Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP

Using Response Surface Methodology (RSM) we evaluated the culture conditions (nitrogen source, carbon source, pH and agitation rate) that increase the biomass of Acidocella facilis strain USBA-GBX-505 and therefore enhance the production of its lipolytic enzyme, 505 LIP. RSM results revealed that ye...

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article
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2017
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Pontificia Universidad Javeriana
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Repositorio Universidad Javeriana
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eng
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oai:repository.javeriana.edu.co:10554/31581
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http://revistas.javeriana.edu.co/index.php/scientarium/article/view/15356
http://hdl.handle.net/10554/31581
Palabra clave:
Microbiology
lipases; acidophiles; Acidocella facilis; stability in solvents; Plackett-Burman design; central composite design.
Enzymes
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Copyright (c) 2017 Universitas Scientiarum
id JAVERIANA_778cd753419154a4c6f1e1baa43cbf43
oai_identifier_str oai:repository.javeriana.edu.co:10554/31581
network_acronym_str JAVERIANA
network_name_str Repositorio Universidad Javeriana
repository_id_str
dc.title.none.fl_str_mv Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
title Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
spellingShingle Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
Bernal, Luisa Fernanda; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Microbiology
lipases; acidophiles; Acidocella facilis; stability in solvents; Plackett-Burman design; central composite design.
Enzymes
title_short Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
title_full Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
title_fullStr Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
title_full_unstemmed Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
title_sort Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIP
dc.creator.none.fl_str_mv Bernal, Luisa Fernanda; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Lopez, Gina; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Ruiz, Monica; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Vera-Bravo, Ricardo; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Reyes, Alejandro; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Baena, Sandra; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
author Bernal, Luisa Fernanda; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
author_facet Bernal, Luisa Fernanda; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Lopez, Gina; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Ruiz, Monica; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Vera-Bravo, Ricardo; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Reyes, Alejandro; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Baena, Sandra; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
author_role author
author2 Lopez, Gina; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Ruiz, Monica; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
Vera-Bravo, Ricardo; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Reyes, Alejandro; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - Colombia
Baena, Sandra; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Pontificia Universidad Javeriana (Project ID 4269) and Colciencias – Sena. (Project 6570-392-199990).
dc.subject.none.fl_str_mv Microbiology
lipases; acidophiles; Acidocella facilis; stability in solvents; Plackett-Burman design; central composite design.
Enzymes
topic Microbiology
lipases; acidophiles; Acidocella facilis; stability in solvents; Plackett-Burman design; central composite design.
Enzymes
description Using Response Surface Methodology (RSM) we evaluated the culture conditions (nitrogen source, carbon source, pH and agitation rate) that increase the biomass of Acidocella facilis strain USBA-GBX-505 and therefore enhance the production of its lipolytic enzyme, 505 LIP. RSM results revealed that yeast extract and agitation were key culture factors that increased the growth-associated lipolytic activity by 4.5-fold (from 0.13 U.mg-1 to 0.6 U.mg-1). The 505 LIP lipase was partially purified using size-exclusion chromatography and ion-exchange chromatography. Its molecular weight was >77 kDa. The enzyme shows its optimum catalytic activity at 55 °C and pH 7.5. EDTA, PMSF, 1-butanol and DMSO inhibited enzymatic activity, whereas Tween 20, acetone, glycerol and methanol increased it. Metallic ions are not required for the activity of 505 LIP, and even have an inhibitory effect on the enzyme. This study shows the potential use of A. facilis strain USBA-GBX-505 for the production of a newly identified lipolytic enzyme, 505 LIP, which is stable at moderate temperatures and in the presence of organic solvents. These are important characteristics for the synthesis of many useful products.
publishDate 2017
dc.date.none.fl_str_mv 2017-02-20
2018-02-24T16:00:11Z
2018-02-24T16:00:11Z
2020-04-15T18:07:59Z
2020-04-15T18:07:59Z
dc.type.none.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
Artículo de revista
http://purl.org/coar/resource_type/c_6501
info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://revistas.javeriana.edu.co/index.php/scientarium/article/view/15356
10.11144/Javeriana.SC22-1.rsmr
2027-1352
0122-7483
http://hdl.handle.net/10554/31581
url http://revistas.javeriana.edu.co/index.php/scientarium/article/view/15356
http://hdl.handle.net/10554/31581
identifier_str_mv 10.11144/Javeriana.SC22-1.rsmr
2027-1352
0122-7483
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv http://revistas.javeriana.edu.co/index.php/scientarium/article/view/15356/14569
http://revistas.javeriana.edu.co/index.php/scientarium/article/downloadSuppFile/15356/9772
Universitas Scientiarum; Vol 22, No 1 (2017); 45-70
Universitas Scientiarum; Vol 22, No 1 (2017); 45-70
Universitas Scientiarum; Vol 22, No 1 (2017); 45-70
dc.rights.none.fl_str_mv Copyright (c) 2017 Universitas Scientiarum
Creative Commons Attribution 4.0 International Public License
Atribución-NoComercial-SinDerivadas 4.0 Internacional
info:eu-repo/semantics/openAccess
http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv Copyright (c) 2017 Universitas Scientiarum
Creative Commons Attribution 4.0 International Public License
Atribución-NoComercial-SinDerivadas 4.0 Internacional
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv PDF
application/pdf
dc.coverage.none.fl_str_mv Colombia
null
null
dc.publisher.none.fl_str_mv Pontificia Universidad Javeriana
publisher.none.fl_str_mv Pontificia Universidad Javeriana
dc.source.none.fl_str_mv reponame:Repositorio Universidad Javeriana
instname:Pontificia Universidad Javeriana
instacron:Pontificia Universidad Javeriana
instname_str Pontificia Universidad Javeriana
instacron_str Pontificia Universidad Javeriana
institution Pontificia Universidad Javeriana
reponame_str Repositorio Universidad Javeriana
collection Repositorio Universidad Javeriana
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spelling Response Surface Methodology (RSM) for analysing culture conditions of Acidocella facilis strain USBA-GBX-505 and Partial Purification and Biochemical Characterization of Lipase 505 LIPBernal, Luisa Fernanda; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.Lopez, Gina; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.Ruiz, Monica; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.Vera-Bravo, Ricardo; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - ColombiaReyes, Alejandro; Química de Macromoléculas. Facultad de Ciencias, Pontificia Universidad Javeriana. POB 56710, Bogotá D.C. - ColombiaBaena, Sandra; Colombian Centre for Genomics and Bioinformatics of Extreme Environments - GeBiX. Carrera 5 No. 66A-34, 110231, Bogotá D.C. - Colombia. Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Facultad de Ciencias, Pontificia Universidad Javeriana, POB 56710, Bogotá D.C. - Colombia.Microbiologylipases; acidophiles; Acidocella facilis; stability in solvents; Plackett-Burman design; central composite design.EnzymesUsing Response Surface Methodology (RSM) we evaluated the culture conditions (nitrogen source, carbon source, pH and agitation rate) that increase the biomass of Acidocella facilis strain USBA-GBX-505 and therefore enhance the production of its lipolytic enzyme, 505 LIP. RSM results revealed that yeast extract and agitation were key culture factors that increased the growth-associated lipolytic activity by 4.5-fold (from 0.13 U.mg-1 to 0.6 U.mg-1). The 505 LIP lipase was partially purified using size-exclusion chromatography and ion-exchange chromatography. Its molecular weight was >77 kDa. The enzyme shows its optimum catalytic activity at 55 °C and pH 7.5. EDTA, PMSF, 1-butanol and DMSO inhibited enzymatic activity, whereas Tween 20, acetone, glycerol and methanol increased it. Metallic ions are not required for the activity of 505 LIP, and even have an inhibitory effect on the enzyme. This study shows the potential use of A. facilis strain USBA-GBX-505 for the production of a newly identified lipolytic enzyme, 505 LIP, which is stable at moderate temperatures and in the presence of organic solvents. These are important characteristics for the synthesis of many useful products.Pontificia Universidad JaverianaPontificia Universidad Javeriana (Project ID 4269) and Colciencias – Sena. (Project 6570-392-199990).2018-02-24T16:00:11Z2020-04-15T18:07:59Z2018-02-24T16:00:11Z2020-04-15T18:07:59Z2017-02-20http://purl.org/coar/version/c_970fb48d4fbd8a85Artículo de revistahttp://purl.org/coar/resource_type/c_6501info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionPDFapplication/pdfhttp://revistas.javeriana.edu.co/index.php/scientarium/article/view/1535610.11144/Javeriana.SC22-1.rsmr2027-13520122-7483http://hdl.handle.net/10554/31581enghttp://revistas.javeriana.edu.co/index.php/scientarium/article/view/15356/14569http://revistas.javeriana.edu.co/index.php/scientarium/article/downloadSuppFile/15356/9772Universitas Scientiarum; Vol 22, No 1 (2017); 45-70Universitas Scientiarum; Vol 22, No 1 (2017); 45-70Universitas Scientiarum; Vol 22, No 1 (2017); 45-70ColombianullnullCopyright (c) 2017 Universitas ScientiarumCreative Commons Attribution 4.0 International Public LicenseAtribución-NoComercial-SinDerivadas 4.0 Internacionalinfo:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2reponame:Repositorio Universidad Javerianainstname:Pontificia Universidad Javerianainstacron:Pontificia Universidad Javeriana2023-03-28T21:15:34Z