Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.

Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association w...

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Autores:
Cañas Dávila, Carlos Alberto
Cherñavsky, Alejandra
Nath, Swapan K.
James, Judith A.
Moser, Kathy L.
Cobb, Beth
Brun, Johan G.
Bolstad, Anne Isine
Jonsson, Roland
Bohnsack, John
Rojas Villarraga, Adriana
Prahalad, Sampath
Anaya, Juan Manuel
Tipo de recurso:
Article of investigation
Fecha de publicación:
2012
Institución:
Universidad ICESI
Repositorio:
Repositorio ICESI
Idioma:
eng
OAI Identifier:
oai:repository.icesi.edu.co:10906/78472
Acceso en línea:
http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1
http://hdl.handle.net/10906/78472
http://dx.doi.org/10.1016/j.autrev.2011.07.007
Palabra clave:
ITGAM
Enfermedades autoinmunes
Predisposicion genética
Lupus eritematoso sistémico
Ciencias socio biomédicas
Evaluación genética
Medical sciences
Rights
openAccess
License
https://creativecommons.org/licenses/by-nc-nd/4.0/
id ICESI2_781399ebf78344bb07c80e2a4d1db8de
oai_identifier_str oai:repository.icesi.edu.co:10906/78472
network_acronym_str ICESI2
network_name_str Repositorio ICESI
repository_id_str
dc.title.spa.fl_str_mv Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
title Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
spellingShingle Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
ITGAM
Enfermedades autoinmunes
Predisposicion genética
Lupus eritematoso sistémico
Ciencias socio biomédicas
Evaluación genética
Medical sciences
title_short Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
title_full Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
title_fullStr Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
title_full_unstemmed Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
title_sort Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
dc.creator.fl_str_mv Cañas Dávila, Carlos Alberto
Cherñavsky, Alejandra
Nath, Swapan K.
James, Judith A.
Moser, Kathy L.
Cobb, Beth
Brun, Johan G.
Bolstad, Anne Isine
Jonsson, Roland
Bohnsack, John
Rojas Villarraga, Adriana
Prahalad, Sampath
Anaya, Juan Manuel
dc.contributor.author.spa.fl_str_mv Cañas Dávila, Carlos Alberto
Cherñavsky, Alejandra
Nath, Swapan K.
James, Judith A.
Moser, Kathy L.
Cobb, Beth
Brun, Johan G.
Bolstad, Anne Isine
Jonsson, Roland
Bohnsack, John
Rojas Villarraga, Adriana
Prahalad, Sampath
Anaya, Juan Manuel
dc.subject.none.fl_str_mv ITGAM
topic ITGAM
Enfermedades autoinmunes
Predisposicion genética
Lupus eritematoso sistémico
Ciencias socio biomédicas
Evaluación genética
Medical sciences
dc.subject.spa.fl_str_mv Enfermedades autoinmunes
Predisposicion genética
Lupus eritematoso sistémico
Ciencias socio biomédicas
Evaluación genética
dc.subject.eng.fl_str_mv Medical sciences
description Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p(meta)=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis.
publishDate 2012
dc.date.issued.none.fl_str_mv 2012-02-12
dc.date.accessioned.none.fl_str_mv 2015-10-13T21:05:57Z
dc.date.available.none.fl_str_mv 2015-10-13T21:05:57Z
dc.type.eng.fl_str_mv info:eu-repo/semantics/article
dc.type.coar.none.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.local.spa.fl_str_mv Artículo
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
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identifier_str_mv 0896-8411
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url http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1
http://hdl.handle.net/10906/78472
http://dx.doi.org/10.1016/j.autrev.2011.07.007
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Autoimmunity Reviews, Volume 11, Issue 4 - 2012, Pages 276-280
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
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dc.coverage.spatial.none.fl_str_mv Amsterdam de Lat: 52 21 00 N degrees minutes Lat: 52.3500 decimal degrees Long: 004 55 00 E degrees minutes Long: 4.9167 decimal degrees
dc.publisher.none.fl_str_mv Elsevier
dc.publisher.faculty.spa.fl_str_mv Facultad Ciencias de la Salud
dc.publisher.program.spa.fl_str_mv Medicina
dc.publisher.department.spa.fl_str_mv Departamento de Ciencias Básicas Médicas
dc.publisher.place.none.fl_str_mv Amsterdam
publisher.none.fl_str_mv Elsevier
institution Universidad ICESI
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spelling Cañas Dávila, Carlos AlbertoCherñavsky, AlejandraNath, Swapan K.James, Judith A.Moser, Kathy L.Cobb, BethBrun, Johan G.Bolstad, Anne IsineJonsson, RolandBohnsack, JohnRojas Villarraga, AdrianaPrahalad, SampathAnaya, Juan ManuelAmsterdam de Lat: 52 21 00 N degrees minutes Lat: 52.3500 decimal degrees Long: 004 55 00 E degrees minutes Long: 4.9167 decimal degrees2015-10-13T21:05:57Z2015-10-13T21:05:57Z2012-02-120896-8411http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1http://hdl.handle.net/10906/78472http://dx.doi.org/10.1016/j.autrev.2011.07.007instname: Universidad Icesireponame: Biblioteca Digitalrepourl: https://repository.icesi.edu.co/Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p(meta)=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis.4Digitalapplication/pdfengElsevierFacultad Ciencias de la SaludMedicinaDepartamento de Ciencias Básicas MédicasAmsterdamAutoimmunity Reviews, Volume 11, Issue 4 - 2012, Pages 276-280EL AUTOR, expresa que la obra objeto de la presente autorización es original y la elaboró sin quebrantar ni suplantar los derechos de autor de terceros, y de tal forma, la obra es de su exclusiva autoría y tiene la titularidad sobre éste. PARÁGRAFO: en caso de queja o acción por parte de un tercero referente a los derechos de autor sobre el artículo, folleto o libro en cuestión, EL AUTOR, asumirá la responsabilidad total, y saldrá en defensa de los derechos aquí autorizados; para todos los efectos, la Universidad Icesi actúa como un tercero de buena fe. Esta autorización, permite a la Universidad Icesi, de forma indefinida, para que en los términos establecidos en la Ley 23 de 1982, la Ley 44 de 1993, leyes y jurisprudencia vigente al respecto, haga publicación de este con fines educativos. Toda persona que consulte ya sea la biblioteca o en medio electrónico podrá copiar apartes del texto citando siempre la fuentes, es decir el título del trabajo y el autor.https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessAtribución-NoComercial-SinDerivadas 4.0 Internacional (CC BY-NC-ND 4.0)http://purl.org/coar/access_right/c_abf2ITGAMEnfermedades autoinmunesPredisposicion genéticaLupus eritematoso sistémicoCiencias socio biomédicasEvaluación genéticaMedical sciencesEvaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1Artículoinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/version/c_970fb48d4fbd8a85Comunidad Universidad Icesi – Investigadores114276280ORIGINALanaya_evaluation_genetic_2012.pdfanaya_evaluation_genetic_2012.pdfapplication/pdf519536http://repository.icesi.edu.co/biblioteca_digital/bitstream/10906/78472/1/anaya_evaluation_genetic_2012.pdf73cf28dc4a4501e03059c3b922459b30MD5110906/78472oai:repository.icesi.edu.co:10906/784722018-11-30 16:00:20.796Biblioteca Digital - Universidad icesicdcriollo@icesi.edu.co