PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia

Background: Cystic fibrosis (CF) is the most frequent autosomal recessive disorder in the Caucasian population with an incidence of 1 in 2,500 newborns. More than 1,300 mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene that causes CF have been described. However, mutat...

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Fecha de publicación:
2006
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/23713
Acceso en línea:
https://repository.urosario.edu.co/handle/10336/23713
Palabra clave:
Transmembrane conductance regulator
Article
Blood sampling
Colombia
Controlled study
Cost effectiveness analysis
Cystic fibrosis
Diagnostic accuracy
Diagnostic value
Disease association
Disease carrier
Early diagnosis
Gene mutation
Genetic counseling
Genetic screening
Genetic susceptibility
Heteroduplex analysis
Heterozygote
Human
Incidence
Major clinical study
Morbidity
Mortality
Polymerase chain reaction
Reliability
Reproducibility
Risk reduction
Screening test
Sensitivity and specificity
Cftr
Colombia
Cystic fibrosis
Genetic screening
Heteroduplex analysis
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id EDOCUR2_e225b55447397d1776b7aecc6f10bee0
oai_identifier_str oai:repository.urosario.edu.co:10336/23713
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
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spelling 9caf113a-af82-4f49-955c-bd857e601d221c0cc46b-fb53-42ee-a06e-e0133b0b50b35209482560019331819600ccf978b4-175b-4e34-b92b-59af9dbfc8872020-05-26T00:04:44Z2020-05-26T00:04:44Z2006Background: Cystic fibrosis (CF) is the most frequent autosomal recessive disorder in the Caucasian population with an incidence of 1 in 2,500 newborns. More than 1,300 mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene that causes CF have been described. However, mutation F508del is the most common mutation in different populations around the world. Objective: To develop a fast, reliable and low-cost technique to screen carriers and affected individuals for the F508del mutation. This kind of analysis will have an impact on genetic counselling to decrease the incidence of new cases, in the early diagnosis and instauration of appropriate treatment to decrease morbidity and mortality associated to CF in Colombia. Methods: The reliability of the PCR-heteroduplex by grouping technique by analysis of 400 blood spot samples from asymptomatic CF patients was defined. Results: Using PCR-heteroduplex by grouping technique 100% efficiency, reproducibility and specificity and 92%sensitivity were found. Conclusions: The sensitivity and reproducibility of the PCR-heteroduplex by grouping technique up to pooling of 10 samples were demonstrated. This kind of analysis could be used in heterozygotes and affected screening programs. © 2006 Corporación Editora Médica del Valle.application/pdf1657953401208322https://repository.urosario.edu.co/handle/10336/23713eng182No. 3176Colombia MedicaVol. 37Colombia Medica, ISSN:16579534, 01208322, Vol.37, No.3 (2006); pp. 176-182https://www.scopus.com/inward/record.uri?eid=2-s2.0-33748667315&partnerID=40&md5=76621b702bca8bfbd0cabb90b3799429Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURTransmembrane conductance regulatorArticleBlood samplingColombiaControlled studyCost effectiveness analysisCystic fibrosisDiagnostic accuracyDiagnostic valueDisease associationDisease carrierEarly diagnosisGene mutationGenetic counselingGenetic screeningGenetic susceptibilityHeteroduplex analysisHeterozygoteHumanIncidenceMajor clinical studyMorbidityMortalityPolymerase chain reactionReliabilityReproducibilityRisk reductionScreening testSensitivity and specificityCftrColombiaCystic fibrosisGenetic screeningHeteroduplex analysisPCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in ColombiaPCR-heterodúplex por agrupamiento: Implementación de un método de identificación de portadores de la mutación más común causal de fibrosis quística en ColombiaarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Jay L.M.Mateus H.Fonseca Mendoza, Dora JanethRestrepo Fernández, Carlos MartínKeyeux G.ORIGINAL442-Manuscript-1327-1-10-20091120.pdfapplication/pdf71531https://repository.urosario.edu.co/bitstreams/45bd9980-48af-49f6-8347-cdc65b5bc2fd/download44aeecd0abea03626b53316fecae2ed3MD51TEXT442-Manuscript-1327-1-10-20091120.pdf.txt442-Manuscript-1327-1-10-20091120.pdf.txtExtracted texttext/plain29994https://repository.urosario.edu.co/bitstreams/97a82309-711b-4610-ad8a-faadafc30e2a/download6047ed90a4dec4d342ce373c045d2a51MD52THUMBNAIL442-Manuscript-1327-1-10-20091120.pdf.jpg442-Manuscript-1327-1-10-20091120.pdf.jpgGenerated Thumbnailimage/jpeg4203https://repository.urosario.edu.co/bitstreams/e9ab9f9c-7e46-466d-a254-8bf095765b80/download6ad543ce44190bbd41dc75fc5333555aMD5310336/23713oai:repository.urosario.edu.co:10336/237132022-05-02 07:37:16.640014https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
