Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons
Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2017
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/18812
- Acceso en línea:
- https://doi.org/10.1371/journal.pgen.1006820
http://repository.urosario.edu.co/handle/10336/18812
- Palabra clave:
- Article
Female
Female
Humans
Un-explained visual loss
Silicone oil
Vitrectomy
Retinal detachment
Müller cells
Neuronal apoptosis
Potassium
- Rights
- License
- Abierto (Texto Completo)
id |
EDOCUR2_a01cd10f37cc4435d4b98e513b39d765 |
---|---|
oai_identifier_str |
oai:repository.urosario.edu.co:10336/18812 |
network_acronym_str |
EDOCUR2 |
network_name_str |
Repositorio EdocUR - U. Rosario |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
title |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
spellingShingle |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons Article Female Female Humans Un-explained visual loss Silicone oil Vitrectomy Retinal detachment Müller cells Neuronal apoptosis Potassium |
title_short |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
title_full |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
title_fullStr |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
title_full_unstemmed |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
title_sort |
Identification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferons |
dc.creator.google.spa.fl_str_mv |
Contessa E., Edgar Rohrer, Michael D. Stone, Donald U. Vyse, Timothy J. Harley, John B. Gaffney, Patrick M. James, Judith A. Turner, Sean Alevizos, Ilias Anaya, Juan-Manuel Rhodus, Nelson L. Segal, Barbara M. Montgomery, Courtney G. Scofield, R. Hal Kovats, Susan Mariette, Xavier Mariette, Xavier Rönnblom, Lars Witte, Torsten Rischmueller, Maureen Wahren-Herlenius, Marie Omdal, Roald Jonsson, Roland Ng, Wan-Fai Nordmark, Gunnel Lessard, Christopher J. Sivils, Kathy L. |
dc.subject.keyword.spa.fl_str_mv |
Article Female Female Humans |
topic |
Article Female Female Humans Un-explained visual loss Silicone oil Vitrectomy Retinal detachment Müller cells Neuronal apoptosis Potassium |
dc.subject.keyword.eng.fl_str_mv |
Un-explained visual loss |
dc.subject.keyword.none.fl_str_mv |
Silicone oil Vitrectomy Retinal detachment Müller cells Neuronal apoptosis Potassium |
description |
Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon (IFN) pathway is a prominent feature of SS and is correlated with increased autoantibody titers and disease severity. To identify genetic determinants of IFN pathway dysregulation in SS, we performed cis-expression quantitative trait locus (eQTL) analyses focusing on differentially expressed type I IFN-inducible transcripts identified through a transcriptome profiling study. Multiple cis-eQTLs were associated with transcript levels of 2'-5'-oligoadenylate synthetase 1 (OAS1) peaking at rs10774671 (PeQTL= 6.05 × 10−14). Association of rs10774671 with SS susceptibility was identified and confirmed through meta-analysis of two independent cohorts (Pmeta= 2.59 × 10−9; odds ratio = 0.75; 95% confidence interval = 0.66–0.86). The risk allele of rs10774671 shifts splicing of OAS1 from production of the p46 isoform to multiple alternative transcripts, including p42, p48, and p44. We found that the isoforms were differentially expressed within each genotype in controls and patients with and without autoantibodies. Furthermore, our results showed that the three alternatively spliced isoforms lacked translational response to type I IFN stimulation. The p48 and p44 isoforms also had impaired protein expression governed by the 3' end of the transcripts. The SS risk allele of rs10774671 has been shown by others to be associated with reduced OAS1 enzymatic activity and ability to clear viral infections, as well as reduced responsiveness to IFN treatment. Our results establish OAS1 as a risk locus for SS and support a potential role for defective viral clearance due to altered IFN response as a genetic pathophysiological basis of this complex autoimmune disease. © 2017 Public Library of Science. All Rights Reserved. |
