Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro
BACKGROUND The leishmaniases are complex neglected diseases caused by protozoan parasites of the genus Leishmania. Leishmania braziliensis is the main etiological agent of cutaneous leishmaniasis in the New World. In recent studies, genomic changes such as chromosome and gene copy number variations...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2020
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/24900
- Acceso en línea:
- https://repository.urosario.edu.co/handle/10336/24900
- Palabra clave:
- ABC transporter
Amastin-like protein
Copy number variation
Heat shock protein
Leishmania braziliensis
Temperature shift
Transcriptome profile
transcriptome
adaptation
animal
copy number variation
gene expression profiling
genetics
Leishmania braziliensis
physiology
temperature
Adaptation
Physiological
Animals
DNA Copy Number Variations
Gene Expression Profiling
Genetic Profile
Leishmania braziliensis
Temperature
Transcriptome
- Rights
- License
- Bloqueado (Texto referencial)
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oai:repository.urosario.edu.co:10336/24900 |
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EDOCUR2 |
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Repositorio EdocUR - U. Rosario |
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ea006427-aa9b-4c76-bc1b-10c18a833317-19d8fbb84-3936-4011-99d5-3ec09a1942b4-1b21e2bed-2caa-4b8f-bde4-ef70f15d1937-13a39d4a1-8a8d-431d-951a-63c54f374456-110117161186002020-06-11T13:21:46Z2020-06-11T13:21:46Z2020BACKGROUND The leishmaniases are complex neglected diseases caused by protozoan parasites of the genus Leishmania. Leishmania braziliensis is the main etiological agent of cutaneous leishmaniasis in the New World. In recent studies, genomic changes such as chromosome and gene copy number variations (CNVs), as well as transcriptomic changes have been highlighted as mechanisms used by Leishmania species to adapt to stress situations. OBJECTIVES The aim of this study was to determine the effect of short-term minor temperature shifts in the genomic and transcriptomic responses of L. braziliensis promastigotes in vitro. METHODS Growth curves, genome and transcriptome sequencing of L. braziliensis promastigotes were conducted from cultures exposed to three different temperatures (24ºC, 28ºC and 30ºC) compared with the control temperature (26ºC). FINDINGS Our results showed a decrease in L. braziliensis proliferation at 30ºC, with around 3% of the genes showing CNVs at each temperature, and transcriptomic changes in genes encoding amastin surface-like proteins, heat shock proteins and transport proteins, which may indicate a direct response to temperature stress. MAIN CONCLUSIONS This study provides evidence that L. braziliensis promastigotes exhibit a decrease in cell density, and noticeable changes in the transcriptomic profiles. However, there were not perceptible changes at chromosome CNVs and only ~3% of the genes changed their copies in each treatment. © 2020, Fundacao Oswaldo Cruz. All rights reserved.application/pdf0074-02761678-8060https://repository.urosario.edu.co/handle/10336/24900engFundacao Oswaldo CruzNo. 2Memorias do Instituto Oswaldo CruzVol. 115Memorias do Instituto Oswaldo Cruz, ISSN: 0074-0276;1678-8060, Vol.115, No.2 (2020); pp. -https://www.scopus.com/inward/record.uri?eid=2-s2.0-85084250124&doi=10.1590%2f0074-02760190431&partnerID=40&md5=09d427b2627b94487c04ece959ae4cceBloqueado (Texto referencial)http://purl.org/coar/access_right/c_14cbinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURABC transporterAmastin-like proteinCopy number variationHeat shock proteinLeishmania braziliensisTemperature shiftTranscriptome profiletranscriptomeadaptationanimalcopy number variationgene expression profilinggeneticsLeishmania braziliensisphysiologytemperatureAdaptationPhysiologicalAnimalsDNA Copy Number VariationsGene Expression ProfilingGenetic ProfileLeishmania braziliensisTemperatureTranscriptomeMinor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitroarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Ballesteros, NathaliaVasquez, Nubia M.Patino, Luz H.Cruz-Saavedra, LissaRamírez González, Juan David10336/24900oai:repository.urosario.edu.co:10336/249002021-06-03 00:50:49.778https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
title |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