dc.title.TranslatedTitle.spa.fl_str_mv PCR-heterodúplex por agrupamiento: Implementación de un método de identificación de portadores de la mutación más común causal de fibrosis quística en Colombia
title PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
spellingShingle PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
Transmembrane conductance regulator
Article
Blood sampling
Colombia
Controlled study
Cost effectiveness analysis
Cystic fibrosis
Diagnostic accuracy
Diagnostic value
Disease association
Disease carrier
Early diagnosis
Gene mutation
Genetic counseling
Genetic screening
Genetic susceptibility
Heteroduplex analysis
Heterozygote
Human
Incidence
Major clinical study
Morbidity
Mortality
Polymerase chain reaction
Reliability
Reproducibility
Risk reduction
Screening test
Sensitivity and specificity
Cftr
Colombia
Cystic fibrosis
Genetic screening
Heteroduplex analysis
title_short PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
title_full PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
title_fullStr PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
title_full_unstemmed PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
title_sort PCR-heteroduplex by grouping: Rapid screening carrier method for cystic fibrosis F508del mutation in Colombia
dc.subject.keyword.spa.fl_str_mv Transmembrane conductance regulator
Article
Blood sampling
Colombia
Controlled study
Cost effectiveness analysis
Cystic fibrosis
Diagnostic accuracy
Diagnostic value
Disease association
Disease carrier
Early diagnosis
Gene mutation
Genetic counseling
Genetic screening
Genetic susceptibility
Heteroduplex analysis
Heterozygote
Human
Incidence
Major clinical study
Morbidity
Mortality
Polymerase chain reaction
Reliability
Reproducibility
Risk reduction
Screening test
Sensitivity and specificity
Cftr
Colombia
Cystic fibrosis
Genetic screening
Heteroduplex analysis
topic Transmembrane conductance regulator
Article
Blood sampling
Colombia
Controlled study
Cost effectiveness analysis
Cystic fibrosis
Diagnostic accuracy
Diagnostic value
Disease association
Disease carrier
Early diagnosis
Gene mutation
Genetic counseling
Genetic screening
Genetic susceptibility
Heteroduplex analysis
Heterozygote
Human
Incidence
Major clinical study
Morbidity
Mortality
Polymerase chain reaction
Reliability
Reproducibility
Risk reduction
Screening test
Sensitivity and specificity
Cftr
Colombia
Cystic fibrosis
Genetic screening
Heteroduplex analysis
description Background: Cystic fibrosis (CF) is the most frequent autosomal recessive disorder in the Caucasian population with an incidence of 1 in 2,500 newborns. More than 1,300 mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene that causes CF have been described. However, mutation F508del is the most common mutation in different populations around the world. Objective: To develop a fast, reliable and low-cost technique to screen carriers and affected individuals for the F508del mutation. This kind of analysis will have an impact on genetic counselling to decrease the incidence of new cases, in the early diagnosis and instauration of appropriate treatment to decrease morbidity and mortality associated to CF in Colombia. Methods: The reliability of the PCR-heteroduplex by grouping technique by analysis of 400 blood spot samples from asymptomatic CF patients was defined. Results: Using PCR-heteroduplex by grouping technique 100% efficiency, reproducibility and specificity and 92%sensitivity were found. Conclusions: The sensitivity and reproducibility of the PCR-heteroduplex by grouping technique up to pooling of 10 samples were demonstrated. This kind of analysis could be used in heterozygotes and affected screening programs. © 2006 Corporación Editora Médica del Valle.
publishDate 2006
dc.date.created.spa.fl_str_mv 2006
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:04:44Z
dc.date.available.none.fl_str_mv 2020-05-26T00:04:44Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
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dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.issn.none.fl_str_mv 16579534
01208322
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/23713
identifier_str_mv 16579534
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url https://repository.urosario.edu.co/handle/10336/23713
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 182
dc.relation.citationIssue.none.fl_str_mv No. 3
dc.relation.citationStartPage.none.fl_str_mv 176
dc.relation.citationTitle.none.fl_str_mv Colombia Medica
dc.relation.citationVolume.none.fl_str_mv Vol. 37
dc.relation.ispartof.spa.fl_str_mv Colombia Medica, ISSN:16579534, 01208322, Vol.37, No.3 (2006); pp. 176-182
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