Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering

Algorithms based on the unscented Kalman filter (UKF) have been proposed as an alternative for registration of point clouds obtained from vertebral ultrasound (US) and computerised tomography (CT) scans, effectively handling the US limited depth and low signaltonoise ratio -- Previously proposed met...

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Autores:
Echeverría, Rebeca
Cortes, Camilo
Bertelsen, Alvaro
Macia, Ivan
Ruíz, Óscar E.
Flórez, Julián
Tipo de recurso:
Fecha de publicación:
2016
Institución:
Universidad EAFIT
Repositorio:
Repositorio EAFIT
Idioma:
eng
OAI Identifier:
oai:repository.eafit.edu.co:10784/9793
Acceso en línea:
http://hdl.handle.net/10784/9793
Palabra clave:
TOMOGRAFÍA
FILTRACIÓN KALMAN
ULTRASONIDO EN MEDICINA
MODELOS MATEMÁTICOS
ECUACIONES DIFERENCIALES
PROCESAMIENTO DE IMÁGENES
Tomography
Kalman filtering
Ultrasonics in medicine
Mathematical models
Differential equations
Image processing
Nube de puntos
Imagen médica multimodal
Métodos computacionales
Rights
License
Acceso cerrado
id REPOEAFIT2_869f8f1480f4e83494020bff9221e1d5
oai_identifier_str oai:repository.eafit.edu.co:10784/9793
network_acronym_str REPOEAFIT2
network_name_str Repositorio EAFIT
repository_id_str
dc.title.eng.fl_str_mv Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
title Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
spellingShingle Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
TOMOGRAFÍA
FILTRACIÓN KALMAN
ULTRASONIDO EN MEDICINA
MODELOS MATEMÁTICOS
ECUACIONES DIFERENCIALES
PROCESAMIENTO DE IMÁGENES
Tomography
Kalman filtering
Ultrasonics in medicine
Mathematical models
Differential equations
Image processing
Nube de puntos
Imagen médica multimodal
Métodos computacionales
title_short Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
title_full Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
title_fullStr Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
title_full_unstemmed Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
title_sort Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering
dc.creator.fl_str_mv Echeverría, Rebeca
Cortes, Camilo
Bertelsen, Alvaro
Macia, Ivan
Ruíz, Óscar E.
Flórez, Julián
dc.contributor.department.spa.fl_str_mv Universidad EAFIT. Departamento de Ingeniería Mecánica
dc.contributor.author.none.fl_str_mv Echeverría, Rebeca
Cortes, Camilo
Bertelsen, Alvaro
Macia, Ivan
Ruíz, Óscar E.
Flórez, Julián
dc.contributor.researchgroup.spa.fl_str_mv Laboratorio CAD/CAM/CAE
dc.subject.lemb.spa.fl_str_mv TOMOGRAFÍA
FILTRACIÓN KALMAN
ULTRASONIDO EN MEDICINA
MODELOS MATEMÁTICOS
ECUACIONES DIFERENCIALES
PROCESAMIENTO DE IMÁGENES
topic TOMOGRAFÍA
FILTRACIÓN KALMAN
ULTRASONIDO EN MEDICINA
MODELOS MATEMÁTICOS
ECUACIONES DIFERENCIALES
PROCESAMIENTO DE IMÁGENES
Tomography
Kalman filtering
Ultrasonics in medicine
Mathematical models
Differential equations
Image processing
Nube de puntos
Imagen médica multimodal
Métodos computacionales
dc.subject.keyword.eng.fl_str_mv Tomography
Kalman filtering
Ultrasonics in medicine
Mathematical models
Differential equations
Image processing
dc.subject.keyword.spa.fl_str_mv Nube de puntos
Imagen médica multimodal
Métodos computacionales
