BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates
UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBM...
- Autores:
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2023
- Institución:
- Universidad Pedagógica y Tecnológica de Colombia
- Repositorio:
- RiUPTC: Repositorio Institucional UPTC
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.uptc.edu.co:001/14369
- Acceso en línea:
- https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525
https://repositorio.uptc.edu.co/handle/001/14369
- Palabra clave:
- Aquatic macroinvertebrates
Bioinformatics platform
Computational fluid dynamics
Subsidence
Software
Colección biológica
Macroinvertebrados acuáticos
Plataforma bioinformática
SCRUM
Ingeniería de software
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by/4.0
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BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| dc.title.es-ES.fl_str_mv |
BiolCol: Plataforma tecnológica para la difusión de la colección biológica de referencia de macroinvertebrados acuáticos |
| title |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
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BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates Aquatic macroinvertebrates Bioinformatics platform Computational fluid dynamics Subsidence Software Colección biológica Macroinvertebrados acuáticos Plataforma bioinformática SCRUM Ingeniería de software |
| title_short |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_full |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_fullStr |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_full_unstemmed |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| title_sort |
BiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic Macroinvertebrates |
| dc.subject.en-US.fl_str_mv |
Aquatic macroinvertebrates Bioinformatics platform Computational fluid dynamics Subsidence Software |
| topic |
Aquatic macroinvertebrates Bioinformatics platform Computational fluid dynamics Subsidence Software Colección biológica Macroinvertebrados acuáticos Plataforma bioinformática SCRUM Ingeniería de software |
| dc.subject.es-ES.fl_str_mv |
Colección biológica Macroinvertebrados acuáticos Plataforma bioinformática SCRUM Ingeniería de software |
| description |
UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBMUS. The design of BioCol was led by three students and the coordinator of the GIBD-SI of the UNISANGIL Systems Engineering Program. The work methodology applied in the development process was Scrum. Additionally, we followed the method Sampieri proposed to identify the needs, establish the objectives, define the scope, formulate the projected activities over time, and define the deliverables for developing the application. Based on the Darwin Core standard used by the Colombian biodiversity information system (SiB Colombia), we designed the system architecture, built models, and designed the database. To develop the interface, we used Laravel for the back end and NodeJS for the front end, and we integrated the images and 3D models of those specimens with available information. The platform allows the online registration, storage, and visualization of information CBMUS collection specimens. It also generates a label with a QR code for each individual, which enables queries of the data stored for each specimen. Overall, this platform aims to facilitate the registration, administration, and dissemination of biological collection information for researchers and the community in general. |
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2023 |
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2024-07-05T19:12:10Z |
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2024-07-05T19:12:10Z |
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2023-05-06 |
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Artículo de revista |
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https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525 10.19053/01211129.v32.n64.2023.15525 |
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https://repositorio.uptc.edu.co/handle/001/14369 |
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10.19053/01211129.v32.n64.2023.15525 |
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eng |
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eng |
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eng |
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https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/12874 https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/13446 |
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Revista Facultad de Ingeniería; Vol. 32 No. 64 (2023): April-June 2023 (Continuous Publication); e15525 |
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Revista Facultad de Ingeniería; Vol. 32 Núm. 64 (2023): Abril-Junio 2023 (Publicación Continua); e15525 |
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2357-5328 0121-1129 |
