BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)

One of the major challenges that breeders face is the differential response of genotypes from one environment to another, known as the genotype × environmental interaction (GxE). The optimal procedure with the restricted maximum likelihood/best linear unbiased predictor (REML/BLUP) allows simultaneo...

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Tipo de recurso:
http://purl.org/coar/resource_type/c_6620
Fecha de publicación:
2020
Institución:
Universidad Pedagógica y Tecnológica de Colombia
Repositorio:
RiUPTC: Repositorio Institucional UPTC
Idioma:
eng
OAI Identifier:
oai:repositorio.uptc.edu.co:001/16851
Acceso en línea:
https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/8138
https://repositorio.uptc.edu.co/handle/001/16851
Palabra clave:
Potato breeding
Selection index
ESIM
Genetic parameters
Potato
Mejoramiento de papa
Índice de selección
ESIM
Parámetros genéticos
Papa
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License
Copyright (c) 2020 Revista Colombiana de Ciencias Hortícolas
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dc.title.en-US.fl_str_mv BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
dc.title.es-ES.fl_str_mv Análisis BLUP (Best Linear Unbiased Predictors) en etapas avanzadas de selección en papa criolla (Solanum tuberosum Grupo Phureja)
title BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
spellingShingle BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
Potato breeding
Selection index
ESIM
Genetic parameters
Potato
Mejoramiento de papa
Índice de selección
ESIM
Parámetros genéticos
Papa
title_short BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
title_full BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
title_fullStr BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
title_full_unstemmed BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
title_sort BLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)
dc.subject.en-US.fl_str_mv Potato breeding
Selection index
ESIM
Genetic parameters
Potato
topic Potato breeding
Selection index
ESIM
Genetic parameters
Potato
Mejoramiento de papa
Índice de selección
ESIM
Parámetros genéticos
Papa
dc.subject.es-ES.fl_str_mv Mejoramiento de papa
Índice de selección
ESIM
Parámetros genéticos
Papa
description One of the major challenges that breeders face is the differential response of genotypes from one environment to another, known as the genotype × environmental interaction (GxE). The optimal procedure with the restricted maximum likelihood/best linear unbiased predictor (REML/BLUP) allows simultaneous estimation of genetic parameters and prediction of genotypic values. BLUP predictors are an alternative to the narrowing of biased values, which are based on variances of genotype to determine the response value, as a complement to the selection index (SI). The ESIM (Eigenvalue Selection Index) selects genotypes based on two or more variables or selection characters as long as the economic matrix possesses the appropriate values for highlighting the desired response variable. Three stages of selection were evaluated in an advanced diploid potato improvement program. BLUP values were obtained for the yield and specific gravity variables, used to determine the genetic parameters and the SI. The genetic gain for yield corresponded to 1.228 kg/plant with a heritability (H2) = 0.82, while the GA for GE was 0.02 with an H2 = 0.935. The SI from the BLUP values selected in the final stages of the three new cultivars (Criolla Dorada, Criolla Ocarina and Criolla Sua Pa) was registered at the Instituto Colombiano Agropecuario (ICA). Although BLUE and BLUP are highly correlated, the BLUP/ESIM analysis has an advantage as a predictor because it reduces responses to the environmental effect, efficiently selecting genotypes with a high agronomic potential.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2024-07-08T14:42:35Z
dc.date.available.none.fl_str_mv 2024-07-08T14:42:35Z
dc.date.none.fl_str_mv 2020-06-12
dc.type.en-US.fl_str_mv Text
dc.type.es-ES.fl_str_mv Texto
dc.type.none.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.none.fl_str_mv https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/8138
10.17584/rcch.2020v14i1.8138
dc.identifier.uri.none.fl_str_mv https://repositorio.uptc.edu.co/handle/001/16851
url https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/8138
https://repositorio.uptc.edu.co/handle/001/16851
identifier_str_mv 10.17584/rcch.2020v14i1.8138
dc.language.none.fl_str_mv eng
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/8138/9376
dc.rights.en-US.fl_str_mv Copyright (c) 2020 Revista Colombiana de Ciencias Hortícolas
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0/
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf121
rights_invalid_str_mv Copyright (c) 2020 Revista Colombiana de Ciencias Hortícolas
https://creativecommons.org/licenses/by-nc/4.0/
http://purl.org/coar/access_right/c_abf121
http://purl.org/coar/access_right/c_abf2
dc.format.none.fl_str_mv application/pdf
dc.coverage.en-US.fl_str_mv Colombia; Cundinamarca
dc.coverage.es-ES.fl_str_mv Colombia; Cundinamarca
dc.publisher.en-US.fl_str_mv Sociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTC
dc.source.en-US.fl_str_mv Revista Colombiana de Ciencias Hortícolas; Vol. 14 No. 1 (2020); 125-134
dc.source.es-ES.fl_str_mv Revista Colombiana de Ciencias Hortícolas; Vol. 14 Núm. 1 (2020); 125-134
dc.source.fr-FR.fl_str_mv Revista Colombiana de Ciencias Hortícolas; Vol. 14 No 1 (2020); 125-134
dc.source.it-IT.fl_str_mv Revista Colombiana de Ciencias Hortícolas; V. 14 N. 1 (2020); 125-134
