Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2014
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/21745
- Acceso en línea:
- https://doi.org/10.1186/1475-2875-13-388
https://repository.urosario.edu.co/handle/10336/21745
- Palabra clave:
- Plasmodium vivax
Enfermedades
Plasmodium vivax
6-Cys
pv41
s48/45 domains
Genetic variability
Malaria
Plasmodium vivax
- Rights
- License
- Abierto (Texto Completo)
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7f799a76-52d4-4b25-ac8a-2cd27a9a2ef56008906f9d9-7e5b-4e8d-b532-19eb42989ef2600796530656002020-04-23T14:01:32Z2020-04-23T14:01:32Z20142014Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P41 proteins have red blood cell binding regions in the s48/45 domains and are located on merozoite surface, P41 forming a heteroduplex with P12. These three genes have been identified in Plasmodium vivax and share similar characteristics with their orthologues in Plasmodium falciparum. Plasmodium vivax pv12 and pv38 have low genetic diversity but pv41 polymorphism has not been described.Results: Similarly to other members of the 6-Cys family, pv41 had low genetic polymorphism. pv41 3′-end displayed the highest nucleotide diversity value; several substitutions found there were under positive selection. Negatively selected codons at inter-species level were identified in the s48/45 domains; p41 would thus seem to have functional/structural constraints due to the presence of these domains.Methods. The present study was aimed at evaluating the P. vivax p41 (pv41) gene's polymorphism. DNA sequences from Colombian clinical isolates from pv41 gene were analysed for characterising and studying the genetic diversity and the evolutionary forces that produced the variation pattern so observed.Conclusions: In spite of the functional constraints of Pv41 s48/45 domains, immune system pressure seems to have allowed non-synonymous substitutions to become fixed within them as an adaptation mechanism; including Pv41 s48/45 domains in a vaccine should thus be carefully evaluated due to these domains containing some allele variants. © 2014Forero-Rodríguez et al.; licensee BioMed Central Ltd.application/pdfhttps://doi.org/10.1186/1475-2875-13-3881475-2875https://repository.urosario.edu.co/handle/10336/21745engNo. 1Malaria JournalVol. 13Malaria Journal, ISSN: 1475-2875 Vol. 13, No. 1 (2014)https://malariajournal.biomedcentral.com/track/pdf/10.1186/1475-2875-13-388Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURPlasmodium vivaxEnfermedades616600Plasmodium vivax6-Cyspv41s48/45 domainsGenetic variabilityMalariaPlasmodium vivaxLow genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite populationarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Forero Rodríguez, JohannaGarzón-Ospina, DiegoPatarroyo, Manuel A.Forero-Rodríguez, JohannaGarzón-Ospina, DiegoPatarroyo, Manuel A.ORIGINALLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdfapplication/pdf923759https://repository.urosario.edu.co/bitstreams/bc2ac067-51a7-4983-92fc-7655a9315f66/download86c5f4b0e4e518738e25cdc73fe7cc63MD51TEXTLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.txtLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.txtExtracted texttext/plain48987https://repository.urosario.edu.co/bitstreams/532d8d25-7620-4787-8556-e567bf4d0769/downloade8fe1cc16e0875f6fe1895748f5d3e20MD52THUMBNAILLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.jpgLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.jpgGenerated Thumbnailimage/jpeg4530https://repository.urosario.edu.co/bitstreams/3b9d72ee-8a81-4c3d-a82d-e830b5b9a3ae/downloadf65b7242b057fb337cd0e1ebb410ffbaMD5310336/21745oai:repository.urosario.edu.co:10336/217452020-05-13 14:48:47.979https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
title |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
spellingShingle |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population Plasmodium vivax Enfermedades Plasmodium vivax 6-Cys pv41 s48/45 domains Genetic variability Malaria Plasmodium vivax |
title_short |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
title_full |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
title_fullStr |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
title_full_unstemmed |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
title_sort |
Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population |
dc.subject.spa.fl_str_mv |
Plasmodium vivax |
topic |
Plasmodium vivax Enfermedades Plasmodium vivax 6-Cys pv41 s48/45 domains Genetic variability Malaria Plasmodium vivax |
dc.subject.ddc.spa.fl_str_mv |
Enfermedades |
dc.subject.keyword.spa.fl_str_mv |
Plasmodium vivax 6-Cys pv41 s48/45 domains Genetic variability |
dc.subject.lemb.spa.fl_str_mv |
Malaria Plasmodium vivax |
description |
Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P41 proteins have red blood cell binding regions in the s48/45 domains and are located on merozoite surface, P41 forming a heteroduplex with P12. These three genes have been identified in Plasmodium vivax and share similar characteristics with their orthologues in Plasmodium falciparum. Plasmodium vivax pv12 and pv38 have low genetic diversity but pv41 polymorphism has not been described.Results: Similarly to other members of the 6-Cys family, pv41 had low genetic polymorphism. pv41 3′-end displayed the highest nucleotide diversity value; several substitutions found there were under positive selection. Negatively selected codons at inter-species level were identified in the s48/45 domains; p41 would thus seem to have functional/structural constraints due to the presence of these domains.Methods. The present study was aimed at evaluating the P. vivax p41 (pv41) gene's polymorphism. DNA sequences from Colombian clinical isolates from pv41 gene were analysed for characterising and studying the genetic diversity and the evolutionary forces that produced the variation pattern so observed.Conclusions: In spite of the functional constraints of Pv41 s48/45 domains, immune system pressure seems to have allowed non-synonymous substitutions to become fixed within them as an adaptation mechanism; including Pv41 s48/45 domains in a vaccine should thus be carefully evaluated due to these domains containing some allele variants. © 2014Forero-Rodríguez et al.; licensee BioMed Central Ltd. |
publishDate |
2014 |
dc.date.created.none.fl_str_mv |
2014 |
dc.date.issued.none.fl_str_mv |
2014 |
dc.date.accessioned.none.fl_str_mv |
2020-04-23T14:01:32Z |
dc.date.available.none.fl_str_mv |
2020-04-23T14:01:32Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1186/1475-2875-13-388 |
dc.identifier.issn.none.fl_str_mv |
1475-2875 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/21745 |
url |
https://doi.org/10.1186/1475-2875-13-388 https://repository.urosario.edu.co/handle/10336/21745 |
identifier_str_mv |
1475-2875 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 1 |
dc.relation.citationTitle.none.fl_str_mv |
Malaria Journal |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 13 |
dc.relation.ispartof.spa.fl_str_mv |
Malaria Journal, ISSN: 1475-2875 Vol. 13, No. 1 (2014) |
dc.relation.uri.spa.fl_str_mv |
https://malariajournal.biomedcentral.com/track/pdf/10.1186/1475-2875-13-388 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
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application/pdf |
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Universidad del Rosario |
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