Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda
Background: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA genomes with significant biotechnological applications such as biological pest control, recombinant protein production, gene delivery in mammals and as a model of DNA genome evolution. These pathogen...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2015
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/19203
- Acceso en línea:
- http://repository.urosario.edu.co/handle/10336/19203
- Palabra clave:
- insecticide
messenger RNA
phosphatase
polypeptide
Alphabaculovirus
animal cell
Baculoviridae
bioinformatics
cell transport
DNA repair
DNA virus infection
Microbiología
Article
controlled study
Virus
Microorganismos recombinantes
- Rights
- License
- Abierto (Texto Completo)
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Repositorio EdocUR - U. Rosario |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
title |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
spellingShingle |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda insecticide messenger RNA phosphatase polypeptide Alphabaculovirus animal cell Baculoviridae bioinformatics cell transport DNA repair DNA virus infection Microbiología Article controlled study Virus Microorganismos recombinantes |
title_short |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
title_full |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
title_fullStr |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
title_full_unstemmed |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
title_sort |
Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda |
dc.subject.spa.fl_str_mv |
insecticide messenger RNA phosphatase polypeptide Alphabaculovirus animal cell Baculoviridae bioinformatics cell transport DNA repair DNA virus infection |
topic |
insecticide messenger RNA phosphatase polypeptide Alphabaculovirus animal cell Baculoviridae bioinformatics cell transport DNA repair DNA virus infection Microbiología Article controlled study Virus Microorganismos recombinantes |
dc.subject.ddc.spa.fl_str_mv |
Microbiología |
dc.subject.keyword.spa.fl_str_mv |
Article controlled study |
dc.subject.lemb.spa.fl_str_mv |
Virus Microorganismos recombinantes |
description |
Background: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA genomes with significant biotechnological applications such as biological pest control, recombinant protein production, gene delivery in mammals and as a model of DNA genome evolution. These pathogens infect insects from the orders Lepidoptera, Hymenoptera and Diptera, and have high species diversity which is expressed in their diverse biological properties including morphology, virulence or pathogenicity. Spodoptera frugiperda (Lepidoptera: Noctuidae), the fall armyworm, represents a significant pest for agriculture in America; it is a host for baculoviruses such as the Spodoptera frugiperda multiple nucleopolyhedrovirus (SfMNPV) (Colombia strain, genotype A) having been classified as a Group II alphabaculovirus making it a very attractive target for bioinsecticidal use. Results: Genome analysis by pyrosequencing revealed that SfMNPV ColA has 145 ORFs, 2 of which were not present in the other sequenced genotypes of the virus (SfMNPV-NicB, SfMNPV-NicG, SfMNPV-19 and SfMNPV-3AP2). An in-depth bioinformatics study showed that ORF023 and ORF024 were acquired by a recent homologous recombination process between Spodoptera frugiperda and Spodoptera litura (the Oriental leafworm moth) nucleopolyhedroviruses. Auxiliary genes are numerous in the affected locus which has a homologous region (hr3), a repetitive sequence associated with genome replication which became lost in SfColA along with 1 ORF. Besides, the mRNAs associated with two acquired genes appeared in the virus' life-cycle during the larval stage. Predictive studies concerning the theoretical proteins identified that ORF023 protein would be a phosphatase involved in DNA repair and that the ORF024 protein would be a membrane polypeptide associated with cell transport. Conclusions: The SfColA genome was thus revealed to be a natural recombinant virus showing evidence of recent horizontal gene transfer between different baculovirus species occurring in nature. This feature could be the cause of its high insecticidal power and therefore SfColA becomes a great candidate for bioinsecticide formulations. © 2015 Barrera et al. |
publishDate |
2015 |
dc.date.created.none.fl_str_mv |
2015 |
dc.date.issued.none.fl_str_mv |
2015 |
dc.date.accessioned.none.fl_str_mv |
2019-03-06T17:37:58Z |
dc.date.available.none.fl_str_mv |
2019-03-06T17:37:58Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
10.1186/s12864-015-2218-5 |
dc.identifier.issn.none.fl_str_mv |
1471-2164 |
dc.identifier.uri.none.fl_str_mv |
http://repository.urosario.edu.co/handle/10336/19203 |
identifier_str_mv |
10.1186/s12864-015-2218-5 1471-2164 |
url |
http://repository.urosario.edu.co/handle/10336/19203 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 1 |
dc.relation.citationTitle.none.fl_str_mv |
