Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales)
The strain Purpureocillium sp. UdeA0106 is an antagonist of nematodes, fungi, and garden symphylans from crops with high economic importance in Colombia (Salazar 2013; Salazar et al. 2014; Cardona et al. 2014; Gallego et al. 2014) and is being studied to be proposed as new species. It was included o...
- Autores:
-
Cardona N.L.
Franco-Sierra N.D.
Correa Alvarez J.
- Tipo de recurso:
- Fecha de publicación:
- 2018
- Institución:
- Universidad EAFIT
- Repositorio:
- Repositorio EAFIT
- Idioma:
- eng
- OAI Identifier:
- oai:repository.eafit.edu.co:10784/26741
- Acceso en línea:
- https://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=8369
http://hdl.handle.net/10784/26741
- Palabra clave:
- nematophagous
fungus
Purpureocillium
sp
fungal
biocontrol
agent
symphylans
biocontrol
Whole
mitogenome
- Rights
- License
- https://v2.sherpa.ac.uk/id/publication/issn/2380-2359
id |
REPOEAFIT2_5084294ba768910ca822c3c191329de0 |
---|---|
oai_identifier_str |
oai:repository.eafit.edu.co:10784/26741 |
network_acronym_str |
REPOEAFIT2 |
network_name_str |
Repositorio EAFIT |
repository_id_str |
|
spelling |
2021-03-23T19:52:08Z2018-01-012021-03-23T19:52:08Zhttps://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=836923802359WOS;000448453700001PUBMED;33474450SCOPUS;2-s2.0-85055437131http://hdl.handle.net/10784/2674110.1080/23802359.2018.1522982The strain Purpureocillium sp. UdeA0106 is an antagonist of nematodes, fungi, and garden symphylans from crops with high economic importance in Colombia (Salazar 2013; Salazar et al. 2014; Cardona et al. 2014; Gallego et al. 2014) and is being studied to be proposed as new species. It was included on the 1000 fungal genomes project to elucidate its phylogenetic relationships with other fungi. Purpureocillium’s mitogenome has 23,495 bp of circular size. It contains 15 protein-coding genes without duplications (PCGs), corresponding to the 60% of its total length, 23 transfer genes (7.6% tRNA), two of them duplicated (trnR and trnM), and two ribosomal genes (17.6% rRNA) and a GC content of 28.44%. A phylogenetic tree was proposed using their 14 PCGs mitochondrial genes and was compared with other fungi of the Subphylum Pezizomycotina. Phylogenetics relationships showed UdeA0106 to be close to P. chlamydosporia and M. anisopliae forming a cluster with other fungal biocontrol agents and separated the strain of plant pathogenic fungi. © 2018, © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.engTaylor and Francis Ltd.https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055437131&doi=10.1080%2f23802359.2018.1522982&partnerID=40&md5=a6a78e923a70d6e9e5dea5e62ffd7f1chttps://v2.sherpa.ac.uk/id/publication/issn/2380-2359Acceso abiertohttp://purl.org/coar/access_right/c_abf2MITOCHONDRIAL DNA PART B-RESOURCESnematophagousfungusPurpureocilliumspfungalbiocontrolagentsymphylansbiocontrolWholemitogenomeComplete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales)acceptedVersioninfo:eu-repo/semantics/acceptedVersionarticleinfo:eu-repo/semantics/articleArtículohttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1Universidad EAFIT. Departamento de CienciasCardona N.L.Franco-Sierra N.D.Correa Alvarez J.Biodiversidad, Evolución y ConservaciónMITOCHONDRIAL DNA PART B-RESOURCESORIGINALComplete mitogenome of the biocontroller fungus Purpureocillium sp Ascomycota Ophiocordycipitaceae Hypocreales.pdfComplete mitogenome of the biocontroller fungus Purpureocillium sp Ascomycota Ophiocordycipitaceae Hypocreales.pdfapplication/pdf1317909https://repository.eafit.edu.co/bitstreams/36b4c6a9-e202-4e51-b31d-8bace6be59e5/downloaddd84ff818e71d7e8115f3f1715ccc1ebMD5110784/26741oai:repository.eafit.edu.co:10784/267412022-08-18 14:23:26.808open.accesshttps://repository.eafit.edu.coRepositorio Institucional Universidad EAFITrepositorio@eafit.edu.co |
dc.title.eng.fl_str_mv |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
title |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
spellingShingle |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) nematophagous fungus Purpureocillium sp fungal biocontrol agent symphylans biocontrol Whole mitogenome |
title_short |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
title_full |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
title_fullStr |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
title_full_unstemmed |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
title_sort |
Complete mitogenome of the biocontroller fungus Purpureocillium sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales) |
dc.creator.fl_str_mv |
Cardona N.L. Franco-Sierra N.D. Correa Alvarez J. |
dc.contributor.department.spa.fl_str_mv |
Universidad EAFIT. Departamento de Ciencias |
dc.contributor.author.none.fl_str_mv |
Cardona N.L. Franco-Sierra N.D. Correa Alvarez J. |
dc.contributor.researchgroup.spa.fl_str_mv |
Biodiversidad, Evolución y Conservación |
dc.subject.eng.fl_str_mv |
nematophagous fungus Purpureocillium sp fungal biocontrol agent symphylans biocontrol Whole mitogenome |
topic |
nematophagous fungus Purpureocillium sp fungal biocontrol agent symphylans biocontrol Whole mitogenome |
description |
The strain Purpureocillium sp. UdeA0106 is an antagonist of nematodes, fungi, and garden symphylans from crops with high economic importance in Colombia (Salazar 2013; Salazar et al. 2014; Cardona et al. 2014; Gallego et al. 2014) and is being studied to be proposed as new species. It was included on the 1000 fungal genomes project to elucidate its phylogenetic relationships with other fungi. Purpureocillium’s mitogenome has 23,495 bp of circular size. It contains 15 protein-coding genes without duplications (PCGs), corresponding to the 60% of its total length, 23 transfer genes (7.6% tRNA), two of them duplicated (trnR and trnM), and two ribosomal genes (17.6% rRNA) and a GC content of 28.44%. A phylogenetic tree was proposed using their 14 PCGs mitochondrial genes and was compared with other fungi of the Subphylum Pezizomycotina. Phylogenetics relationships showed UdeA0106 to be close to P. chlamydosporia and M. anisopliae forming a cluster with other fungal biocontrol agents and separated the strain of plant pathogenic fungi. © 2018, © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. |
publishDate |
2018 |
dc.date.issued.none.fl_str_mv |
2018-01-01 |
dc.date.available.none.fl_str_mv |
2021-03-23T19:52:08Z |
dc.date.accessioned.none.fl_str_mv |
2021-03-23T19:52:08Z |
dc.type.eng.fl_str_mv |
acceptedVersion info:eu-repo/semantics/acceptedVersion article info:eu-repo/semantics/article |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.local.spa.fl_str_mv |
Artículo |
status_str |
acceptedVersion |
dc.identifier.none.fl_str_mv |
https://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=8369 |
dc.identifier.issn.none.fl_str_mv |
23802359 |
dc.identifier.other.none.fl_str_mv |
WOS;000448453700001 PUBMED;33474450 SCOPUS;2-s2.0-85055437131 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10784/26741 |
dc.identifier.doi.none.fl_str_mv |
10.1080/23802359.2018.1522982 |
url |
https://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=8369 http://hdl.handle.net/10784/26741 |
identifier_str_mv |
23802359 WOS;000448453700001 PUBMED;33474450 SCOPUS;2-s2.0-85055437131 10.1080/23802359.2018.1522982 |
dc.language.iso.eng.fl_str_mv |
eng |
language |
eng |
dc.relation.uri.none.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85055437131&doi=10.1080%2f23802359.2018.1522982&partnerID=40&md5=a6a78e923a70d6e9e5dea5e62ffd7f1c |
dc.rights.none.fl_str_mv |
https://v2.sherpa.ac.uk/id/publication/issn/2380-2359 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.local.spa.fl_str_mv |
Acceso abierto |
rights_invalid_str_mv |
https://v2.sherpa.ac.uk/id/publication/issn/2380-2359 Acceso abierto http://purl.org/coar/access_right/c_abf2 |
dc.publisher.none.fl_str_mv |
Taylor and Francis Ltd. |
publisher.none.fl_str_mv |
Taylor and Francis Ltd. |
dc.source.none.fl_str_mv |
MITOCHONDRIAL DNA PART B-RESOURCES |
institution |
Universidad EAFIT |
bitstream.url.fl_str_mv |
https://repository.eafit.edu.co/bitstreams/36b4c6a9-e202-4e51-b31d-8bace6be59e5/download |
bitstream.checksum.fl_str_mv |
dd84ff818e71d7e8115f3f1715ccc1eb |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 |
repository.name.fl_str_mv |
Repositorio Institucional Universidad EAFIT |
repository.mail.fl_str_mv |
repositorio@eafit.edu.co |
_version_ |
1814110187029528576 |