Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons

Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon...

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2017
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Universidad del Rosario
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Repositorio EdocUR - U. Rosario
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eng
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oai:repository.urosario.edu.co:10336/18812
Acceso en línea:
https://doi.org/10.1371/journal.pgen.1006820
http://repository.urosario.edu.co/handle/10336/18812
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Article
Female
Female
Humans
Un-explained visual loss
Silicone oil
Vitrectomy
Retinal detachment
Müller cells
Neuronal apoptosis
Potassium
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License
Abierto (Texto Completo)
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network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
dc.title.spa.fl_str_mv Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
title Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
spellingShingle Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
Article
Female
Female
Humans
Un-explained visual loss
Silicone oil
Vitrectomy
Retinal detachment
Müller cells
Neuronal apoptosis
Potassium
title_short Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
title_full Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
title_fullStr Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
title_full_unstemmed Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
title_sort Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
dc.creator.google.spa.fl_str_mv Contessa E., Edgar
Rohrer, Michael D.
Stone, Donald U.
Vyse, Timothy J.
Harley, John B.
Gaffney, Patrick M.
James, Judith A.
Turner, Sean
Alevizos, Ilias
Anaya, Juan-Manuel
Rhodus, Nelson L.
Segal, Barbara M.
Montgomery, Courtney G.
Scofield, R. Hal
Kovats, Susan
Mariette, Xavier
Mariette, Xavier
Rönnblom, Lars
Witte, Torsten
Rischmueller, Maureen
Wahren-Herlenius, Marie
Omdal, Roald
Jonsson, Roland
Ng, Wan-Fai
Nordmark, Gunnel
Lessard, Christopher J.
Sivils, Kathy L.
dc.subject.keyword.spa.fl_str_mv Article
Female
Female
Humans
topic Article
Female
Female
Humans
Un-explained visual loss
Silicone oil
Vitrectomy
Retinal detachment
Müller cells
Neuronal apoptosis
Potassium
dc.subject.keyword.eng.fl_str_mv Un-explained visual loss
dc.subject.keyword.none.fl_str_mv Silicone oil
Vitrectomy
Retinal detachment
Müller cells
Neuronal apoptosis
Potassium
description Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon (IFN) pathway is a prominent feature of SS and is correlated with increased autoantibody titers and disease severity. To identify genetic determinants of IFN pathway dysregulation in SS, we performed cis-expression quantitative trait locus (eQTL) analyses focusing on differentially expressed type I IFN-inducible transcripts identified through a transcriptome profiling study. Multiple cis-eQTLs were associated with transcript levels of 2'-5'-oligoadenylate synthetase 1 (OAS1) peaking at rs10774671 (PeQTL= 6.05 × 10−14). Association of rs10774671 with SS susceptibility was identified and confirmed through meta-analysis of two independent cohorts (Pmeta= 2.59 × 10−9; odds ratio = 0.75; 95% confidence interval = 0.66–0.86). The risk allele of rs10774671 shifts splicing of OAS1 from production of the p46 isoform to multiple alternative transcripts, including p42, p48, and p44. We found that the isoforms were differentially expressed within each genotype in controls and patients with and without autoantibodies. Furthermore, our results showed that the three alternatively spliced isoforms lacked translational response to type I IFN stimulation. The p48 and p44 isoforms also had impaired protein expression governed by the 3' end of the transcripts. The SS risk allele of rs10774671 has been shown by others to be associated with reduced OAS1 enzymatic activity and ability to clear viral infections, as well as reduced responsiveness to IFN treatment. Our results establish OAS1 as a risk locus for SS and support a potential role for defective viral clearance due to altered IFN response as a genetic pathophysiological basis of this complex autoimmune disease. © 2017 Public Library of Science. All Rights Reserved.
publishDate 2017
dc.date.created.none.fl_str_mv 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2018-12-13T17:08:55Z
dc.date.available.none.fl_str_mv 2018-12-13T17:08:55Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1371/journal.pgen.1006820
dc.identifier.issn.none.fl_str_mv ISSN 1553-7390
dc.identifier.uri.none.fl_str_mv http://repository.urosario.edu.co/handle/10336/18812
url https://doi.org/10.1371/journal.pgen.1006820
http://repository.urosario.edu.co/handle/10336/18812
identifier_str_mv ISSN 1553-7390
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 6
dc.relation.citationTitle.none.fl_str_mv PLoS Genetics
dc.relation.citationVolume.none.fl_str_mv Vol. 13
dc.relation.ispartof.spa.fl_str_mv PLoS Genetics, ISSN: 1553-7390, Vol. 13/No. 6 (2017)
dc.relation.uri.spa.fl_str_mv https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1006820&type=printable
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
dc.rights.cc.spa.fl_str_mv https://creativecommons.org/publicdomain/zero/1.0/
dc.rights.uri.none.fl_str_mv https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820
rights_invalid_str_mv Abierto (Texto Completo)
https://creativecommons.org/publicdomain/zero/1.0/
https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
institution Universidad del Rosario
dc.source.bibliographicCitation.spa.fl_str_mv Helmick, C.G., Felson, D.T., Lawrence, R.C., Gabriel, S., Hirsch, R., Kwoh, C.K., Estimates of the prevalence of arthritis and other rheumatic conditions in the United States. Part I (2008) Arthritis Rheum, 58 (1), pp. 15-25. , 18163481
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dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
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HalKovats, SusanMariette, XavierMariette, XavierRönnblom, LarsWitte, TorstenRischmueller, MaureenWahren-Herlenius, MarieOmdal, RoaldJonsson, RolandNg, Wan-FaiNordmark, GunnelLessard, Christopher J.Sivils, Kathy L.2018-12-13T17:08:55Z2018-12-13T17:08:55Z20172017Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon (IFN) pathway is a prominent feature of SS and is correlated with increased autoantibody titers and disease severity. To identify genetic determinants of IFN pathway dysregulation in SS, we performed cis-expression quantitative trait locus (eQTL) analyses focusing on differentially expressed type I IFN-inducible transcripts identified through a transcriptome profiling study. Multiple cis-eQTLs were associated with transcript levels of 2'-5'-oligoadenylate synthetase 1 (OAS1) peaking at rs10774671 (PeQTL= 6.05 × 10−14). Association of rs10774671 with SS susceptibility was identified and confirmed through meta-analysis of two independent cohorts (Pmeta= 2.59 × 10−9; odds ratio = 0.75; 95% confidence interval = 0.66–0.86). The risk allele of rs10774671 shifts splicing of OAS1 from production of the p46 isoform to multiple alternative transcripts, including p42, p48, and p44. We found that the isoforms were differentially expressed within each genotype in controls and patients with and without autoantibodies. Furthermore, our results showed that the three alternatively spliced isoforms lacked translational response to type I IFN stimulation. The p48 and p44 isoforms also had impaired protein expression governed by the 3' end of the transcripts. The SS risk allele of rs10774671 has been shown by others to be associated with reduced OAS1 enzymatic activity and ability to clear viral infections, as well as reduced responsiveness to IFN treatment. Our results establish OAS1 as a risk locus for SS and support a potential role for defective viral clearance due to altered IFN response as a genetic pathophysiological basis of this complex autoimmune disease. © 2017 Public Library of Science. All Rights Reserved.application/pdfhttps://doi.org/10.1371/journal.pgen.1006820ISSN 1553-7390http://repository.urosario.edu.co/handle/10336/18812engNo. 