A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime

The C–X bond cleavage in different methyl halides (CH3X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (CoIICbx) was theoretically investigated in the present work. An SN2-like mechanism was considered to simulate the chemical process where the cobalt atom ac...

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Fecha de publicación:
2023
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/42102
Acceso en línea:
https://doi.org/10.3390/molecules27217283
https://repository.urosario.edu.co/handle/10336/42102
Palabra clave:
Reaction force
atoms in molecules
source function
cobaloxime
carbon–halogen cleavage
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repository_id_str
spelling c6ce8769-b3a2-497a-967c-10427c17c73b5574323f-1951-49ab-804c-0a63a4d508c691a0d99f-91c1-42a8-8dfe-4209e3b7889752352c99-2255-42e9-a015-41eedf78c3dfa01542e5-2327-467d-91ac-be9f0575e7dd20b88eb1-cf4b-46e9-8e09-89d8037f4b102024-01-31T18:22:23Z2024-01-31T18:22:23Z2023-10-262023The C–X bond cleavage in different methyl halides (CH3X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (CoIICbx) was theoretically investigated in the present work. An SN2-like mechanism was considered to simulate the chemical process where the cobalt atom acts as the nucleophile and the halogen as the leaving group. The reaction path was computed by means of the intrinsic reaction coordinate method and analyzed in detail through the reaction force formalism, the quantum theory of atoms in molecules (QTAIM), and the calculation of one-electron density derived quantities, such as the source function (SF) and the spin density. A thorough comparison of the results with those obtained in the same reaction occurring in presence of 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(I) (CoICbx) was conducted to reveal the main differences between the two cases. The reactions mediated by CoIICbx were observed to be endothermic and possess higher activation energies in contrast to the reactions where the CoICbx complex is present. The latter was supported by the reaction force results, which suggest a relationship between the activation energy and the ionization potentials of the different nucleophiles present in the cleavage reaction. Moreover, the SF results indicates that the lower axial ligand (i.e., 5,6-dimethylbenzimidazole) exclusively participates on the first stage of the reaction mediated by the CoIICbx complex, while for the CoICbx case, it appears to have an important role along the whole process. Finally, the QTAIM charge analysis indicates that oxidation of the cobalt atom occurs in both cases; at the same time, it suggests the formation of an uncommon two-center one-electron bond in the CoIICbx case. The latter was confirmed by means of electron localization calculations, which resulted in a larger electron count at the Co–C interatomic region for the CoICbx case upon comparison with its CoIICbx counterpart.application/pdfhttps://doi.org/10.3390/molecules272172831420-3049https://repository.urosario.edu.co/handle/10336/42102engUniversidad del Rosariohttps://pubmed.ncbi.nlm.nih.gov/36364105/Attribution-NonCommercial-ShareAlike 4.0 InternationalAbierto (Texto Completo)https://creativecommons.org/licenses/by/4.0/http://purl.org/coar/access_right/c_abf2Moleculesinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURReaction forceatoms in moleculessource functioncobaloximecarbon–halogen cleavageA Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)AloximearticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Seijas, Luis E.Zambrano, Cesar H.Rodríguez, VladimirAlí-Torres, JorgeRincón, LuisTorres, F. JavierORIGINALA Theoretical Study.pdfapplication/pdf3359630https://repository.urosario.edu.co/bitstreams/bf3cf9a1-4f57-4fa9-87c6-105736757ad9/download0852f8302e3401b17e9b4c8ec8a18271MD51TEXTA Theoretical Study.pdf.txtA Theoretical Study.pdf.txtExtracted texttext/plain81095https://repository.urosario.edu.co/bitstreams/a15c8c0c-928b-482e-a7c5-cc104bee26b1/downloadc0de30b83e34f937b1ddd8fd07f51d43MD52THUMBNAILA Theoretical Study.pdf.jpgA Theoretical Study.pdf.jpgGenerated Thumbnailimage/jpeg4874https://repository.urosario.edu.co/bitstreams/8ee3be7d-5c43-4698-a8b9-dc3ad92ec888/download3f91fa9836dbe6fb2ae0c8132d224721MD5310336/42102oai:repository.urosario.edu.co:10336/421022024-02-01 03:01:03.145https://creativecommons.org/licenses/by/4.0/Attribution-NonCommercial-ShareAlike 4.0 Internationalhttps://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
spellingShingle A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
Reaction force
atoms in molecules
source function
cobaloxime
carbon–halogen cleavage
title_short A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_full A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_fullStr A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_full_unstemmed A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_sort A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
dc.subject.spa.fl_str_mv Reaction force
atoms in molecules
source function
cobaloxime
carbon–halogen cleavage
topic Reaction force
atoms in molecules
source function
cobaloxime
carbon–halogen cleavage
description The C–X bond cleavage in different methyl halides (CH3X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (CoIICbx) was theoretically investigated in the present work. An SN2-like mechanism was considered to simulate the chemical process where the cobalt atom acts as the nucleophile and the halogen as the leaving group. The reaction path was computed by means of the intrinsic reaction coordinate method and analyzed in detail through the reaction force formalism, the quantum theory of atoms in molecules (QTAIM), and the calculation of one-electron density derived quantities, such as the source function (SF) and the spin density. A thorough comparison of the results with those obtained in the same reaction occurring in presence of 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(I) (CoICbx) was conducted to reveal the main differences between the two cases. The reactions mediated by CoIICbx were observed to be endothermic and possess higher activation energies in contrast to the reactions where the CoICbx complex is present. The latter was supported by the reaction force results, which suggest a relationship between the activation energy and the ionization potentials of the different nucleophiles present in the cleavage reaction. Moreover, the SF results indicates that the lower axial ligand (i.e., 5,6-dimethylbenzimidazole) exclusively participates on the first stage of the reaction mediated by the CoIICbx complex, while for the CoICbx case, it appears to have an important role along the whole process. Finally, the QTAIM charge analysis indicates that oxidation of the cobalt atom occurs in both cases; at the same time, it suggests the formation of an uncommon two-center one-electron bond in the CoIICbx case. The latter was confirmed by means of electron localization calculations, which resulted in a larger electron count at the Co–C interatomic region for the CoICbx case upon comparison with its CoIICbx counterpart.
publishDate 2023
dc.date.created.spa.fl_str_mv 2023-10-26
dc.date.issued.spa.fl_str_mv 2023
dc.date.accessioned.none.fl_str_mv 2024-01-31T18:22:23Z
dc.date.available.none.fl_str_mv 2024-01-31T18:22:23Z
dc.type.spa.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.spa.fl_str_mv https://doi.org/10.3390/molecules27217283
dc.identifier.issn.spa.fl_str_mv 1420-3049
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/42102
url https://doi.org/10.3390/molecules27217283
https://repository.urosario.edu.co/handle/10336/42102
identifier_str_mv 1420-3049
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.uri.spa.fl_str_mv https://pubmed.ncbi.nlm.nih.gov/36364105/
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dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
rights_invalid_str_mv Attribution-NonCommercial-ShareAlike 4.0 International
Abierto (Texto Completo)
https://creativecommons.org/licenses/by/4.0/
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad del Rosario
dc.source.spa.fl_str_mv Molecules
institution Universidad del Rosario
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dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
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