dc.source.pt-BR.fl_str_mv Revista Colombiana de Ciencias Hortícolas; v. 14 n. 1 (2020); 125-134
dc.source.none.fl_str_mv 2422-3719
2011-2173
institution Universidad Pedagógica y Tecnológica de Colombia
repository.name.fl_str_mv Repositorio Institucional UPTC
repository.mail.fl_str_mv repositorio.uptc@uptc.edu.co
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spelling 2020-06-122024-07-08T14:42:35Z2024-07-08T14:42:35Zhttps://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/813810.17584/rcch.2020v14i1.8138https://repositorio.uptc.edu.co/handle/001/16851One of the major challenges that breeders face is the differential response of genotypes from one environment to another, known as the genotype × environmental interaction (GxE). The optimal procedure with the restricted maximum likelihood/best linear unbiased predictor (REML/BLUP) allows simultaneous estimation of genetic parameters and prediction of genotypic values. BLUP predictors are an alternative to the narrowing of biased values, which are based on variances of genotype to determine the response value, as a complement to the selection index (SI). The ESIM (Eigenvalue Selection Index) selects genotypes based on two or more variables or selection characters as long as the economic matrix possesses the appropriate values for highlighting the desired response variable. Three stages of selection were evaluated in an advanced diploid potato improvement program. BLUP values were obtained for the yield and specific gravity variables, used to determine the genetic parameters and the SI. The genetic gain for yield corresponded to 1.228 kg/plant with a heritability (H2) = 0.82, while the GA for GE was 0.02 with an H2 = 0.935. The SI from the BLUP values selected in the final stages of the three new cultivars (Criolla Dorada, Criolla Ocarina and Criolla Sua Pa) was registered at the Instituto Colombiano Agropecuario (ICA). Although BLUE and BLUP are highly correlated, the BLUP/ESIM analysis has an advantage as a predictor because it reduces responses to the environmental effect, efficiently selecting genotypes with a high agronomic potential.Uno de los principales desafíos que enfrentan los mejoradores es la respuesta diferencial de los genotipos de un entorno a otro, conocida como la interacción genotipo × ambiente (GxE). El procedimiento óptimo restringido de máxima verosimilitud/mejor predictor imparcial lineal (REML / BLUP) permite la estimación simultánea de parámetros genéticos y la predicción de valores genotípicos. Los predictores BLUP se presentan como una alternativa al estrechamiento de los valores sesgados. Se basa en las variaciones por genotipo para determinar su valor de respuesta como complemento al índice de selección (SI). El índice de selección (IS) ESIM (Eigenvalue Selection Index) permite seleccionar genotipos basados en dos o más variables o caracteres de selección siempre y cuando la matriz económica posea los valores adecuados para resaltar la variable respuesta deseada. Se evaluaron tres etapas de selección en un programa avanzado de mejoramiento de papa diploide, se obtuvieron los valores BLUP para las variables rendimiento y gravedad específica (GE), y a partir de ellos los parámetros genéticos y el IS. La ganancia genética para rendimiento correspondió a 1.228 kg/planta con una heredabilidad (H2)=0,82, mientras que la GA para GE fue 0,02 con una H2 = 0,935. El IS a partir de los valores BLUP seleccionó en las etapas finales tres nuevos cultivares (Criolla Dorada, Criolla Ocarina y Criolla Sua Pa) que fueron registradas ante el Instituto Colombiano Agropecuario (ICA). Aunque BLUE y BLUP están altamente correlacionadas, el análisis BLUP/ESIM da ventaja al predictor pues reduce las respuestas con efecto ambiental, seleccionando eficientemente genotipos con alto potencial varietal.application/pdfengengSociedad Colombiana de Ciencias Hortícolas-SCCH and Universidad Pedagógica y Tecnológica de Colombia-UPTChttps://revistas.uptc.edu.co/index.php/ciencias_horticolas/article/view/8138/9376Copyright (c) 2020 Revista Colombiana de Ciencias Hortícolashttps://creativecommons.org/licenses/by-nc/4.0/http://purl.org/coar/access_right/c_abf121http://purl.org/coar/access_right/c_abf2Revista Colombiana de Ciencias Hortícolas; Vol. 14 No. 1 (2020); 125-134Revista Colombiana de Ciencias Hortícolas; Vol. 14 Núm. 1 (2020); 125-134Revista Colombiana de Ciencias Hortícolas; Vol. 14 No 1 (2020); 125-134Revista Colombiana de Ciencias Hortícolas; V. 14 N. 1 (2020); 125-134Revista Colombiana de Ciencias Hortícolas; v. 14 n. 1 (2020); 125-1342422-37192011-2173Potato breedingSelection indexESIMGenetic parametersPotatoMejoramiento de papaÍndice de selecciónESIMParámetros genéticosPapaBLUP (Best Linear Unbiased Predictors) analysis for the selection of superior yellow diploid potato genotypes (Solanum tuberosum group Phureja)Análisis BLUP (Best Linear Unbiased Predictors) en etapas avanzadas de selección en papa criolla (Solanum tuberosum Grupo Phureja)TextTextoinfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6620http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/publishedVersionhttp://purl.org/coar/version/c_970fb48d4fbd8a204http://purl.org/coar/version/c_970fb48d4fbd8a85Colombia; CundinamarcaColombia; CundinamarcaPacheco, José E.Urquijo, Johan SebastianDarghan, Aquiles EnriqueRodríguez, Luis Ernesto001/16851oai:repositorio.uptc.edu.co:001/168512025-07-18 11:48:58.403https://creativecommons.org/licenses/by-nc/4.0/metadata.onlyhttps://repositorio.uptc.edu.coRepositorio Institucional UPTCrepositorio.uptc@uptc.edu.co