Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population

Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P...

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Tipo de recurso:
Fecha de publicación:
2014
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/21745
Acceso en línea:
https://doi.org/10.1186/1475-2875-13-388
https://repository.urosario.edu.co/handle/10336/21745
Palabra clave:
Plasmodium vivax
Enfermedades
Plasmodium vivax
6-Cys
pv41
s48/45 domains
Genetic variability
Malaria
Plasmodium vivax
Rights
License
Abierto (Texto Completo)
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repository_id_str
spelling 7f799a76-52d4-4b25-ac8a-2cd27a9a2ef56008906f9d9-7e5b-4e8d-b532-19eb42989ef2600796530656002020-04-23T14:01:32Z2020-04-23T14:01:32Z20142014Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P41 proteins have red blood cell binding regions in the s48/45 domains and are located on merozoite surface, P41 forming a heteroduplex with P12. These three genes have been identified in Plasmodium vivax and share similar characteristics with their orthologues in Plasmodium falciparum. Plasmodium vivax pv12 and pv38 have low genetic diversity but pv41 polymorphism has not been described.Results: Similarly to other members of the 6-Cys family, pv41 had low genetic polymorphism. pv41 3′-end displayed the highest nucleotide diversity value; several substitutions found there were under positive selection. Negatively selected codons at inter-species level were identified in the s48/45 domains; p41 would thus seem to have functional/structural constraints due to the presence of these domains.Methods. The present study was aimed at evaluating the P. vivax p41 (pv41) gene's polymorphism. DNA sequences from Colombian clinical isolates from pv41 gene were analysed for characterising and studying the genetic diversity and the evolutionary forces that produced the variation pattern so observed.Conclusions: In spite of the functional constraints of Pv41 s48/45 domains, immune system pressure seems to have allowed non-synonymous substitutions to become fixed within them as an adaptation mechanism; including Pv41 s48/45 domains in a vaccine should thus be carefully evaluated due to these domains containing some allele variants. © 2014Forero-Rodríguez et al.; licensee BioMed Central Ltd.application/pdfhttps://doi.org/10.1186/1475-2875-13-3881475-2875https://repository.urosario.edu.co/handle/10336/21745engNo. 1Malaria JournalVol. 13Malaria Journal, ISSN: 1475-2875 Vol. 13, No. 1 (2014)https://malariajournal.biomedcentral.com/track/pdf/10.1186/1475-2875-13-388Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURPlasmodium vivaxEnfermedades616600Plasmodium vivax6-Cyspv41s48/45 domainsGenetic variabilityMalariaPlasmodium vivaxLow genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite populationarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Forero Rodríguez, JohannaGarzón-Ospina, DiegoPatarroyo, Manuel A.Forero-Rodríguez, JohannaGarzón-Ospina, DiegoPatarroyo, Manuel A.ORIGINALLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdfapplication/pdf923759https://repository.urosario.edu.co/bitstreams/bc2ac067-51a7-4983-92fc-7655a9315f66/download86c5f4b0e4e518738e25cdc73fe7cc63MD51TEXTLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.txtLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.txtExtracted texttext/plain48987https://repository.urosario.edu.co/bitstreams/532d8d25-7620-4787-8556-e567bf4d0769/downloade8fe1cc16e0875f6fe1895748f5d3e20MD52THUMBNAILLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.jpgLow_genetic_diversity_in_the_locus_encoding_the_Plasmodium_vivax_P41.pdf.jpgGenerated Thumbnailimage/jpeg4530https://repository.urosario.edu.co/bitstreams/3b9d72ee-8a81-4c3d-a82d-e830b5b9a3ae/downloadf65b7242b057fb337cd0e1ebb410ffbaMD5310336/21745oai:repository.urosario.edu.co:10336/217452020-05-13 14:48:47.979https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
title Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
spellingShingle Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
Plasmodium vivax
Enfermedades
Plasmodium vivax
6-Cys
pv41
s48/45 domains
Genetic variability
Malaria
Plasmodium vivax
title_short Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
title_full Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
title_fullStr Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
title_full_unstemmed Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
title_sort Low genetic diversity in the locus encoding the Plasmodium vivax P41 protein in Colombia's parasite population
dc.subject.spa.fl_str_mv Plasmodium vivax
topic Plasmodium vivax
Enfermedades
Plasmodium vivax
6-Cys
pv41
s48/45 domains
Genetic variability
Malaria
Plasmodium vivax
dc.subject.ddc.spa.fl_str_mv Enfermedades
dc.subject.keyword.spa.fl_str_mv Plasmodium vivax
6-Cys
pv41
s48/45 domains
Genetic variability
dc.subject.lemb.spa.fl_str_mv Malaria
Plasmodium vivax
description Background: The development of malaria vaccine has been hindered by the allele-specific responses produced by some parasite antigens' high genetic diversity. Such antigen genetic diversity must thus be evaluated when designing a completely effective vaccine. Plasmodium falciparum P12, P38 and P41 proteins have red blood cell binding regions in the s48/45 domains and are located on merozoite surface, P41 forming a heteroduplex with P12. These three genes have been identified in Plasmodium vivax and share similar characteristics with their orthologues in Plasmodium falciparum. Plasmodium vivax pv12 and pv38 have low genetic diversity but pv41 polymorphism has not been described.Results: Similarly to other members of the 6-Cys family, pv41 had low genetic polymorphism. pv41 3′-end displayed the highest nucleotide diversity value; several substitutions found there were under positive selection. Negatively selected codons at inter-species level were identified in the s48/45 domains; p41 would thus seem to have functional/structural constraints due to the presence of these domains.Methods. The present study was aimed at evaluating the P. vivax p41 (pv41) gene's polymorphism. DNA sequences from Colombian clinical isolates from pv41 gene were analysed for characterising and studying the genetic diversity and the evolutionary forces that produced the variation pattern so observed.Conclusions: In spite of the functional constraints of Pv41 s48/45 domains, immune system pressure seems to have allowed non-synonymous substitutions to become fixed within them as an adaptation mechanism; including Pv41 s48/45 domains in a vaccine should thus be carefully evaluated due to these domains containing some allele variants. © 2014Forero-Rodríguez et al.; licensee BioMed Central Ltd.
publishDate 2014
dc.date.created.none.fl_str_mv 2014
dc.date.issued.none.fl_str_mv 2014
dc.date.accessioned.none.fl_str_mv 2020-04-23T14:01:32Z
dc.date.available.none.fl_str_mv 2020-04-23T14:01:32Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1186/1475-2875-13-388
dc.identifier.issn.none.fl_str_mv 1475-2875
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/21745
url https://doi.org/10.1186/1475-2875-13-388
https://repository.urosario.edu.co/handle/10336/21745
identifier_str_mv 1475-2875
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 1
dc.relation.citationTitle.none.fl_str_mv Malaria Journal
dc.relation.citationVolume.none.fl_str_mv Vol. 13
dc.relation.ispartof.spa.fl_str_mv Malaria Journal, ISSN: 1475-2875 Vol. 13, No. 1 (2014)
dc.relation.uri.spa.fl_str_mv https://malariajournal.biomedcentral.com/track/pdf/10.1186/1475-2875-13-388
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
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institution Universidad del Rosario
dc.source.instname.none.fl_str_mv instname:Universidad del Rosario
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