análisis de secuencias de la región espaciadora transcrita interna (ITS, del inglés internal transcribed spacer) (ITS1 5'-TCCGTAGGGAACCTGCGGC-3' e ITS4 5'-TCCTCCGCTTATGC-3') del ADN ribosomal (rDNA) de una población de Croton presente en áreas boscosas del departamento de Norte de Santander en los municipios de Chinacota, Pamplona y El Zulia. Los resultados indican que existe una considerable variabilidad genética entre los individuos de la población de Croton con una similitud de nucleótidos que oscila entre el 54 y el 99%, agrupándose filogenéticamente según el lugar de origen. La información generada en este trabajo desde la región ITS es un parámetro útil para la evaluación de la diversidad y los estudios filogenéticos ya que no existen estudios de esta naturaleza en Croton en este departamento del noreste de Colombia.application/pdfengengSociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTChttps://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/13592/11590Copyright (c) 2022 Revista Colombiana de Ciencias Hortícolashttp://creativecommons.org/licenses/by-nc-sa/4.0https://creativecommons.org/licenses/by-nc/4.0/http://purl.org/coar/access_right/c_abf610http://purl.org/coar/access_right/c_abf2Revista Colombiana de Ciencias Hortícolas; Vol. 16 No. 1 (2022); e13592Revista Colombiana de Ciencias Hortícolas; Vol. 16 Núm. 1 (2022); e13592Revista Colombiana de Ciencias Hortícolas; Vol. 16 No 1 (2022); e13592Revista Colombiana de Ciencias Hortícolas; V. 16 N. 1 (2022); e13592Revista Colombiana de Ciencias Hortícolas; v. 16 n. 1 (2022); e135922422-37192011-2173EuphorbiaceaeMedicinal plantsDrago's bloodNeotropicsGenetic variabilityMolecular systematicsMedicinal plantEuphorbiaceaPlantas medicinalesSangre de DragoNeotrópicoVariabilidad genéticaSistemática molecularPlanta medicinalStudy on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)Estudio de la diversidad genética de Croton sp. en el departamento de Norte de Santander utilizando la región espaciadora transcrita interna (ITS) del ADN ribosómico (rDNA)TextTextoinfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_7109http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/publishedVersionhttp://purl.org/coar/version/c_970fb48d4fbd8a693http://purl.org/coar/version/c_970fb48d4fbd8a85Colombia; Norte de SantanderColombia; Norte de SantanderChaves-Bedoya, Giovanni001/16999oai:repositorio.uptc.edu.co:001/169992025-07-18 11:49:43.949https://creativecommons.org/licenses/by-nc/4.0/metadata.onlyhttps://repositorio.uptc.edu.coRepositorio Institucional UPTCrepositorio.uptc@uptc.edu.co

Study on Croton sp. genetic diversity in the Department of Norte de Santander using the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA)

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