description Algorithms based on the unscented Kalman filter (UKF) have been proposed as an alternative for registration of point clouds obtained from vertebral ultrasound (US) and computerised tomography (CT) scans, effectively handling the US limited depth and low signaltonoise ratio -- Previously proposed methods are accurate, but their convergence rate is considerably reduced with initial misalignments of the datasets greater than or 30 mm -- We propose a novel method which increases robustness by adding a coarse alignment of the datasets’ principal components and batchbased point inclusions for the UKF -- Experiments with simulated scans with full coverage of a single vertebra show the method’s capability and accuracy to correct misalignments as large as and 90 mm -- Furthermore, the method registers datasets with varying degrees of missing data and datasets with outlier points coming from adjacent vertebrae
publishDate 2016
dc.date.available.none.fl_str_mv 2016-11-30T15:56:58Z
dc.date.issued.none.fl_str_mv 2016-07
dc.date.accessioned.none.fl_str_mv 2016-11-30T15:56:58Z
dc.type.eng.fl_str_mv info:eu-repo/semantics/bookPart
bookPart
info:eu-repo/semantics/publishedVersion
publishedVersion
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dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_3248
dc.type.local.spa.fl_str_mv Capítulo o parte de un libro
dc.type.hasVersion.spa.fl_str_mv Obra publicada
status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv @Inbook{Echeverri2016, author={Echeverria, Rebeca and Cortes, Camilo and Bertelsen, Alvaro and Macia, Ivan and Ruiz, Oscar E. and Florez, Julian}, editor={Vrtovec, Tomaz and Yao, Jianhua and Glocker, Ben and Klinder, Tobias and Frangi, Alejandro and Zheng, Guoyan and Li, Shuo}, title={Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering}, bookTitle={Computational Methods and Clinical Applications for Spine Imaging: Third International Workshop and Challenge, CSI 2015, Held in Conjunction with MICCAI 2015, Munich, Germany, October 5, 2015, Proceedings}, year={2016}, publisher={Springer International Publishing}, address={Cham}, pages={52--63}, isbn={978-3-319-41827-8}, doi={10.1007/978-3-319-41827-8_5}, url={http://dx.doi.org/10.1007/978-3-319-41827-8_5}
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10784/9793
dc.identifier.doi.none.fl_str_mv 10.1007/978-3-319-41827-8_5
identifier_str_mv @Inbook{Echeverri2016, author={Echeverria, Rebeca and Cortes, Camilo and Bertelsen, Alvaro and Macia, Ivan and Ruiz, Oscar E. and Florez, Julian}, editor={Vrtovec, Tomaz and Yao, Jianhua and Glocker, Ben and Klinder, Tobias and Frangi, Alejandro and Zheng, Guoyan and Li, Shuo}, title={Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering}, bookTitle={Computational Methods and Clinical Applications for Spine Imaging: Third International Workshop and Challenge, CSI 2015, Held in Conjunction with MICCAI 2015, Munich, Germany, October 5, 2015, Proceedings}, year={2016}, publisher={Springer International Publishing}, address={Cham}, pages={52--63}, isbn={978-3-319-41827-8}, doi={10.1007/978-3-319-41827-8_5}, url={http://dx.doi.org/10.1007/978-3-319-41827-8_5}
10.1007/978-3-319-41827-8_5
url http://hdl.handle.net/10784/9793
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartof.spa.fl_str_mv Computational Methods and Clinical Applications for Spine Imaging
dc.relation.isversionof.spa.fl_str_mv https://doi.org/10.1007/978-3-319-41827-8_5
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_14cb
dc.rights.local.spa.fl_str_mv Acceso cerrado
rights_invalid_str_mv Acceso cerrado
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dc.format.eng.fl_str_mv application/pdf
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repository.name.fl_str_mv Repositorio Institucional Universidad EAFIT
