Comparison of machine learning models for the prediction of cancer cells using MHC class I complexes

Currently, cancer is the leading cause of death worldwide, making millions of deaths annually in developing countries due to a shortage of detection and treatment. Early detection of cancer neoantigens is useful for specialists because they can help in the development of more successful treatments....

Full description

Autores:
Orjuela Canon, Alvaro David
Perdomo Charry, Oscar Julian
Tipo de recurso:
Article of investigation
Fecha de publicación:
2020
Institución:
Escuela Colombiana de Ingeniería Julio Garavito
Repositorio:
Repositorio Institucional ECI
Idioma:
eng
OAI Identifier:
oai:repositorio.escuelaing.edu.co:001/1471
Acceso en línea:
https://repositorio.escuelaing.edu.co/handle/001/1471
https://doi.org/10.1117/12.2579602
Palabra clave:
Modelos - Aprendizaje automático
Células cancerosas
Predictive analytics
Análisis predictivo
Análisis predictivo
Rights
closedAccess
License
http://purl.org/coar/access_right/c_14cb
Description
Summary:Currently, cancer is the leading cause of death worldwide, making millions of deaths annually in developing countries due to a shortage of detection and treatment. Early detection of cancer neoantigens is useful for specialists because they can help in the development of more successful treatments. Based on this problem, the objective of this work is to carry out a comparative process between machine learning models, to determine which of them allows an adequate prediction of the data, and thus determine the carcinogenic neoantigens. For this, information extracted from protein sequences was employed. The preliminary results show sensitivity and specificity of 1.0 and 0.98 respectively.