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2023-05-062024-07-05T19:12:10Z2024-07-05T19:12:10Zhttps://revistas.uptc.edu.co/index.php/ingenieria/article/view/1552510.19053/01211129.v32.n64.2023.15525https://repositorio.uptc.edu.co/handle/001/14369UNISANGIL has one of Colombia's five collections of aquatic macroinvertebrates, being the only one in the Department of Santander. The bioinformatics platform "Biological Collection - BiolCol" seeks to digitize the biological reference collection of macroinvertebrates of UNISANGIL-CBMUS. The design of BioCol was led by three students and the coordinator of the GIBD-SI of the UNISANGIL Systems Engineering Program. The work methodology applied in the development process was Scrum. Additionally, we followed the method Sampieri proposed to identify the needs, establish the objectives, define the scope, formulate the projected activities over time, and define the deliverables for developing the application. Based on the Darwin Core standard used by the Colombian biodiversity information system (SiB Colombia), we designed the system architecture, built models, and designed the database. To develop the interface, we used Laravel for the back end and NodeJS for the front end, and we integrated the images and 3D models of those specimens with available information. The platform allows the online registration, storage, and visualization of information CBMUS collection specimens. It also generates a label with a QR code for each individual, which enables queries of the data stored for each specimen. Overall, this platform aims to facilitate the registration, administration, and dissemination of biological collection information for researchers and the community in general.UNISANGIL posee una de las 5 colecciones de macroinvertebrados acuáticos del país y es la única en el departamento de Santander, a continuación, se describe el proceso de desarrollo de una plataforma bioinformática llamada "Biological Collection - BiolCol" por parte de tres estudiantes y la coordinadora del semillero GIBD-SI del programa de Ingeniería de Sistemas de UNISANGIL, con el objetivo de digitalizar la colección biológica de referencia de macroinvertebrados de UNISANGIL-CBMUS. La metodología de trabajo aplicada en el proceso de desarrollo fue SCRUM, adicionalmente se utilizó la metodología propuesta por el Sampieri para identificar la necesidad, establecer los objetivos, definir el alcance, formular las actividades proyectadas en el tiempo y definir los entregables del proyecto. Se diseñó la arquitectura del sistema, se construyeron modelos y se diseñó la base de datos tomando como referente el estándar Darwin Core utilizado por el sistema de información de biodiversidad de Colombia (SiB Colombia). Para el desarrollo de la interfaz de usuario se utilizaron las herramientas Laravel para el backend y NodeJS para el frontend, se integraron las imágenes y los modelos 3D de los especímenes que tenían la información disponible. La plataforma permite el registro, almacenamiento y visualización de información de los especímenes de la colección CBMUS a través de Internet y genera una etiqueta con código QR para cada individuo que permite la consulta de la información almacenada sobre cada macroinvertebrado registrado. Esta plataforma tiene como objetivo facilitar el registro, la administración y la divulgación de la información de la colección biológica, siendo muy importante para investigadores y la comunidad en general.application/pdftext/xmlengengUniversidad Pedagógica y Tecnológica de Colombiahttps://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/12874https://revistas.uptc.edu.co/index.php/ingenieria/article/view/15525/13446Copyright (c) 2023 Luz-Yamile Caicedo-Chacón, Henry-Javier Barón-González, Juan-Carlos Sánchez-Pedroza, Carlos-Alberto Aguilar-Carreño, Kevin-Santiago Vega-Otálora, Kevin-Giancarlo Borja-Acostahttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Revista Facultad de Ingeniería; Vol. 32 No. 64 (2023): April-June 2023 (Continuous Publication); e15525Revista Facultad de Ingeniería; Vol. 32 Núm. 64 (2023): Abril-Junio 2023 (Publicación Continua); e155252357-53280121-1129Aquatic macroinvertebratesBioinformatics platformComputational fluid dynamicsSubsidenceSoftwareColección biológicaMacroinvertebrados acuáticosPlataforma bioinformáticaSCRUMIngeniería de softwareBiolCol: Technological Platform for the Dissemination of the Biological Reference Collection of Aquatic MacroinvertebratesBiolCol: Plataforma tecnológica para la difusión de la colección biológica de referencia de macroinvertebrados acuáticosArtículo de revistahttp://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionTexthttps://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85Caicedo-Chacón, Luz YamileBarón-González, Henry JavierSánchez-Pedroza, Juan CarlosAguilar-Carreño, Carlos AlbertoVega-Otálora, Kevin SantiagoBorja-Acosta, Kevin GiancarloPublicationORIGINAL12874.htmltext/html32492https://repositorio.uptc.edu.co/bitstreams/aec787d2-3231-49e3-8201-539c2c1e556e/download6abadada5e81e7cfcb258f7ddecddc84MD51trueAnonymousREAD13446.htmltext/html31971https://repositorio.uptc.edu.co/bitstreams/200fd76b-8392-44e4-8b38-0d29aa58043c/downloada7473303d3ac99ab0f2a4afa5f9741e4MD52falseAnonymousREADTEXT12874.html.txt12874.html.txtExtracted texttext/plain5540https://repositorio.uptc.edu.co/bitstreams/0cd53b75-1d00-4218-b644-a4ba44cce216/downloadc3df1f878d857faa50a6f65f77fb7264MD53falseAnonymousREAD13446.html.txt13446.html.txtExtracted texttext/plain5230https://repositorio.uptc.edu.co/bitstreams/2c7e37cb-98bc-44e5-968d-45fad069dc3f/download87466c6571c46f91642dd4d772054685MD54falseAnonymousREAD001/14369oai:repositorio.uptc.edu.co:001/143692026-09-30 09:18:03.122open.accesshttps://repositorio.uptc.edu.coRepositorio Institucional UPTCbdigital@metabiblioteca.com |