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spelling 2016-11-30T15:56:58Z2016-072016-11-30T15:56:58Z@Inbook{Echeverri2016, author={Echeverria, Rebeca and Cortes, Camilo and Bertelsen, Alvaro and Macia, Ivan and Ruiz, Oscar E. and Florez, Julian}, editor={Vrtovec, Tomaz and Yao, Jianhua and Glocker, Ben and Klinder, Tobias and Frangi, Alejandro and Zheng, Guoyan and Li, Shuo}, title={Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering}, bookTitle={Computational Methods and Clinical Applications for Spine Imaging: Third International Workshop and Challenge, CSI 2015, Held in Conjunction with MICCAI 2015, Munich, Germany, October 5, 2015, Proceedings}, year={2016}, publisher={Springer International Publishing}, address={Cham}, pages={52--63}, isbn={978-3-319-41827-8}, doi={10.1007/978-3-319-41827-8_5}, url={http://dx.doi.org/10.1007/978-3-319-41827-8_5}http://hdl.handle.net/10784/979310.1007/978-3-319-41827-8_5Algorithms based on the unscented Kalman filter (UKF) have been proposed as an alternative for registration of point clouds obtained from vertebral ultrasound (US) and computerised tomography (CT) scans, effectively handling the US limited depth and low signaltonoise ratio -- Previously proposed methods are accurate, but their convergence rate is considerably reduced with initial misalignments of the datasets greater than or 30 mm -- We propose a novel method which increases robustness by adding a coarse alignment of the datasets’ principal components and batchbased point inclusions for the UKF -- Experiments with simulated scans with full coverage of a single vertebra show the method’s capability and accuracy to correct misalignments as large as and 90 mm -- Furthermore, the method registers datasets with varying degrees of missing data and datasets with outlier points coming from adjacent vertebraepp.52 - 63application/pdfengComputational Methods and Clinical Applications for Spine Imaginghttps://doi.org/10.1007/978-3-319-41827-8_5Robust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filteringinfo:eu-repo/semantics/bookPartbookPartinfo:eu-repo/semantics/publishedVersionpublishedVersionCapítulo o parte de un libroObra publicadahttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_3248Acceso cerradohttp://purl.org/coar/access_right/c_14cbTOMOGRAFÍAFILTRACIÓN KALMANULTRASONIDO EN MEDICINAMODELOS MATEMÁTICOSECUACIONES DIFERENCIALESPROCESAMIENTO DE IMÁGENESTomographyKalman filteringUltrasonics in medicineMathematical modelsDifferential equationsImage processingNube de puntosImagen médica multimodalMétodos computacionalesUniversidad EAFIT. Departamento de Ingeniería MecánicaEcheverría, Rebecaeb78384e-4e95-4ed6-b82a-9793629619ba-1Cortes, Camilo3d4f0ac7-106e-4fc5-9477-dba9ac7245b6-1Bertelsen, Alvaroa8d8274e-3d71-43e0-a2d8-1f9ccaf6922e-1Macia, Ivan94e64248-d5ad-4917-ba26-d739c5b09000-1Ruíz, Óscar E.79da89a9-56e7-4e32-9960-e465497e926e-1Flórez, Juliána5bca711-746a-43ec-91c2-52025d81daa2-1Laboratorio CAD/CAM/CAEORIGINALRobust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering - Springer.pdfRobust CT to US 3D-3D Registration by Using Principal Component Analysis and Kalman Filtering - Springer.pdfapplication/pdf278436https://repository.eafit.edu.co/bitstreams/a8fba452-c301-4852-81c1-a820358bf84b/download7abc15214f17de653f8018bcbbd849eaMD522016_ChBook_Robust_CT_SpringerSite.pdf2016_ChBook_Robust_CT_SpringerSite.pdfapplication/pdf436661https://repository.eafit.edu.co/bitstreams/f19538c7-dc78-4e60-aae2-7a5bfeeb42e0/download7a2033d9cb138452fb112dfc6d5ac9beMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-82556https://repository.eafit.edu.co/bitstreams/643b5b14-dab3-4b8d-b806-7f74ef1e5b15/download76025f86b095439b7ac65b367055d40cMD5310784/9793oai:repository.eafit.edu.co:10784/97932024-12-04 11:49:11.851restrictedhttps://repository.eafit.edu.coRepositorio Institucional Universidad EAFITrepositorio@eafit.edu.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