spellingShingle |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro ABC transporter Amastin-like protein Copy number variation Heat shock protein Leishmania braziliensis Temperature shift Transcriptome profile transcriptome adaptation animal copy number variation gene expression profiling genetics Leishmania braziliensis physiology temperature Adaptation Physiological Animals DNA Copy Number Variations Gene Expression Profiling Genetic Profile Leishmania braziliensis Temperature Transcriptome |
title_short |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
title_full |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
title_fullStr |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
title_full_unstemmed |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
title_sort |
Minor temperature shifts do not affect chromosomal ploidy but cause transcriptomic changes in Leishmania braziliensis promastigotes in vitro |
dc.subject.keyword.spa.fl_str_mv |
ABC transporter Amastin-like protein Copy number variation Heat shock protein Leishmania braziliensis Temperature shift Transcriptome profile transcriptome adaptation animal copy number variation gene expression profiling genetics Leishmania braziliensis physiology temperature Adaptation Physiological Animals DNA Copy Number Variations Gene Expression Profiling Genetic Profile Leishmania braziliensis Temperature Transcriptome |
topic |
ABC transporter Amastin-like protein Copy number variation Heat shock protein Leishmania braziliensis Temperature shift Transcriptome profile transcriptome adaptation animal copy number variation gene expression profiling genetics Leishmania braziliensis physiology temperature Adaptation Physiological Animals DNA Copy Number Variations Gene Expression Profiling Genetic Profile Leishmania braziliensis Temperature Transcriptome |
description |
BACKGROUND The leishmaniases are complex neglected diseases caused by protozoan parasites of the genus Leishmania. Leishmania braziliensis is the main etiological agent of cutaneous leishmaniasis in the New World. In recent studies, genomic changes such as chromosome and gene copy number variations (CNVs), as well as transcriptomic changes have been highlighted as mechanisms used by Leishmania species to adapt to stress situations. OBJECTIVES The aim of this study was to determine the effect of short-term minor temperature shifts in the genomic and transcriptomic responses of L. braziliensis promastigotes in vitro. METHODS Growth curves, genome and transcriptome sequencing of L. braziliensis promastigotes were conducted from cultures exposed to three different temperatures (24ºC, 28ºC and 30ºC) compared with the control temperature (26ºC). FINDINGS Our results showed a decrease in L. braziliensis proliferation at 30ºC, with around 3% of the genes showing CNVs at each temperature, and transcriptomic changes in genes encoding amastin surface-like proteins, heat shock proteins and transport proteins, which may indicate a direct response to temperature stress. MAIN CONCLUSIONS This study provides evidence that L. braziliensis promastigotes exhibit a decrease in cell density, and noticeable changes in the transcriptomic profiles. However, there were not perceptible changes at chromosome CNVs and only ~3% of the genes changed their copies in each treatment. © 2020, Fundacao Oswaldo Cruz. All rights reserved. |
publishDate |
2020 |
dc.date.accessioned.none.fl_str_mv |
2020-06-11T13:21:46Z |
dc.date.available.none.fl_str_mv |
2020-06-11T13:21:46Z |
dc.date.created.spa.fl_str_mv |
2020 |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.issn.none.fl_str_mv |
0074-0276 1678-8060 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/24900 |
identifier_str_mv |
0074-0276 1678-8060 |
url |
https://repository.urosario.edu.co/handle/10336/24900 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 2 |
dc.relation.citationTitle.none.fl_str_mv |
Memorias do Instituto Oswaldo Cruz |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 115 |
dc.relation.ispartof.spa.fl_str_mv |
Memorias do Instituto Oswaldo Cruz, ISSN: 0074-0276;1678-8060, Vol.115, No.2 (2020); pp. - |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85084250124&doi=10.1590%2f0074-02760190431&partnerID=40&md5=09d427b2627b94487c04ece959ae4cce |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_14cb |
dc.rights.acceso.spa.fl_str_mv |
Bloqueado (Texto referencial) |
rights_invalid_str_mv |
Bloqueado (Texto referencial) http://purl.org/coar/access_right/c_14cb |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Fundacao Oswaldo Cruz |
institution |
Universidad del Rosario |
dc.source.instname.spa.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167483589853184 |