A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions

Rosuvastatin, is a widely-used statin for the treatment of hypercholesterolemia and the prevention of cardiovascular diseases. Although rosuvastatin is well tolerated, about 3/10.000 patients can suffer severe myopathy. Rhabdomyolysis is a severe medical condition that causes injury to the skeletal...

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Autores:
Tipo de recurso:
Fecha de publicación:
2020
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/22797
Acceso en línea:
https://doi.org/10.2147/PGPM.S228709
https://repository.urosario.edu.co/handle/10336/22797
Palabra clave:
Acetylsalicylic acid
Aminotransferase
Antihyperkalemic agent
Carvedilol
Creatine kinase
Creatinine
Cytochrome p450 2c19
Ezetimibe
Insulin detemir
Linagliptin
Losartan
Obscurin
Rosuvastatin
Ticagrelor
Abdominal distension
Abdominal pain
Abnormal urine composition
Aged
Article
Case report
Chronic kidney failure
Clinical article
Congestive cardiomyopathy
Coronary artery disease
Cyp2c19 gene
Dark urine
Dehydration
Drug induced disease
Drug metabolism
Drug safety
Electromyography
Emergency ward
Eyelid edema
Female
Gene
Gene frequency
Genetic association
Genetic variability
Heart left ventricle ejection fraction
Heart muscle revascularization
Hemodialysis
Hospital admission
Hospital discharge
Human
Human tissue
Hyperkalemia
Hyperphosphatemia
Hypertension
Hypocalcemia
Hyponatremia
Hypotension
Intervention study
Leukocytosis
Limb pain
Metabolic acidosis
Muscle biopsy
Myoglobinuria
Non insulin dependent diabetes mellitus
Npc1l1 gene
Obscn gene
Pharmacogenomics
Phase 1 clinical trial
Physical examination
Polymerase chain reaction
Pyelonephritis
Rhabdomyolysis
Rosuvastatin induced rhabdomyolysis
Scoring system
Tachycardia
Urea nitrogen blood level
Urinalysis
Whole exome sequencing
Adverse drug reaction
Pharmacogenomics
Polymorphisms
Rhabdomyolysis
Rosuvastatin
Whole-exome sequencing
Rights
License
Abierto (Texto Completo)
id EDOCUR2_f6752fdc9a2003b5ddf4192bf7266e7c
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network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
dc.title.spa.fl_str_mv A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
title A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
spellingShingle A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
Acetylsalicylic acid
Aminotransferase
Antihyperkalemic agent
Carvedilol
Creatine kinase
Creatinine
Cytochrome p450 2c19
Ezetimibe
Insulin detemir
Linagliptin
Losartan
Obscurin
Rosuvastatin
Ticagrelor
Abdominal distension
Abdominal pain
Abnormal urine composition
Aged
Article
Case report
Chronic kidney failure
Clinical article
Congestive cardiomyopathy
Coronary artery disease
Cyp2c19 gene
Dark urine
Dehydration
Drug induced disease
Drug metabolism
Drug safety
Electromyography
Emergency ward
Eyelid edema
Female
Gene
Gene frequency
Genetic association
Genetic variability
Heart left ventricle ejection fraction
Heart muscle revascularization
Hemodialysis
Hospital admission
Hospital discharge
Human
Human tissue
Hyperkalemia
Hyperphosphatemia
Hypertension
Hypocalcemia
Hyponatremia
Hypotension
Intervention study
Leukocytosis
Limb pain
Metabolic acidosis
Muscle biopsy
Myoglobinuria
Non insulin dependent diabetes mellitus
Npc1l1 gene
Obscn gene
Pharmacogenomics
Phase 1 clinical trial
Physical examination
Polymerase chain reaction
Pyelonephritis
Rhabdomyolysis
Rosuvastatin induced rhabdomyolysis
Scoring system
Tachycardia
Urea nitrogen blood level
Urinalysis
Whole exome sequencing
Adverse drug reaction
Pharmacogenomics
Polymorphisms
Rhabdomyolysis
Rosuvastatin
Whole-exome sequencing
title_short A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
title_full A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
title_fullStr A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
