Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission ve...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2018
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/20382
- Acceso en línea:
- https://repository.urosario.edu.co/handle/10336/20382
- Palabra clave:
- Malaria Vaccine
Colombia
Crt O Gene
Dhfr Gene
Dhps Gene
Disease Surveillance
Electrophoresis
Endemic Disease
Gene
Gene Location
Gene Mutation
Gene Sequence
Genetic Association
Genetic Polymorphism
Genetic Resistance
Genetic Selection
Genetic Variability
Haplotype
Human
Malaria Control
Mdr1 Gene
Nonhuman
Nucleotide Sequence
Plasmodium Vivax
Plasmodium Vivax Malaria
Polymerase Chain Reaction
Vacuna contra la malaria
Crt O génica
Colombia
Enfermedades
Article
Malaria
Plasmodium
- Rights
- License
- Abierto (Texto Completo)
id |
EDOCUR2_7f495bf261e4ed573a772b6dec58df4d |
---|---|
oai_identifier_str |
oai:repository.urosario.edu.co:10336/20382 |
network_acronym_str |
EDOCUR2 |
network_name_str |
Repositorio EdocUR - U. Rosario |
repository_id_str |
|
spelling |
9eb6dc2d-6819-44b3-a3f9-9911009b349d600520513f1-39d7-4a27-9a06-72226b1e0f2d60051a7c31d-eaa0-4427-a9c7-0492550252c660025f772d6-6a9d-4ce1-80cd-57e3cced5c4a600912df468-abd3-4ef4-8a8b-0626685dca5860069a41a6a-f0e9-4d74-b49c-2f00c415b280600686eed19-5b75-4ddc-8906-a4da24529ebe6009e3ba9df-fe89-48fe-9521-cc8f452d56f5600796530656002019-10-03T12:35:49Z2019-10-03T12:35:49Z20182018Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods: Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion: pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. © 2018 The Author(s).application/pdf10.1186/s12936-018-2286-51475-2875https://repository.urosario.edu.co/handle/10336/20382engMalaria JournalVol. 17Malaria Journal, ISSN:1475-2875, Vol. 17 (2018)https://malariajournal.biomedcentral.com/articles/10.1186/s12936-018-2286-5Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2(2016) World Malaria Report 2016, , WHO World Health Organization Genevainstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURMalaria VaccineColombiaCrt O GeneDhfr GeneDhps GeneDisease SurveillanceElectrophoresisEndemic DiseaseGeneGene LocationGene MutationGene SequenceGenetic AssociationGenetic PolymorphismGenetic ResistanceGenetic SelectionGenetic VariabilityHaplotypeHumanMalaria ControlMdr1 GeneNonhumanNucleotide SequencePlasmodium VivaxPlasmodium Vivax MalariaPolymerase Chain ReactionVacuna contra la malariaCrt O génicaColombiaEnfermedades616600ArticleMalariaPlasmodiumSimultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian regionarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Cubides, Juan RicardoCamargo-Ayala, Paola AndreaNiño, Carlos HernandoGarzón‑Ospina, DiegoOrtega‑Ortegón, AnggieOspina‑Cantillo, EstefanyOrduz‑Durán, María FernandaPatarroyo, Manuel ElkinPatarroyo, Manuel A.Cubides, J.R., Camargo-Ayala, P.A., Niño, C.H., Garzón-Ospina, D., Ortega-Ortegón, A., Ospina-Cantillo, E., Orduz-Durán, M.F., Patarroyo, M.E., Patarroyo, M.A.ORIGINAL79.pdfapplication/pdf1202432https://repository.urosario.edu.co/bitstreams/620044b1-bc2d-4874-935e-0ff8cce664bc/download02b1e0b56caf6d02012ab7bbf2576ec3MD51TEXT79.pdf.txt79.pdf.txtExtracted texttext/plain42588https://repository.urosario.edu.co/bitstreams/12e5706f-f086-4158-850c-9d585b5c0c2e/downloade4e5c5e0194e58e4d4c0d2db2a723113MD52THUMBNAIL79.pdf.jpg79.pdf.jpgGenerated Thumbnailimage/jpeg4514https://repository.urosario.edu.co/bitstreams/b3dbc0d2-2984-44ae-98e0-30cee83da6a3/download885ebad41c2f9457bd254b4ddb9ef278MD5310336/20382oai:repository.urosario.edu.co:10336/203822020-02-12 16:20:45.803https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
spellingShingle |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region Malaria Vaccine Colombia Crt O Gene Dhfr Gene Dhps Gene Disease Surveillance Electrophoresis Endemic Disease Gene Gene Location Gene Mutation Gene Sequence Genetic Association Genetic Polymorphism Genetic Resistance Genetic Selection Genetic Variability Haplotype Human Malaria Control Mdr1 Gene Nonhuman Nucleotide Sequence Plasmodium Vivax Plasmodium Vivax Malaria Polymerase Chain Reaction Vacuna contra la malaria Crt O génica Colombia Enfermedades Article Malaria Plasmodium |
title_short |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_full |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_fullStr |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_full_unstemmed |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_sort |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
dc.subject.spa.fl_str_mv |
Malaria Vaccine Colombia Crt O Gene Dhfr Gene Dhps Gene Disease Surveillance Electrophoresis Endemic Disease Gene Gene Location Gene Mutation Gene Sequence Genetic Association Genetic Polymorphism Genetic Resistance Genetic Selection Genetic Variability Haplotype Human Malaria Control Mdr1 Gene Nonhuman Nucleotide Sequence Plasmodium Vivax Plasmodium Vivax Malaria Polymerase Chain Reaction Vacuna contra la malaria Crt O génica Colombia |
topic |
Malaria Vaccine Colombia Crt O Gene Dhfr Gene Dhps Gene Disease Surveillance Electrophoresis Endemic Disease Gene Gene Location Gene Mutation Gene Sequence Genetic Association Genetic Polymorphism Genetic Resistance Genetic Selection Genetic Variability Haplotype Human Malaria Control Mdr1 Gene Nonhuman Nucleotide Sequence Plasmodium Vivax Plasmodium Vivax Malaria Polymerase Chain Reaction Vacuna contra la malaria Crt O génica Colombia Enfermedades Article Malaria Plasmodium |
dc.subject.ddc.spa.fl_str_mv |
Enfermedades |
dc.subject.keyword.spa.fl_str_mv |
Article |
dc.subject.lemb.spa.fl_str_mv |
Malaria Plasmodium |
description |
Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods: Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion: pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. © 2018 The Author(s). |
publishDate |
2018 |
dc.date.created.none.fl_str_mv |
2018 |
dc.date.issued.none.fl_str_mv |
2018 |
dc.date.accessioned.none.fl_str_mv |
2019-10-03T12:35:49Z |
dc.date.available.none.fl_str_mv |
2019-10-03T12:35:49Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
10.1186/s12936-018-2286-5 |
dc.identifier.issn.none.fl_str_mv |
1475-2875 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/20382 |
identifier_str_mv |
10.1186/s12936-018-2286-5 1475-2875 |
url |
https://repository.urosario.edu.co/handle/10336/20382 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationTitle.none.fl_str_mv |
Malaria Journal |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 17 |
dc.relation.ispartof.spa.fl_str_mv |
Malaria Journal, ISSN:1475-2875, Vol. 17 (2018) |
dc.relation.uri.spa.fl_str_mv |
https://malariajournal.biomedcentral.com/articles/10.1186/s12936-018-2286-5 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
institution |
Universidad del Rosario |
dc.source.bibliographicCitation.spa.fl_str_mv |
(2016) World Malaria Report 2016, , WHO World Health Organization Geneva |
dc.source.instname.none.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.none.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
bitstream.url.fl_str_mv |
https://repository.urosario.edu.co/bitstreams/620044b1-bc2d-4874-935e-0ff8cce664bc/download https://repository.urosario.edu.co/bitstreams/12e5706f-f086-4158-850c-9d585b5c0c2e/download https://repository.urosario.edu.co/bitstreams/b3dbc0d2-2984-44ae-98e0-30cee83da6a3/download |
bitstream.checksum.fl_str_mv |
02b1e0b56caf6d02012ab7bbf2576ec3 e4e5c5e0194e58e4d4c0d2db2a723113 885ebad41c2f9457bd254b4ddb9ef278 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167534499266560 |