Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey

Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as...

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Tipo de recurso:
Fecha de publicación:
2013
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/8816
Acceso en línea:
https://doi.org/10.1371/journal.pone.0079731
http://repository.urosario.edu.co/handle/10336/8816
Palabra clave:
Evolución & genética
Aanálisis filogenético
Genética
Genes
Alternative splicing
Genetic loci
Gorillas; Monkeys
Phylogenetic analysis
Primates
Protein sequencing
Sequence alignment
Rights
License
Abierto (Texto completo)
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dc.title.spa.fl_str_mv Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
title Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
spellingShingle Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
Evolución & genética
Aanálisis filogenético
Genética
Genes
Alternative splicing
Genetic loci
Gorillas; Monkeys
Phylogenetic analysis
Primates
Protein sequencing
Sequence alignment
title_short Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
title_full Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
title_fullStr Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
title_full_unstemmed Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
title_sort Identification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World Monkey
dc.subject.ddc.none.fl_str_mv Evolución & genética
topic Evolución & genética
Aanálisis filogenético
Genética
Genes
Alternative splicing
Genetic loci
Gorillas; Monkeys
Phylogenetic analysis
Primates
Protein sequencing
Sequence alignment
dc.subject.decs.spa.fl_str_mv Aanálisis filogenético
Genética
Genes
dc.subject.keyword.eng.fl_str_mv Alternative splicing
Genetic loci
Gorillas; Monkeys
Phylogenetic analysis
Primates
Protein sequencing
Sequence alignment
description Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as KIR4DL and transcripts predicted to encode a D0+D1 configuration (AOTVOKIR2DL1*01v1) which appear to be unique in the Aotus genus. Furthermore, alternative splicing was found as a likely mechanism for producing activator receptors in A. vociferans species. KIR proteins from New World monkeys may be split into three new lineages according to domain by domain phylogenetic analysis. Although the A. vociferans KIR family displayed a high divergence among paralogous genes, individual loci were limited in their genetic polymorphism. Selection analysis showed that both constrained and rapid evolution may operate within the AvKIR family. The frequent alternative splicing (as a likely mechanism generating activator receptors), the presence of KIR4DL and KIR2DL1 (D0+D1) molecules and other data reported here suggest that the KIR family in Aotus has had a rapid evolution, independent from its Catarrhini counterparts.from its Catarrhini counterparts.
publishDate 2013
dc.date.created.none.fl_str_mv 2013-11-06
dc.date.issued.none.fl_str_mv 2013
dc.date.accessioned.none.fl_str_mv 2014-08-12T19:10:37Z
dc.date.available.none.fl_str_mv 2014-08-12T19:10:37Z
dc.type.eng.fl_str_mv article
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1371/journal.pone.0079731
dc.identifier.issn.none.fl_str_mv 1932-6203
dc.identifier.uri.none.fl_str_mv http://repository.urosario.edu.co/handle/10336/8816
url https://doi.org/10.1371/journal.pone.0079731
http://repository.urosario.edu.co/handle/10336/8816
identifier_str_mv 1932-6203
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 11
dc.relation.citationTitle.none.fl_str_mv PLOS ONE
dc.relation.citationVolume.none.fl_str_mv Vol. 8
dc.relation.ispartof.spa.fl_str_mv PLOS ONE, ISSN 1932-6203, V. 8 N. 11 Nov, 2013
dc.relation.uri.none.fl_str_mv http://www.ncbi.nlm.nih.gov.ez.urosario.edu.co/pmc/articles/PMC3819253/pdf/pone.0079731.pdf
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rights_invalid_str_mv Abierto (Texto completo)
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dc.format.medium.spa.fl_str_mv Recurso electrónico
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dc.format.tipo.spa.fl_str_mv Documento
dc.publisher.spa.fl_str_mv Universidad del Rosario
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
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spelling Comunidad Rosarista95c152d3-7555-4637-8c25-73f601f1e266b60981a3-87aa-4da4-bf7d-3a8f8763d711a9524704-c54f-4bc2-ab89-fffd5be08b1d9e3ba9df-fe89-48fe-9521-cc8f452d56f5796530652014-08-12T19:10:37Z2014-08-12T19:10:37Z2013-11-062013Previous BAC clone analysis of the Platyrrhini owl monkey KIRs have shown an unusual genetic structure in some loci. Therefore, cDNAs encoding KIR molecules from eleven Aotus vociferans monkeys were characterized here; tenputative KIR loci were found, some of which encoded atypical proteins such as KIR4DL and transcripts predicted to encode a D0+D1 configuration (AOTVOKIR2DL1*01v1) which appear to be unique in the Aotus genus. Furthermore, alternative splicing was found as a likely mechanism for producing activator receptors in A. vociferans species. KIR proteins from New World monkeys may be split into three new lineages according to domain by domain phylogenetic analysis. Although the A. vociferans KIR family displayed a high divergence among paralogous genes, individual loci were limited in their genetic polymorphism. Selection analysis showed that both constrained and rapid evolution may operate within the AvKIR family. The frequent alternative splicing (as a likely mechanism generating activator receptors), the presence of KIR4DL and KIR2DL1 (D0+D1) molecules and other data reported here suggest that the KIR family in Aotus has had a rapid evolution, independent from its Catarrhini counterparts.from its Catarrhini counterparts.Recurso electrónicoapplication/pdfDocumentohttps://doi.org/10.1371/journal.pone.00797311932-6203http://repository.urosario.edu.co/handle/10336/8816engUniversidad del RosarioNo. 11PLOS ONEVol. 8PLOS ONE, ISSN 1932-6203, V. 8 N. 11 Nov, 2013http://www.ncbi.nlm.nih.gov.ez.urosario.edu.co/pmc/articles/PMC3819253/pdf/pone.0079731.pdfAbierto (Texto completo)EL AUTOR, manifiesta que la obra objeto de la presente autorización es original y la realizó sin violar o usurpar derechos de autor de terceros, por lo tanto la obra es de exclusiva autoría y tiene la titularidad sobre la misma.http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocUREvolución & genética575600Aanálisis filogenéticoGenéticaGenesAlternative splicingGenetic lociGorillas; MonkeysPhylogenetic analysisPrimatesProtein sequencingSequence alignmentIdentification and Diversity of Killer Cell Ig-Like Receptors in Aotus vociferans, a New World MonkeyarticleArtículohttp://purl.org/coar/resource_type/c_6501Garzón-Ospina, DiegoLópez, CarolinaCadavid, LuisPatarroyo, Manuel ElkinPatarroyo, Manuel A.Garzón-Ospina, DiegoLópez, CarolinaCadavid, Luis F.Patarroyo, Manuel E.Patarroyo, Manuel A.ORIGINALIdentification and Diversity.pdfIdentification and Diversity.pdfapplication/pdf3738169https://repository.urosario.edu.co/bitstreams/36cd74e3-0723-4d08-91cb-af0c760e1697/download9491ab84b589120812f8514f428e6ca6MD51LICENSElicense.txtlicense.txttext/plain2156https://repository.urosario.edu.co/bitstreams/f18a7dbc-ce16-435d-bfa7-108e9792276a/downloadb4f8fe66e94b897ab4c355bac005ad16MD52TEXTIdentification and Diversity.pdf.txtIdentification and Diversity.pdf.txtExtracted texttext/plain62917https://repository.urosario.edu.co/bitstreams/90b80d50-7f83-4b37-ae98-8c959c91f6b6/download0b64b1a693e2a257b1ce24c93823fb51MD59THUMBNAILIdentification and Diversity.pdf.jpgIdentification and Diversity.pdf.jpgGenerated Thumbnailimage/jpeg4834https://repository.urosario.edu.co/bitstreams/99db1f31-4418-477b-b4bd-b9e195179983/download319b1fd8346c51246870367665c91327MD51010336/8816oai:repository.urosario.edu.co:10336/88162022-08-27 11:42:04.605https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.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