publishDate |
2017 |
dc.date.created.none.fl_str_mv |
2017 |
dc.date.issued.none.fl_str_mv |
2017 |
dc.date.accessioned.none.fl_str_mv |
2018-12-13T17:08:55Z |
dc.date.available.none.fl_str_mv |
2018-12-13T17:08:55Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1371/journal.pgen.1006820 |
dc.identifier.issn.none.fl_str_mv |
ISSN 1553-7390 |
dc.identifier.uri.none.fl_str_mv |
http://repository.urosario.edu.co/handle/10336/18812 |
url |
https://doi.org/10.1371/journal.pgen.1006820 http://repository.urosario.edu.co/handle/10336/18812 |
identifier_str_mv |
ISSN 1553-7390 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 6 |
dc.relation.citationTitle.none.fl_str_mv |
PLoS Genetics |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 13 |
dc.relation.ispartof.spa.fl_str_mv |
PLoS Genetics, ISSN: 1553-7390, Vol. 13/No. 6 (2017) |
dc.relation.uri.spa.fl_str_mv |
https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1006820&type=printable |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
dc.rights.cc.spa.fl_str_mv |
https://creativecommons.org/publicdomain/zero/1.0/ |
dc.rights.uri.none.fl_str_mv |
https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820 |
rights_invalid_str_mv |
Abierto (Texto Completo) https://creativecommons.org/publicdomain/zero/1.0/ https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820 http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
institution |
Universidad del Rosario |
dc.source.bibliographicCitation.spa.fl_str_mv |
Helmick, C.G., Felson, D.T., Lawrence, R.C., Gabriel, S., Hirsch, R., Kwoh, C.K., Estimates of the prevalence of arthritis and other rheumatic conditions in the United States. Part I (2008) Arthritis Rheum, 58 (1), pp. 15-25. , 18163481 |
dc.source.instname.none.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.none.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
bitstream.url.fl_str_mv |
https://repository.urosario.edu.co/bitstreams/8bfdb4f8-a60c-4ae6-9af7-cca0327c7909/download https://repository.urosario.edu.co/bitstreams/85fe9c43-37ac-4383-9848-ed68f9e06e7e/download https://repository.urosario.edu.co/bitstreams/4eef1d06-04c2-401d-a325-0566acd8ca9e/download |
bitstream.checksum.fl_str_mv |
49d677b064547ba5a16b3bb6942e0638 6d8e60baabcd1e344e96059706a4bb16 1a0b2886b00d9c098b1f26c9e387f2db |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167494136430592 |
spelling |
3a047a7d-a75c-4b95-b754-89b6ae1196a4600d50e5fc4-e823-44f3-8b6a-39a2a11a791c6000ff58969-3525-4086-b979-99b19b7069926006eceab3a-7c5d-4670-a9a8-60ea0c978b03600461a62d7-4816-4af4-8263-2f5018f100c2600d0f936d3-cf56-4255-b9a0-753f60bd91fa600f4cd4681-59be-4891-be45-fa4e4261712260083e5e876-2686-4616-a755-0ec7f14fae786001c21b45b-ec84-4371-9520-2d5bd55e8bd4600e4c3809e-f0e3-4273-9f2e-21418f35d5d36009ca9c1da-792e-43ef-b0f1-8ca2b0461b4760066829c28-175f-4c30-9fdd-5960c1375b46600c2343044-1bb8-48c9-a63b-fe8b7d9b7443600f5a7ba76-ebea-4e93-a940-825bdb817650600560e0330-376c-4980-986f-9e65a022116a600d86ffd96-36f9-42fb-914b-38ee462872ae6002ca38e29-121b-473b-913f-049eed7f031a600d3496e27-7156-4acf-bd27-af2c2f9c43b960034b38e53-a3b1-4101-a8df-21cac0cb931660006d736b0-74df-4660-b37e-3a005f8732a560043a19bcc-0d22-4c26-81be-a18e74109a21600794b6c77-330d-4f99-9523-8c00523724d860078739ead-5b14-46c6-894e-c69ec6c86e37600d647188d-b1f5-479d-8a29-c3ae4d053da060030f8aef6-74cb-4cd9-82a2-b2dbbdc62ef86005a40686a-b972-4ef3-b42e-f148e1ae8e5e60009316ce8-a0d8-4cc8-bb67-bfc7365fa75660084f3ba35-4621-41c6-944a-b82e6559fa3f6000a719eb1-6601-4007-b960-2ed22865da75600821ade33-fae6-46c7-8c99-5d31bf04646760088376d3a-fb65-458e-8e63-86a3ca5eef8d600a6b293f7-21d5-4c13-b3f2-0ce5db8af734600f6e03630-5cf4-437a-b87e-92dd380745cd600c58552ce-b19d-4b39-a2b1-63584100236960033696675-14fa-476e-a642-7b73e739e5696005d2038a3-6554-4a21-a4ea-a2de41410ebe600ece1b29f-7986-48f7-9115-ad5818e4192e600776ea5f1-1aa6-4b6d-831d-cdd18b2157086003a8ebfdc-18ad-4596-b89e-dcb294a74bb6600a0c7aa6c-608c-4759-a16b-4acf93f7dcce6005b8efcba-589c-4758-b654-96b1e1a0d402600aa79f5ef-3d3d-434b-9953-b294f92dcb536007db99122-14fd-4cf7-8433-c6ea25aac953600745e1f5a-a9e9-4bc2-b74c-b681dc65c7586008413200a-d245-4a47-9bf8-a656d5ac34ae6002719b358-8bf7-4e0c-a426-c3ff8dd3c8df600a8d667c9-6cc3-4643-890b-db820da2fe3c60019474778600a6b7b7c0-23c4-494f-acc2-53bed4fbfd3a600a0a51803-4d24-43ee-9f5f-e602e88e6462600b40152fc-5af2-4fa1-b4cf-ac8505185e9b6001deaa8bc-795f-4973-8456-d0f36a56f0b56006b512f3c-b6ef-4aa9-9a3e-2e9b5753fb816004413ca49-5530-4f8f-831c-a8f7fd3f1bbf60017d5af6e-8e5a-45eb-af78-afcaca05ff4e600043f8031-5669-4b23-8cb8-44b65850ee7a600cf3ed0e9-3688-42aa-af8e-e613ab16d539600ac331324-275b-47c1-a6f1-7485366b50d96004acddfcf-ec3c-4816-a84e-4e866aa78e6960039f5f63d-d50a-4890-bb9a-00b5ef0fc878600e9e3fc28-a9f5-41a1-a549-2e436a5503b2600af598810-b90a-4e3b-b00d-087353631d04600cd456015-ca10-47cd-99bf-cbceb069e0cf6005fb8781b-4669-4984-a659-352915719e85600Contessa E., EdgarRohrer, Michael D.Stone, Donald U.Vyse, Timothy J.Harley, John B.Gaffney, Patrick M.James, Judith A.Turner, SeanAlevizos, IliasAnaya, Juan-ManuelRhodus, Nelson L.Segal, Barbara M.Montgomery, Courtney G.Scofield, R. HalKovats, SusanMariette, XavierMariette, XavierRönnblom, LarsWitte, TorstenRischmueller, MaureenWahren-Herlenius, MarieOmdal, RoaldJonsson, RolandNg, Wan-FaiNordmark, GunnelLessard, Christopher J.Sivils, Kathy L.2018-12-13T17:08:55Z2018-12-13T17:08:55Z20172017Sjögren’s syndrome (SS) is a common, autoimmune exocrinopathy distinguished by keratoconjunctivitis sicca and xerostomia. Patients frequently develop serious complications including lymphoma, pulmonary dysfunction, neuropathy, vasculitis, and debilitating fatigue. Dysregulation of type I interferon (IFN) pathway is a prominent feature of SS and is correlated with increased autoantibody titers and disease severity. To identify genetic determinants of IFN pathway dysregulation in SS, we performed cis-expression quantitative trait locus (eQTL) analyses focusing on differentially expressed type I IFN-inducible transcripts identified through a transcriptome profiling study. Multiple cis-eQTLs were associated with transcript levels of 2'-5'-oligoadenylate synthetase 1 (OAS1) peaking at rs10774671 (PeQTL= 6.05 × 10−14). Association of rs10774671 with SS susceptibility was identified and confirmed through meta-analysis of two independent cohorts (Pmeta= 2.59 × 10−9; odds ratio = 0.75; 95% confidence interval = 0.66–0.86). The risk allele of rs10774671 shifts splicing of OAS1 from production of the p46 isoform to multiple alternative transcripts, including p42, p48, and p44. We found that the isoforms were differentially expressed within each genotype in controls and patients with and without autoantibodies. Furthermore, our results showed that the three alternatively spliced isoforms lacked translational response to type I IFN stimulation. The p48 and p44 isoforms also had impaired protein expression governed by the 3' end of the transcripts. The SS risk allele of rs10774671 has been shown by others to be associated with reduced OAS1 enzymatic activity and ability to clear viral infections, as well as reduced responsiveness to IFN treatment. Our results establish OAS1 as a risk locus for SS and support a potential role for defective viral clearance due to altered IFN response as a genetic pathophysiological basis of this complex autoimmune disease. © 2017 Public Library of Science. All Rights Reserved.application/pdfhttps://doi.org/10.1371/journal.pgen.1006820ISSN 1553-7390http://repository.urosario.edu.co/handle/10336/18812engNo. 