Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives

Due to their similarity to natural counterparts, nucleic acid derivatives (nucleobases, nucleosides, and nucleotides, among others) are interesting molecules for pharmaceutical, biomedical, or food industries. For this reason, there is increasing worldwide demand for the development of efficient syn...

Full description

Autores:
Del Arco, Jon
Fernandez Lucas, Jesus
Tipo de recurso:
Article of journal
Fecha de publicación:
2018
Institución:
Corporación Universidad de la Costa
Repositorio:
REDICUC - Repositorio CUC
Idioma:
eng
OAI Identifier:
oai:repositorio.cuc.edu.co:11323/1056
Acceso en línea:
http://hdl.handle.net/11323/1056
https://repositorio.cuc.edu.co/
Palabra clave:
Bioprocesses
Enzymatic Production
Extremophiles
Salvage Pathway
Rights
openAccess
License
Atribución – No comercial – Compartir igual
id RCUC2_55e2ecc2f64176c6d91753f21a7edb9a
oai_identifier_str oai:repositorio.cuc.edu.co:11323/1056
network_acronym_str RCUC2
network_name_str REDICUC - Repositorio CUC
repository_id_str
dc.title.eng.fl_str_mv Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
title Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
spellingShingle Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
Bioprocesses
Enzymatic Production
Extremophiles
Salvage Pathway
title_short Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
title_full Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
title_fullStr Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
title_full_unstemmed Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
title_sort Purine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid Derivatives
dc.creator.fl_str_mv Del Arco, Jon
Fernandez Lucas, Jesus
dc.contributor.author.spa.fl_str_mv Del Arco, Jon
Fernandez Lucas, Jesus
dc.subject.eng.fl_str_mv Bioprocesses
Enzymatic Production
Extremophiles
Salvage Pathway
topic Bioprocesses
Enzymatic Production
Extremophiles
Salvage Pathway
description Due to their similarity to natural counterparts, nucleic acid derivatives (nucleobases, nucleosides, and nucleotides, among others) are interesting molecules for pharmaceutical, biomedical, or food industries. For this reason, there is increasing worldwide demand for the development of efficient synthetic processes for these compounds. Chemical synthetic methodologies require numerous protection-deprotection steps and often lead to the presence of undesirable by-products or enantiomeric mixtures. These methods also require harsh operating conditions, such as the use of organic solvents and hazard reagents. Conversely, enzymatic production by whole cells or enzymes improves regio-, stereo-, and enantioselectivity and provides an eco-friendly alternative. Because of their essential role in purine and pyrimidine scavenging, enzymes from purine and pyrimidine salvage pathways are valuable candidates for the synthesis of many different nucleic acid components. In recent years, many different enzymes from these routes, such as nucleoside phosphorylases, nucleoside kinases, 2′-deoxyribosyltransferases, phosphoribosyl transferases, or deaminases, have been successfully employed as biocatalysts in the production of nucleobase, nucleoside, or nucleotide analogs. Due to their great activity and stability at extremely high temperatures, the use of enzymes from thermophiles in industrial biocatalysis is gaining momentum. Thermophilic enzymes not only display unique characteristics such as temperature, chemical, and pH stability but also provide many different advantages from an industrial perspective. This mini-review aims to cover the most representative enzymatic approaches for the synthesis of nucleic acid derivatives. In this regard, we provide detailed comments about enzymes involved in crucial steps of purine and pyrimidine salvage pathways in thermophiles, as well as their biological role, biochemical characterization, active site mechanism, and substrate specificity. In addition, the most interesting synthetic examples reported in the literature are also included.
publishDate 2018
dc.date.accessioned.none.fl_str_mv 2018-11-15T20:14:57Z
dc.date.available.none.fl_str_mv 2018-11-15T20:14:57Z
dc.date.issued.none.fl_str_mv 2018-07-11
dc.type.spa.fl_str_mv Artículo de revista
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.content.spa.fl_str_mv Text
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.redcol.spa.fl_str_mv http://purl.org/redcol/resource_type/ART
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/acceptedVersion
format http://purl.org/coar/resource_type/c_6501
status_str acceptedVersion
dc.identifier.issn.spa.fl_str_mv 0175-7598
dc.identifier.uri.spa.fl_str_mv http://hdl.handle.net/11323/1056
dc.identifier.instname.spa.fl_str_mv Corporación Universidad de la Costa
dc.identifier.reponame.spa.fl_str_mv REDICUC - Repositorio CUC
dc.identifier.repourl.spa.fl_str_mv https://repositorio.cuc.edu.co/
identifier_str_mv 0175-7598
Corporación Universidad de la Costa
REDICUC - Repositorio CUC
url http://hdl.handle.net/11323/1056
https://repositorio.cuc.edu.co/
dc.language.iso.none.fl_str_mv eng
language eng
dc.rights.spa.fl_str_mv Atribución – No comercial – Compartir igual
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv Atribución – No comercial – Compartir igual
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.publisher.spa.fl_str_mv Applied Microbiology And Biotechnology
institution Corporación Universidad de la Costa
bitstream.url.fl_str_mv https://repositorio.cuc.edu.co/bitstream/11323/1056/1/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdf
https://repositorio.cuc.edu.co/bitstream/11323/1056/2/license.txt
https://repositorio.cuc.edu.co/bitstream/11323/1056/4/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdf.jpg
https://repositorio.cuc.edu.co/bitstream/11323/1056/5/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdf.txt
bitstream.checksum.fl_str_mv c93e391ea75c0efc3d2adc2b458f6006
8a4605be74aa9ea9d79846c1fba20a33
d63ad4d3b7aea434575345ce2f388772
1243599d373874db9e9d428f10ee248a
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Universidad de La Costa
repository.mail.fl_str_mv bdigital@metabiblioteca.com
_version_ 1808400252413149184
spelling Del Arco, Jon923cae3a1d238f02847617e53bdc6387Fernandez Lucas, Jesus8a93c53d89f531d9974dd13de076402b2018-11-15T20:14:57Z2018-11-15T20:14:57Z2018-07-110175-7598http://hdl.handle.net/11323/1056Corporación Universidad de la CostaREDICUC - Repositorio CUChttps://repositorio.cuc.edu.co/Due to their similarity to natural counterparts, nucleic acid derivatives (nucleobases, nucleosides, and nucleotides, among others) are interesting molecules for pharmaceutical, biomedical, or food industries. For this reason, there is increasing worldwide demand for the development of efficient synthetic processes for these compounds. Chemical synthetic methodologies require numerous protection-deprotection steps and often lead to the presence of undesirable by-products or enantiomeric mixtures. These methods also require harsh operating conditions, such as the use of organic solvents and hazard reagents. Conversely, enzymatic production by whole cells or enzymes improves regio-, stereo-, and enantioselectivity and provides an eco-friendly alternative. Because of their essential role in purine and pyrimidine scavenging, enzymes from purine and pyrimidine salvage pathways are valuable candidates for the synthesis of many different nucleic acid components. In recent years, many different enzymes from these routes, such as nucleoside phosphorylases, nucleoside kinases, 2′-deoxyribosyltransferases, phosphoribosyl transferases, or deaminases, have been successfully employed as biocatalysts in the production of nucleobase, nucleoside, or nucleotide analogs. Due to their great activity and stability at extremely high temperatures, the use of enzymes from thermophiles in industrial biocatalysis is gaining momentum. Thermophilic enzymes not only display unique characteristics such as temperature, chemical, and pH stability but also provide many different advantages from an industrial perspective. This mini-review aims to cover the most representative enzymatic approaches for the synthesis of nucleic acid derivatives. In this regard, we provide detailed comments about enzymes involved in crucial steps of purine and pyrimidine salvage pathways in thermophiles, as well as their biological role, biochemical characterization, active site mechanism, and substrate specificity. In addition, the most interesting synthetic examples reported in the literature are also included.engApplied Microbiology And BiotechnologyAtribución – No comercial – Compartir igualinfo:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2BioprocessesEnzymatic ProductionExtremophilesSalvage PathwayPurine And Pyrimidine Salvage Pathway In Thermophiles: A Valuable Source Of Biocatalysts For The Industrial Production Of Nucleic Acid DerivativesArtículo de revistahttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1Textinfo:eu-repo/semantics/articlehttp://purl.org/redcol/resource_type/ARTinfo:eu-repo/semantics/acceptedVersionORIGINALPurine and pyrimidine salvage pathway in thermophiles.pdfPurine and pyrimidine salvage pathway in thermophiles.pdfapplication/pdf1658843https://repositorio.cuc.edu.co/bitstream/11323/1056/1/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdfc93e391ea75c0efc3d2adc2b458f6006MD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.cuc.edu.co/bitstream/11323/1056/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52open accessTHUMBNAILPurine and pyrimidine salvage pathway in thermophiles.pdf.jpgPurine and pyrimidine salvage pathway in thermophiles.pdf.jpgimage/jpeg51050https://repositorio.cuc.edu.co/bitstream/11323/1056/4/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdf.jpgd63ad4d3b7aea434575345ce2f388772MD54open accessTEXTPurine and pyrimidine salvage pathway in thermophiles.pdf.txtPurine and pyrimidine salvage pathway in thermophiles.pdf.txttext/plain77910https://repositorio.cuc.edu.co/bitstream/11323/1056/5/Purine%20and%20pyrimidine%20salvage%20pathway%20in%20thermophiles.pdf.txt1243599d373874db9e9d428f10ee248aMD55open access11323/1056oai:repositorio.cuc.edu.co:11323/10562023-12-14 17:42:55.055open accessRepositorio Universidad de La Costabdigital@metabiblioteca.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