title_full_unstemmed A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
title_sort A pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactions
dc.subject.keyword.spa.fl_str_mv Acetylsalicylic acid
Aminotransferase
Antihyperkalemic agent
Carvedilol
Creatine kinase
Creatinine
Cytochrome p450 2c19
Ezetimibe
Insulin detemir
Linagliptin
Losartan
Obscurin
Rosuvastatin
Ticagrelor
Abdominal distension
Abdominal pain
Abnormal urine composition
Aged
Article
Case report
Chronic kidney failure
Clinical article
Congestive cardiomyopathy
Coronary artery disease
Cyp2c19 gene
Dark urine
Dehydration
Drug induced disease
Drug metabolism
Drug safety
Electromyography
Emergency ward
Eyelid edema
Female
Gene
Gene frequency
Genetic association
Genetic variability
Heart left ventricle ejection fraction
Heart muscle revascularization
Hemodialysis
Hospital admission
Hospital discharge
Human
Human tissue
Hyperkalemia
Hyperphosphatemia
Hypertension
Hypocalcemia
Hyponatremia
Hypotension
Intervention study
Leukocytosis
Limb pain
Metabolic acidosis
Muscle biopsy
Myoglobinuria
Non insulin dependent diabetes mellitus
Npc1l1 gene
Obscn gene
Pharmacogenomics
Phase 1 clinical trial
Physical examination
Polymerase chain reaction
Pyelonephritis
Rhabdomyolysis
Rosuvastatin induced rhabdomyolysis
Scoring system
Tachycardia
Urea nitrogen blood level
Urinalysis
Whole exome sequencing
Adverse drug reaction
Pharmacogenomics
Polymorphisms
Rhabdomyolysis
Rosuvastatin
Whole-exome sequencing
topic Acetylsalicylic acid
Aminotransferase
Antihyperkalemic agent
Carvedilol
Creatine kinase
Creatinine
Cytochrome p450 2c19
Ezetimibe
Insulin detemir
Linagliptin
Losartan
Obscurin
Rosuvastatin
Ticagrelor
Abdominal distension
Abdominal pain
Abnormal urine composition
Aged
Article
Case report
Chronic kidney failure
Clinical article
Congestive cardiomyopathy
Coronary artery disease
Cyp2c19 gene
Dark urine
Dehydration
Drug induced disease
Drug metabolism
Drug safety
Electromyography
Emergency ward
Eyelid edema
Female
Gene
Gene frequency
Genetic association
Genetic variability
Heart left ventricle ejection fraction
Heart muscle revascularization
Hemodialysis
Hospital admission
Hospital discharge
Human
Human tissue
Hyperkalemia
Hyperphosphatemia
Hypertension
Hypocalcemia
Hyponatremia
Hypotension
Intervention study
Leukocytosis
Limb pain
Metabolic acidosis
Muscle biopsy
Myoglobinuria
Non insulin dependent diabetes mellitus
Npc1l1 gene
Obscn gene
Pharmacogenomics
Phase 1 clinical trial
Physical examination
Polymerase chain reaction
Pyelonephritis
Rhabdomyolysis
Rosuvastatin induced rhabdomyolysis
Scoring system
Tachycardia
Urea nitrogen blood level
Urinalysis
Whole exome sequencing
Adverse drug reaction
Pharmacogenomics
Polymorphisms
Rhabdomyolysis
Rosuvastatin
Whole-exome sequencing
description Rosuvastatin, is a widely-used statin for the treatment of hypercholesterolemia and the prevention of cardiovascular diseases. Although rosuvastatin is well tolerated, about 3/10.000 patients can suffer severe myopathy. Rhabdomyolysis is a severe medical condition that causes injury to the skeletal muscle, electrolyte imbalances, acute renal failure and extreme creatine kinase (CK) elevation. Little is known regarding the molecular involvement of rosuvastatin-induced rhabdomyolysis (RIR). It has been demonstrated that genomic variants associated with decreased enzymatic activity of proteins are important determinants in plasmatic and skeletal muscle distribution of rosuvastatin and its toxicity. Until now, no interactions of ticagrelor, ezetimibe and rosuvastatin have been described with the consideration of pharmacogenomics predisposition. The present report involves a whole-exome sequencing (WES), in a patient affected by rosuvastatin-induced rhabdomyolysis. A pharmacogenomic dissection was performed by analyzing a comprehensive subset of candidate genes (n=160) potentially related to RIR. The genes were selected according to their implication in drug metabolism or inherited myopathies. Using an innovative approach of bioinformatics analysis, considering rare and common variants, we identified 19 genomic variations potentially related to the pharmacokinetic/pharmacodynamic modifications of rosuvastatin, ezetimibe and ticagrelor. The affected genes are involved in Phase I metabolism (CYP2C19, CYP2E1, CYP1A1, CYP2D6 and CYP2C9), Phase II metabolism (UGT2B15 and UGT2B7), influx transportation (SLCO1B3 and SLCO2B1), efflux transportation (ABCG8, ABCB11, ABCC4 and ABCB1), drug targeting (NPC1L1) and inherited myopathy etiology (OBSCN). We report three rare, potentially pathogenic molecular variants in CYP2C19, NPC1L1 and OBSCN genes. Pharmacogenetic analysis indicated that the patient was a carrier of inactivating alleles in several pharmacogenes involved in drug toxicity. The whole-exome sequencing and bioinformatics analysis presented here represents an innovative way to identify genomic variants contributing with RIR´s origin and evokes the polygenic nature of adverse drug reactions. © 2020 Calderon-Ospina et al.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2020-05-25T23:58:05Z
dc.date.available.none.fl_str_mv 2020-05-25T23:58:05Z
dc.date.created.spa.fl_str_mv 2020
dc.type.eng.fl_str_mv article
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dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.2147/PGPM.S228709
dc.identifier.issn.none.fl_str_mv 11787066
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/22797
url https://doi.org/10.2147/PGPM.S228709
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identifier_str_mv 11787066
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 70
dc.relation.citationStartPage.none.fl_str_mv 59
dc.relation.citationTitle.none.fl_str_mv Pharmacogenomics and Personalized Medicine
dc.relation.citationVolume.none.fl_str_mv Vol. 13
dc.relation.ispartof.spa.fl_str_mv Pharmacogenomics and Personalized Medicine, ISSN:11787066, Vol.13,(2020); pp. 59-70
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institution Universidad del Rosario
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spelling 79733068600520948256007db276b7-c8b2-4e5a-bcb1-e549159758f7-198e94689-177f-4c7c-a35f-a8b2326bf1d1-150189dba-7d98-407e-b661-fe9990ec7038-1cb31668b-82b5-452a-ac1f-36cbc8efaeb0-179782770-12020-05-25T23:58:05Z2020-05-25T23:58:05Z2020Rosuvastatin, is a widely-used statin for the treatment of hypercholesterolemia and the prevention of cardiovascular diseases. Although rosuvastatin is well tolerated, about 3/10.000 patients can suffer severe myopathy. Rhabdomyolysis is a severe medical condition that causes injury to the skeletal muscle, electrolyte imbalances, acute renal failure and extreme creatine kinase (CK) elevation. Little is known regarding the molecular involvement of rosuvastatin-induced rhabdomyolysis (RIR). It has been demonstrated that genomic variants associated with decreased enzymatic activity of proteins are important determinants in plasmatic and skeletal muscle distribution of rosuvastatin and its toxicity. Until now, no interactions of ticagrelor, ezetimibe and rosuvastatin have been described with the consideration of pharmacogenomics predisposition. The present report involves a whole-exome sequencing (WES), in a patient affected by rosuvastatin-induced rhabdomyolysis. A pharmacogenomic dissection was performed by analyzing a comprehensive subset of candidate genes (n=160) potentially related to RIR. The genes were selected according to their implication in drug metabolism or inherited myopathies. Using an innovative approach of bioinformatics analysis, considering rare and common variants, we identified 19 genomic variations potentially related to the pharmacokinetic/pharmacodynamic modifications of rosuvastatin, ezetimibe and ticagrelor. The affected genes are involved in Phase I metabolism (CYP2C19, CYP2E1, CYP1A1, CYP2D6 and CYP2C9), Phase II metabolism (UGT2B15 and UGT2B7), influx transportation (SLCO1B3 and SLCO2B1), efflux transportation (ABCG8, ABCB11, ABCC4 and ABCB1), drug targeting (NPC1L1) and inherited myopathy etiology (OBSCN). We report three rare, potentially pathogenic molecular variants in CYP2C19, NPC1L1 and OBSCN genes. Pharmacogenetic analysis indicated that the patient was a carrier of inactivating alleles in several pharmacogenes involved in drug toxicity. The whole-exome sequencing and bioinformatics analysis presented here represents an innovative way to identify genomic variants contributing with RIR´s origin and evokes the polygenic nature of adverse drug reactions. © 2020 Calderon-Ospina et al.application/pdfhttps://doi.org/10.2147/PGPM.S22870911787066https://repository.urosario.edu.co/handle/10336/22797engDove Medical Press Ltd7059Pharmacogenomics and Personalized MedicineVol. 13Pharmacogenomics and Personalized Medicine, ISSN:11787066, Vol.13,(2020); pp. 59-70https://www.scopus.com/inward/record.uri?eid=2-s2.0-85081276202&doi=10.2147%2fPGPM.S228709&partnerID=40&md5=a1e89ca7a34173b8dd92e9d66cb1983fAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURAcetylsalicylic acidAminotransferaseAntihyperkalemic agentCarvedilolCreatine kinaseCreatinineCytochrome p450 2c19EzetimibeInsulin detemirLinagliptinLosartanObscurinRosuvastatinTicagrelorAbdominal distensionAbdominal painAbnormal urine compositionAgedArticleCase reportChronic kidney failureClinical articleCongestive cardiomyopathyCoronary artery diseaseCyp2c19 geneDark urineDehydrationDrug induced diseaseDrug metabolismDrug safetyElectromyographyEmergency wardEyelid edemaFemaleGeneGene frequencyGenetic associationGenetic variabilityHeart left ventricle ejection fractionHeart muscle revascularizationHemodialysisHospital admissionHospital dischargeHumanHuman tissueHyperkalemiaHyperphosphatemiaHypertensionHypocalcemiaHyponatremiaHypotensionIntervention studyLeukocytosisLimb painMetabolic acidosisMuscle biopsyMyoglobinuriaNon insulin dependent diabetes mellitusNpc1l1 geneObscn genePharmacogenomicsPhase 1 clinical trialPhysical examinationPolymerase chain reactionPyelonephritisRhabdomyolysisRosuvastatin induced rhabdomyolysisScoring systemTachycardiaUrea nitrogen blood levelUrinalysisWhole exome sequencingAdverse drug reactionPharmacogenomicsPolymorphismsRhabdomyolysisRosuvastatinWhole-exome sequencingA pharmacogenomic dissection of a Rosuvastatin-induced rhabdomyolysis case evokes the polygenic nature of adverse drug reactionsarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Calderón Ospina, Carlos AlbertoFonseca Mendoza, Dora JanethHernández-Sómerson, MarioGarcía, Ana MaríaMejia, AdrianaTamayo-Agudelo, CarollLaissue, PaulORIGINALpgpm-228709-a-pharmacogenomic-dissection-of-a-rhabdmyolysis-induced-rosu.pdfapplication/pdf3973267https://repository.urosario.edu.co/bitstreams/2cda7735-686b-40b6-81ba-d7dc5fc00f08/download9691b5b390edc322b0ccec6a37c18288MD51TEXTpgpm-228709-a-pharmacogenomic-dissection-of-a-rhabdmyolysis-induced-rosu.pdf.txtpgpm-228709-a-pharmacogenomic-dissection-of-a-rhabdmyolysis-induced-rosu.pdf.txtExtracted texttext/plain52127https://repository.urosario.edu.co/bitstreams/8bba5c45-e3e7-4278-afce-90cfea52b98b/downloade4412402f35aca7e824aca1547073e76MD52THUMBNAILpgpm-228709-a-pharmacogenomic-dissection-of-a-rhabdmyolysis-induced-rosu.pdf.jpgpgpm-228709-a-pharmacogenomic-dissection-of-a-rhabdmyolysis-induced-rosu.pdf.jpgGenerated Thumbnailimage/jpeg4468https://repository.urosario.edu.co/bitstreams/defbb7e8-70e9-4957-be2f-ec41e2eebd7f/downloadf896ce92f1bc05da555d6e3ea624e070MD5310336/22797oai:repository.urosario.edu.co:10336/227972022-05-02 07:37:20.598233https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co