6PLoS GeneticsVol. 13PLoS Genetics, ISSN: 1553-7390, Vol. 13/No. 6 (2017)https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1006820&type=printableAbierto (Texto Completo)https://creativecommons.org/publicdomain/zero/1.0/https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820http://purl.org/coar/access_right/c_abf2Helmick, C.G., Felson, D.T., Lawrence, R.C., Gabriel, S., Hirsch, R., Kwoh, C.K., Estimates of the prevalence of arthritis and other rheumatic conditions in the United States. Part I (2008) Arthritis Rheum, 58 (1), pp. 15-25. , 18163481instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURArticleFemaleFemaleHumansUn-explained visual lossSilicone oilVitrectomyRetinal detachmentMüller cellsNeuronal apoptosisPotassiumIdentification of a Sjögren's syndrome susceptibility locus at OAS1 that influences isoform switching, protein expression, and responsiveness to type I interferonsarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Li, HeReksten, Tove RagnaIce, John A.Kelly, Jennifer A.Adrianto, IndraRasmussen, AstridWang, ShaofengHe, BoGrundahl, Kiely M.Glenn, Stuart B.Miceli-Richard, CorinneBowman, SimonLester, SueEriksson, PerEloranta, Maija-LeenaBrun, Johan G.Gøransson, Lasse G.Harboe, ErnaGuthridge, Joel M.Kaufman, Kenneth M.Kvarnström, MarikaCunninghame Graham, Deborah S.Patel, KetanAdler, Adam J.Farris, A. DariseBrennan, Michael T.Chodosh, JamesGopalakrishnan, RajaramWeisman, Michael H.Venuturupalli, SwamyWallace, Daniel J.Hefner, Kimberly S.Houston, Glen D.Huang, Andrew J. W.Hughes, Pamela J.Lewis, David M.Radfar, LidaVista, Evan S.Contessa E., EdgarRohrer, Michael D.Stone, Donald U.Vyse, Timothy J.Harley, John B.Gaffney, Patrick M.James, Judith A.Turner, SeanAlevizos, IliasAnaya, Juan-ManuelRhodus, Nelson L.Segal, Barbara M.Montgomery, Courtney G.Scofield, R. HalKovats, SusanMariette, XavierRönnblom, LarsWitte, TorstenRischmueller, MaureenWahren-Herlenius, MarieOmdal, RoaldJonsson, RolandNg, Wan-FaiNordmark, GunnelLessard, Christopher J.Sivils, Kathy L.Li, HeReksten, Tove RagnaIce, John A.Kelly, Jennifer A.Adrianto, IndraRasmussen, AstridWang, ShaofengHe, BoGrundahl, Kiely M.Glenn, Stuart B.Miceli-Richard, CorinneBowman, SimonLester, SueEriksson, PerEloranta, Maija-LeenaBrun, Johan G.Gøransson, Lasse G.Harboe, ErnaKaufman, Kenneth M.Kvarnström, MarikaCunninghame Graham, Deborah S.Patel, KetanAdler, Adam J.Farris, A. DariseBrennan, Michael T.Chodosh, JamesGopalakrishnan, RajaramWeisman, Michael H.Venuturupalli, SwamyWallace, Daniel J.Hefner, Kimberly S.Houston, Glen D.Huang, Andrew J. W.Hughes, Pamela J.Lewis, David M.Radfar, LidaVista, Evan S.ORIGINAL51.pdfapplication/pdf9235242https://repository.urosario.edu.co/bitstreams/8bfdb4f8-a60c-4ae6-9af7-cca0327c7909/download49d677b064547ba5a16b3bb6942e0638MD51TEXT51.pdf.txt51.pdf.txtExtracted texttext/plain110238https://repository.urosario.edu.co/bitstreams/85fe9c43-37ac-4383-9848-ed68f9e06e7e/download6d8e60baabcd1e344e96059706a4bb16MD52THUMBNAIL51.pdf.jpg51.pdf.jpgGenerated Thumbnailimage/jpeg4820https://repository.urosario.edu.co/bitstreams/4eef1d06-04c2-401d-a325-0566acd8ca9e/download1a0b2886b00d9c098b1f26c9e387f2dbMD5310336/18812oai:repository.urosario.edu.co:10336/188122020-05-12 05:41:26.595https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006820https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |