Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study

Quantitative genetic theory predicts that when populations diverge by drift the interspecific divergence (D matrix), calculated from species means, will be proportional to the average value of the additive genetic variance–covariance matrix, or G matrix. Most empirical studies in which this hypothes...

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Fecha de publicación:
2007
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/27037
Acceso en línea:
https://doi.org/10.1111/j.1558-5646.2007.00216.x
https://repository.urosario.edu.co/handle/10336/27037
Palabra clave:
Comparative method
Evolutionary constraint
Genetic constraint
Genetic variance–covariance matrix
Independent contrasts
Quantitative genetics
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id EDOCUR2_d248b96da9369eda76d0964cc87d088c
oai_identifier_str oai:repository.urosario.edu.co:10336/27037
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
spelling f25cfa5c-68b5-4108-9437-477e6a782bb2-12020-08-19T14:40:49Z2020-08-19T14:40:49Z2007-10-10Quantitative genetic theory predicts that when populations diverge by drift the interspecific divergence (D matrix), calculated from species means, will be proportional to the average value of the additive genetic variance–covariance matrix, or G matrix. Most empirical studies in which this hypothesis has been investigated have ignored phylogenetic nonindependence among included taxa. Baker and Wilkinson (2003; also Revell et al. 2007) used a test for constraint in which the D matrix is calculated from phylogenetically independent contrasts (Felsenstein 1985) instead of directly from the species means. I use computer simulations to show that, on average, when the process of evolution is genetic drift, the divergence matrix calculated from independent contrasts (DIC ) is more highly correlated with G than is the divergence matrix calculated ignoring phylogenetic nonindependence (D ). This effect is more pronounced when speciation is initially slow but increases over time than when speciation decreases over time. Finally, when evolution is primarily by drift but phenotype space is bounded (as if by functional constraint) the average correlation is decreased between both G and D or DIC , however the correlation between G and DIC is much larger than between G and D . Although limited in scope, to my knowledge this is the first study to use individual?based quantitative genetic simulations in a phylogenetic context.application/pdfhttps://doi.org/10.1111/j.1558-5646.2007.00216.xISSN: 0014-3820EISSN: 1558-5646https://repository.urosario.edu.co/handle/10336/27037engSociety for the Study of Evolution2727No. 112720Evolution: International Journal of Organic EvolutionVol. 61Evolution: International Journal of Organic Evolution, ISSN: 0014-3820;EISSN: 1558-5646, Vol.61, No.11 (November 2007); pp. 2720-2727https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1558-5646.2007.00216.xAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Evolution: International Journal of Organic Evolutioninstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURComparative methodEvolutionary constraintGenetic constraintGenetic variance–covariance matrixIndependent contrastsQuantitative geneticsTesting the genetic constraint hypothesis in a phylogenetic context: a simulation studyPrueba de la hipótesis de la restricción genética en un contexto filogenético: un estudio de simulaciónarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Revell, Liam James10336/27037oai:repository.urosario.edu.co:10336/270372022-05-02 07:37:21.8678https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
dc.title.TranslatedTitle.spa.fl_str_mv Prueba de la hipótesis de la restricción genética en un contexto filogenético: un estudio de simulación
title Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
spellingShingle Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
Comparative method
Evolutionary constraint
Genetic constraint
Genetic variance–covariance matrix
Independent contrasts
Quantitative genetics
title_short Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
title_full Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
title_fullStr Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
title_full_unstemmed Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
title_sort Testing the genetic constraint hypothesis in a phylogenetic context: a simulation study
dc.subject.keyword.spa.fl_str_mv Comparative method
Evolutionary constraint
Genetic constraint
Genetic variance–covariance matrix
Independent contrasts
Quantitative genetics
topic Comparative method
Evolutionary constraint
Genetic constraint
Genetic variance–covariance matrix
Independent contrasts
Quantitative genetics
description Quantitative genetic theory predicts that when populations diverge by drift the interspecific divergence (D matrix), calculated from species means, will be proportional to the average value of the additive genetic variance–covariance matrix, or G matrix. Most empirical studies in which this hypothesis has been investigated have ignored phylogenetic nonindependence among included taxa. Baker and Wilkinson (2003; also Revell et al. 2007) used a test for constraint in which the D matrix is calculated from phylogenetically independent contrasts (Felsenstein 1985) instead of directly from the species means. I use computer simulations to show that, on average, when the process of evolution is genetic drift, the divergence matrix calculated from independent contrasts (DIC ) is more highly correlated with G than is the divergence matrix calculated ignoring phylogenetic nonindependence (D ). This effect is more pronounced when speciation is initially slow but increases over time than when speciation decreases over time. Finally, when evolution is primarily by drift but phenotype space is bounded (as if by functional constraint) the average correlation is decreased between both G and D or DIC , however the correlation between G and DIC is much larger than between G and D . Although limited in scope, to my knowledge this is the first study to use individual?based quantitative genetic simulations in a phylogenetic context.
publishDate 2007
dc.date.created.spa.fl_str_mv 2007-10-10
dc.date.accessioned.none.fl_str_mv 2020-08-19T14:40:49Z
dc.date.available.none.fl_str_mv 2020-08-19T14:40:49Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1111/j.1558-5646.2007.00216.x
dc.identifier.issn.none.fl_str_mv ISSN: 0014-3820
EISSN: 1558-5646
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/27037
url https://doi.org/10.1111/j.1558-5646.2007.00216.x
https://repository.urosario.edu.co/handle/10336/27037
identifier_str_mv ISSN: 0014-3820
EISSN: 1558-5646
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 2727
dc.relation.citationIssue.none.fl_str_mv No. 11
dc.relation.citationStartPage.none.fl_str_mv 2720
dc.relation.citationTitle.none.fl_str_mv Evolution: International Journal of Organic Evolution
dc.relation.citationVolume.none.fl_str_mv Vol. 61
dc.relation.ispartof.spa.fl_str_mv Evolution: International Journal of Organic Evolution, ISSN: 0014-3820;EISSN: 1558-5646, Vol.61, No.11 (November 2007); pp. 2720-2727
dc.relation.uri.spa.fl_str_mv https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1558-5646.2007.00216.x
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Society for the Study of Evolution
dc.source.spa.fl_str_mv Evolution: International Journal of Organic Evolution
institution Universidad del Rosario
dc.source.instname.none.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
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