6PLoS GeneticsVol. 13PLoS Genetics, ISSN: 1553-7390, Vol. 13/No. 6 (2017)https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1006820&type=printableAbierto (Texto Completo)https://creativecommons.org/publicdomain/zero/1.0/https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820http://purl.org/coar/access_right/c_abf2Helmick, C.G., Felson, D.T., Lawrence, R.C., Gabriel, S., Hirsch, R., Kwoh, C.K., Estimates of the prevalence of arthritis and other rheumatic conditions in the United States. Part I (2008) Arthritis Rheum, 58 (1), pp. 15-25. , 18163481instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURArticleFemaleFemaleHumansUn-explained visual lossSilicone oilVitrectomyRetinal detachmentMüller cellsNeuronal apoptosisPotassiumIdentification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferonsarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Li, HeReksten, Tove RagnaIce, John A.Kelly, Jennifer A.Adrianto, IndraRasmussen, AstridWang, ShaofengHe, BoGrundahl, Kiely M.Glenn, Stuart B.Miceli-Richard, CorinneBowman, SimonLester, SueEriksson, PerEloranta, Maija-LeenaBrun, Johan G.Gøransson, Lasse G.Harboe, ErnaGuthridge, Joel M.Kaufman, Kenneth M.Kvarnström, MarikaCunninghame Graham, Deborah S.Patel, KetanAdler, Adam J.Farris, A. DariseBrennan, Michael T.Chodosh, JamesGopalakrishnan, RajaramWeisman, Michael H.Venuturupalli, SwamyWallace, Daniel J.Hefner, Kimberly S.Houston, Glen D.Huang, Andrew J. W.Hughes, Pamela J.Lewis, David M.Radfar, LidaVista, Evan S.Contessa E., EdgarRohrer, Michael D.Stone, Donald U.Vyse, Timothy J.Harley, John B.Gaffney, Patrick M.James, Judith A.Turner, SeanAlevizos, IliasAnaya, Juan-ManuelRhodus, Nelson L.Segal, Barbara M.Montgomery, Courtney G.Scofield, R. HalKovats, SusanMariette, XavierRönnblom, LarsWitte, TorstenRischmueller, MaureenWahren-Herlenius, MarieOmdal, RoaldJonsson, RolandNg, Wan-FaiNordmark, GunnelLessard, Christopher J.Sivils, Kathy L.Li, HeReksten, Tove RagnaIce, John A.Kelly, Jennifer A.Adrianto, IndraRasmussen, AstridWang, ShaofengHe, BoGrundahl, Kiely M.Glenn, Stuart B.Miceli-Richard, CorinneBowman, SimonLester, SueEriksson, PerEloranta, Maija-LeenaBrun, Johan G.Gøransson, Lasse G.Harboe, ErnaKaufman, Kenneth M.Kvarnström, MarikaCunninghame Graham, Deborah S.Patel, KetanAdler, Adam J.Farris, A. DariseBrennan, Michael T.Chodosh, JamesGopalakrishnan, RajaramWeisman, Michael H.Venuturupalli, SwamyWallace, Daniel J.Hefner, Kimberly S.Houston, Glen D.Huang, Andrew J. W.Hughes, Pamela J.Lewis, David M.Radfar, LidaVista, Evan S.ORIGINAL51.pdfapplication/pdf9235242https://repository.urosario.edu.co/bitstreams/8bfdb4f8-a60c-4ae6-9af7-cca0327c7909/download49d677b064547ba5a16b3bb6942e0638MD51TEXT51.pdf.txt51.pdf.txtExtracted texttext/plain110238https://repository.urosario.edu.co/bitstreams/85fe9c43-37ac-4383-9848-ed68f9e06e7e/download6d8e60baabcd1e344e96059706a4bb16MD52THUMBNAIL51.pdf.jpg51.pdf.jpgGenerated Thumbnailimage/jpeg4820https://repository.urosario.edu.co/bitstreams/4eef1d06-04c2-401d-a325-0566acd8ca9e/download1a0b2886b00d9c098b1f26c9e387f2dbMD5310336/18812oai:repository.urosario.edu.co:10336/188122020-05-12 05:41:26.595https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co