BMC Genomics |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 16 |
dc.relation.ispartof.spa.fl_str_mv |
BMC Genomics, ISSN: 1471-2164 Vol. 16, No. 1 (2015) |
dc.relation.uri.spa.fl_str_mv |
https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-015-2218-5 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
institution |
Universidad del Rosario |
dc.source.instname.none.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.none.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
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b1b3f541-7e7a-4547-859a-202dd534a7cd600c9fd7402-84c6-47e3-9879-772f5585777760079653065600e9180914-ab49-4672-9ea0-33d10eb521b460096bb0c03-4792-49d1-9d06-fbf67c71db636002019-03-06T17:37:58Z2019-03-06T17:37:58Z20152015Background: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA genomes with significant biotechnological applications such as biological pest control, recombinant protein production, gene delivery in mammals and as a model of DNA genome evolution. These pathogens infect insects from the orders Lepidoptera, Hymenoptera and Diptera, and have high species diversity which is expressed in their diverse biological properties including morphology, virulence or pathogenicity. Spodoptera frugiperda (Lepidoptera: Noctuidae), the fall armyworm, represents a significant pest for agriculture in America; it is a host for baculoviruses such as the Spodoptera frugiperda multiple nucleopolyhedrovirus (SfMNPV) (Colombia strain, genotype A) having been classified as a Group II alphabaculovirus making it a very attractive target for bioinsecticidal use. Results: Genome analysis by pyrosequencing revealed that SfMNPV ColA has 145 ORFs, 2 of which were not present in the other sequenced genotypes of the virus (SfMNPV-NicB, SfMNPV-NicG, SfMNPV-19 and SfMNPV-3AP2). An in-depth bioinformatics study showed that ORF023 and ORF024 were acquired by a recent homologous recombination process between Spodoptera frugiperda and Spodoptera litura (the Oriental leafworm moth) nucleopolyhedroviruses. Auxiliary genes are numerous in the affected locus which has a homologous region (hr3), a repetitive sequence associated with genome replication which became lost in SfColA along with 1 ORF. Besides, the mRNAs associated with two acquired genes appeared in the virus' life-cycle during the larval stage. Predictive studies concerning the theoretical proteins identified that ORF023 protein would be a phosphatase involved in DNA repair and that the ORF024 protein would be a membrane polypeptide associated with cell transport. Conclusions: The SfColA genome was thus revealed to be a natural recombinant virus showing evidence of recent horizontal gene transfer between different baculovirus species occurring in nature. This feature could be the cause of its high insecticidal power and therefore SfColA becomes a great candidate for bioinsecticide formulations. © 2015 Barrera et al.application/pdf10.1186/s12864-015-2218-51471-2164http://repository.urosario.edu.co/handle/10336/19203engNo. 1BMC GenomicsVol. 16BMC Genomics, ISSN: 1471-2164 Vol. 16, No. 1 (2015)https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-015-2218-5Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURinsecticidemessenger RNAphosphatasepolypeptideAlphabaculovirusanimal cellBaculoviridaebioinformaticscell transportDNA repairDNA virus infectionMicrobiología576600Articlecontrolled studyVirusMicroorganismos recombinantesEvidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperdaarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Barrera, Gloria PatriciaNicolás Belaich, MarianoPatarroyo, Manuel A.Villamizar, Laura FernandaGhiringhelli, Pablo DanielBarrera, Gloria PatriciaNicolás Belaich, MarianoPatarroyo, Manuel AlfonsoVillamizar, Laura FernandaGhiringhelli, Pablo DanielORIGINALEvidence_of_recent_interspecies_horizontal_gene_transfer_regarding_nucleopolyhedrovirus_infection_of_Spodoptera_frugiperda.pdfapplication/pdf2332612https://repository.urosario.edu.co/bitstreams/f8784719-83a7-419b-bab1-c9d42d4592e8/download4915d4f5ac85a63e3ce24a7ad1794bbcMD51TEXTEvidence_of_recent_interspecies_horizontal_gene_transfer_regarding_nucleopolyhedrovirus_infection_of_Spodoptera_frugiperda.pdf.txtEvidence_of_recent_interspecies_horizontal_gene_transfer_regarding_nucleopolyhedrovirus_infection_of_Spodoptera_frugiperda.pdf.txtExtracted texttext/plain71729https://repository.urosario.edu.co/bitstreams/36901a15-f472-442e-af68-a544725fc8fd/download09a57bd393ee3f7f6852b176ad2dff6aMD52THUMBNAILEvidence_of_recent_interspecies_horizontal_gene_transfer_regarding_nucleopolyhedrovirus_infection_of_Spodoptera_frugiperda.pdf.jpgEvidence_of_recent_interspecies_horizontal_gene_transfer_regarding_nucleopolyhedrovirus_infection_of_Spodoptera_frugiperda.pdf.jpgGenerated Thumbnailimage/jpeg3909https://repository.urosario.edu.co/bitstreams/69787341-acb5-4029-829b-13ef19341fc1/download2bf6da15e43625a5787afedc75481aa7MD5310336/19203oai:repository.urosario.edu.co:10336/192032019-09-19 07:37:54.609585https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |