Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2013
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/8816
- Acceso en línea:
- https://doi.org/10.1371/journal.pone.0079731
http://repository.urosario.edu.co/handle/10336/8816
- Palabra clave:
- Evolución & genética
Aanálisis filogenético
Genética
Genes
Alternative splicing
Genetic loci
Gorillas; Monkeys
Phylogenetic analysis
Primates
Protein sequencing
Sequence alignment
- Rights
- License
- Abierto (Texto completo)
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dc.title.spa.fl_str_mv |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
title |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
spellingShingle |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey Evolución & genética Aanálisis filogenético Genética Genes Alternative splicing Genetic loci Gorillas; Monkeys Phylogenetic analysis Primates Protein sequencing Sequence alignment |
title_short |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
title_full |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
title_fullStr |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
title_full_unstemmed |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
title_sort |
Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey |
dc.subject.ddc.none.fl_str_mv |
Evolución & genética |
topic |
Evolución & genética Aanálisis filogenético Genética Genes Alternative splicing Genetic loci Gorillas; Monkeys Phylogenetic analysis Primates Protein sequencing Sequence alignment |
dc.subject.decs.spa.fl_str_mv |
Aanálisis filogenético Genética Genes |
dc.subject.keyword.eng.fl_str_mv |
Alternative splicing Genetic loci Gorillas; Monkeys Phylogenetic analysis Primates Protein sequencing Sequence alignment |
description |
Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as KIR4DL and transcripts predicted to encode a D0+D1 configuration (AOTVOKIR2DL1*01v1) which appear to be unique in the Aotus genus. Furthermore, alternative splicing was found as a likely mechanism for producing activator receptors in A. vociferans species. KIR proteins from New World monkeys may be split into three new lineages according to domain by domain phylogenetic analysis. Although the A. vociferans KIR family displayed a high divergence among paralogous genes, individual loci were limited in their genetic polymorphism. Selection analysis showed that both constrained and rapid evolution may operate within the AvKIR family. The frequent alternative splicing (as a likely mechanism generating activator receptors), the presence of KIR4DL and KIR2DL1 (D0+D1) molecules and other data reported here suggest that the KIR family in Aotus has had a rapid evolution, independent from its Catarrhini counterparts.from its Catarrhini counterparts. |
publishDate |
2013 |
dc.date.created.none.fl_str_mv |
2013-11-06 |
dc.date.issued.none.fl_str_mv |
2013 |
dc.date.accessioned.none.fl_str_mv |
2014-08-12T19:10:37Z |
dc.date.available.none.fl_str_mv |
2014-08-12T19:10:37Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1371/journal.pone.0079731 |
dc.identifier.issn.none.fl_str_mv |
1932-6203 |
dc.identifier.uri.none.fl_str_mv |
http://repository.urosario.edu.co/handle/10336/8816 |
url |
https://doi.org/10.1371/journal.pone.0079731 http://repository.urosario.edu.co/handle/10336/8816 |
identifier_str_mv |
1932-6203 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 11 |
dc.relation.citationTitle.none.fl_str_mv |
PLOS ONE |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 8 |
dc.relation.ispartof.spa.fl_str_mv |
PLOS ONE, ISSN 1932-6203, V. 8 N. 11 Nov, 2013 |
dc.relation.uri.none.fl_str_mv |
http://www.ncbi.nlm.nih.gov.ez.urosario.edu.co/pmc/articles/PMC3819253/pdf/pone.0079731.pdf |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto completo) |
rights_invalid_str_mv |
Abierto (Texto completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.medium.spa.fl_str_mv |
Recurso electrónico |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.format.tipo.spa.fl_str_mv |
Documento |
dc.publisher.spa.fl_str_mv |
Universidad del Rosario |
institution |
Universidad del Rosario |
dc.source.instname.spa.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
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Comunidad Rosarista95c152d3-7555-4637-8c25-73f601f1e266b60981a3-87aa-4da4-bf7d-3a8f8763d711a9524704-c54f-4bc2-ab89-fffd5be08b1d9e3ba9df-fe89-48fe-9521-cc8f452d56f5796530652014-08-12T19:10:37Z2014-08-12T19:10:37Z2013-11-062013Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as KIR4DL and transcripts predicted to encode a D0+D1 configuration (AOTVOKIR2DL1*01v1) which appear to be unique in the Aotus genus. Furthermore, alternative splicing was found as a likely mechanism for producing activator receptors in A. vociferans species. KIR proteins from New World monkeys may be split into three new lineages according to domain by domain phylogenetic analysis. Although the A. vociferans KIR family displayed a high divergence among paralogous genes, individual loci were limited in their genetic polymorphism. Selection analysis showed that both constrained and rapid evolution may operate within the AvKIR family. The frequent alternative splicing (as a likely mechanism generating activator receptors), the presence of KIR4DL and KIR2DL1 (D0+D1) molecules and other data reported here suggest that the KIR family in Aotus has had a rapid evolution, independent from its Catarrhini counterparts.from its Catarrhini counterparts.Recurso electrónicoapplication/pdfDocumentohttps://doi.org/10.1371/journal.pone.00797311932-6203http://repository.urosario.edu.co/handle/10336/8816engUniversidad del RosarioNo. 11PLOS ONEVol. 8PLOS ONE, ISSN 1932-6203, V. 8 N. 11 Nov, 2013http://www.ncbi.nlm.nih.gov.ez.urosario.edu.co/pmc/articles/PMC3819253/pdf/pone.0079731.pdfAbierto (Texto completo)EL AUTOR, manifiesta que la obra objeto de la presente autorización es original y la realizó sin violar o usurpar derechos de autor de terceros, por lo tanto la obra es de exclusiva autoría y tiene la titularidad sobre la misma.http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocUREvolución & genética575600Aanálisis filogenéticoGenéticaGenesAlternative splicingGenetic lociGorillas; MonkeysPhylogenetic analysisPrimatesProtein sequencingSequence alignmentIdentification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World MonkeyarticleArtículohttp://purl.org/coar/resource_type/c_6501Garzón-Ospina, DiegoLópez, CarolinaCadavid, LuisPatarroyo, Manuel ElkinPatarroyo, Manuel A.Garzón-Ospina, DiegoLópez, CarolinaCadavid, Luis F.Patarroyo, Manuel E.Patarroyo, Manuel A.ORIGINALIdentification and Diversity.pdfIdentification and Diversity.pdfapplication/pdf3738169https://repository.urosario.edu.co/bitstreams/36cd74e3-0723-4d08-91cb-af0c760e1697/download9491ab84b589120812f8514f428e6ca6MD51LICENSElicense.txtlicense.txttext/plain2156https://repository.urosario.edu.co/bitstreams/f18a7dbc-ce16-435d-bfa7-108e9792276a/downloadb4f8fe66e94b897ab4c355bac005ad16MD52TEXTIdentification and Diversity.pdf.txtIdentification and Diversity.pdf.txtExtracted texttext/plain62917https://repository.urosario.edu.co/bitstreams/90b80d50-7f83-4b37-ae98-8c959c91f6b6/download0b64b1a693e2a257b1ce24c93823fb51MD59THUMBNAILIdentification and Diversity.pdf.jpgIdentification and Diversity.pdf.jpgGenerated Thumbnailimage/jpeg4834https://repository.urosario.edu.co/bitstreams/99db1f31-4418-477b-b4bd-b9e195179983/download319b1fd8346c51246870367665c91327MD51010336/8816oai:repository.urosario.edu.co:10336/88162022-08-27 11:42:04.605https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.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 |