The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region

A single polymerase chain reaction (PCR) reaction targeting the spliced-leader intergenic region of Trypanosoma cruzi I was standardised by amplifying a 231 bp fragment in domestic (TcIDOM) strains or clones and 450 and 550 bp fragments in sylvatic strains or clones. This reaction was validated usin...

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Fecha de publicación:
2013
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/27076
Acceso en línea:
https://doi.org/10.1590/0074-0276130201
https://repository.urosario.edu.co/handle/10336/27076
Palabra clave:
Spliced-leader intergenic region
Trypanosoma cruzi I
PCR
Chagas disease
Domestic cycle
Sylvatic cycle
Rights
License
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spelling 970292cc-94ac-43bc-a609-3e57b565a361fe062efa-2c45-40ad-9076-805a8d1e00ac8dac3e49-50ca-4542-a539-f18b804f919c1011716118600d48532d6-520d-4ef6-a5a4-9a01adac5135496e1716-0e4a-4278-94b2-a65b8c6337d6180780cc-4c03-4eef-bdea-5f111ebe20ec3f09886f-3c2c-4bf8-8cb6-88a92b59853a019f53e5-2fb5-40c0-b075-ee5e736b53f317d71dfe-81f8-49c9-91ba-8da42ed530b645cb2300-09e4-47ba-b4a3-c3b41fbca36c818270a5-2652-499c-bcc8-7b8aa54f51762020-08-19T14:40:56Z2020-08-19T14:40:56Z2013-11A single polymerase chain reaction (PCR) reaction targeting the spliced-leader intergenic region of Trypanosoma cruzi I was standardised by amplifying a 231 bp fragment in domestic (TcIDOM) strains or clones and 450 and 550 bp fragments in sylvatic strains or clones. This reaction was validated using 44 blind coded samples and 184 non-coded T. cruzi I clones isolated from sylvatic triatomines and the correspondence between the amplified fragments and their domestic or sylvatic origin was determined. Six of the nine strains isolated from acute cases suspected of oral infection had the sylvatic T. cruzi I profile. These results confirmed that the sylvatic T. cruzi I genotype is linked to cases of oral Chagas disease in Colombia. We therefore propose the use of this novel PCR reaction in strains or clones previously characterised as T. cruzi I to distinguish TcIDOMfrom sylvatic genotypes in studies of transmission dynamics, including the verification of population selection within hosts or detection of the frequency of mixed infections by both T. cruzi I genotypes in Colombia.application/pdfhttps://doi.org/10.1590/0074-0276130201ISSN: 0074-0276EISSN: 1678-8060https://repository.urosario.edu.co/handle/10336/27076engInstituto Oswaldo Cruz935No. 7932Memorias do Instituto Oswaldo CruzVol. 108Memorias do Instituto Oswaldo Cruz, ISSN: 0074-0276;EISSN: 1678-8060, Vol.108, No.7 (Nov 2013); pp. 932-935https://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000700932&lng=en&tlng=enAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Memorias do Instituto Oswaldo Cruzinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURSpliced-leader intergenic regionTrypanosoma cruzi IPCRChagas diseaseDomestic cycleSylvatic cycleThe identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic regionLa identificación de dos genotipos de Trypanosoma cruzi I de ciclos de transmisión domésticos y silvestres en Colombia basados ??en la amplificación de una sola reacción en cadena de la polimerasa de la región intergénica del líder empalmadoarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Villa, Lina MarcelaGuhl, FelipeZabala, DanielRamírez, Juan DavidUrrea, Daniel AlfonsoHernández, Diana CarolinaCucunubá, ZulmaMontilla, MarlenyCarranza, Julio CésarRueda, KarinaTrujillo, Jorge EduardoVallejo, Gustavo AdolfoORIGINAL0074-0276-mioc-108-07-00932.pdfapplication/pdf368966https://repository.urosario.edu.co/bitstreams/ee929892-098e-4d4f-acdb-a9dcb42aff3b/downloadfa010cc5210448c303d7e35407f794fbMD51TEXT0074-0276-mioc-108-07-00932.pdf.txt0074-0276-mioc-108-07-00932.pdf.txtExtracted texttext/plain21460https://repository.urosario.edu.co/bitstreams/a41de1a8-fc9e-4aba-8427-f3120cb7cd46/download6b2063aaf0be71d3b90e1ee72fffa0beMD52THUMBNAIL0074-0276-mioc-108-07-00932.pdf.jpg0074-0276-mioc-108-07-00932.pdf.jpgGenerated Thumbnailimage/jpeg4870https://repository.urosario.edu.co/bitstreams/badc26dc-caa5-4966-a14a-90f2aabc38cc/download488a6048d7caeaeb799f7713d709d94aMD5310336/27076oai:repository.urosario.edu.co:10336/270762021-10-05 07:01:20.0https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
dc.title.TranslatedTitle.spa.fl_str_mv La identificación de dos genotipos de Trypanosoma cruzi I de ciclos de transmisión domésticos y silvestres en Colombia basados ??en la amplificación de una sola reacción en cadena de la polimerasa de la región intergénica del líder empalmado
title The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
spellingShingle The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
Spliced-leader intergenic region
Trypanosoma cruzi I
PCR
Chagas disease
Domestic cycle
Sylvatic cycle
title_short The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
title_full The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
title_fullStr The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
title_full_unstemmed The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
title_sort The identification of two Trypanosoma cruzi I genotypes from domestic and sylvatic transmission cycles in Colombia based on a single polymerase chain reaction amplification of the spliced-leader intergenic region
dc.subject.keyword.spa.fl_str_mv Spliced-leader intergenic region
Trypanosoma cruzi I
PCR
Chagas disease
Domestic cycle
Sylvatic cycle
topic Spliced-leader intergenic region
Trypanosoma cruzi I
PCR
Chagas disease
Domestic cycle
Sylvatic cycle
description A single polymerase chain reaction (PCR) reaction targeting the spliced-leader intergenic region of Trypanosoma cruzi I was standardised by amplifying a 231 bp fragment in domestic (TcIDOM) strains or clones and 450 and 550 bp fragments in sylvatic strains or clones. This reaction was validated using 44 blind coded samples and 184 non-coded T. cruzi I clones isolated from sylvatic triatomines and the correspondence between the amplified fragments and their domestic or sylvatic origin was determined. Six of the nine strains isolated from acute cases suspected of oral infection had the sylvatic T. cruzi I profile. These results confirmed that the sylvatic T. cruzi I genotype is linked to cases of oral Chagas disease in Colombia. We therefore propose the use of this novel PCR reaction in strains or clones previously characterised as T. cruzi I to distinguish TcIDOMfrom sylvatic genotypes in studies of transmission dynamics, including the verification of population selection within hosts or detection of the frequency of mixed infections by both T. cruzi I genotypes in Colombia.
publishDate 2013
dc.date.created.spa.fl_str_mv 2013-11
dc.date.accessioned.none.fl_str_mv 2020-08-19T14:40:56Z
dc.date.available.none.fl_str_mv 2020-08-19T14:40:56Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1590/0074-0276130201
dc.identifier.issn.none.fl_str_mv ISSN: 0074-0276
EISSN: 1678-8060
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/27076
url https://doi.org/10.1590/0074-0276130201
https://repository.urosario.edu.co/handle/10336/27076
identifier_str_mv ISSN: 0074-0276
EISSN: 1678-8060
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 935
dc.relation.citationIssue.none.fl_str_mv No. 7
dc.relation.citationStartPage.none.fl_str_mv 932
dc.relation.citationTitle.none.fl_str_mv Memorias do Instituto Oswaldo Cruz
dc.relation.citationVolume.none.fl_str_mv Vol. 108
dc.relation.ispartof.spa.fl_str_mv Memorias do Instituto Oswaldo Cruz, ISSN: 0074-0276;EISSN: 1678-8060, Vol.108, No.7 (Nov 2013); pp. 932-935
dc.relation.uri.spa.fl_str_mv https://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000700932&lng=en&tlng=en
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rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Instituto Oswaldo Cruz
dc.source.spa.fl_str_mv Memorias do Instituto Oswaldo Cruz
institution Universidad del Rosario
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dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
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