Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region

Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission ve...

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Tipo de recurso:
Fecha de publicación:
2018
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/20382
Acceso en línea:
https://repository.urosario.edu.co/handle/10336/20382
Palabra clave:
Malaria Vaccine
Colombia
Crt O Gene
Dhfr Gene
Dhps Gene
Disease Surveillance
Electrophoresis
Endemic Disease
Gene
Gene Location
Gene Mutation
Gene Sequence
Genetic Association
Genetic Polymorphism
Genetic Resistance
Genetic Selection
Genetic Variability
Haplotype
Human
Malaria Control
Mdr1 Gene
Nonhuman
Nucleotide Sequence
Plasmodium Vivax
Plasmodium Vivax Malaria
Polymerase Chain Reaction
Vacuna contra la malaria
Crt O génica
Colombia
Enfermedades
Article
Malaria
Plasmodium
Rights
License
Abierto (Texto Completo)
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spelling 9eb6dc2d-6819-44b3-a3f9-9911009b349d600520513f1-39d7-4a27-9a06-72226b1e0f2d60051a7c31d-eaa0-4427-a9c7-0492550252c660025f772d6-6a9d-4ce1-80cd-57e3cced5c4a600912df468-abd3-4ef4-8a8b-0626685dca5860069a41a6a-f0e9-4d74-b49c-2f00c415b280600686eed19-5b75-4ddc-8906-a4da24529ebe6009e3ba9df-fe89-48fe-9521-cc8f452d56f5600796530656002019-10-03T12:35:49Z2019-10-03T12:35:49Z20182018Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods: Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion: pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. © 2018 The Author(s).application/pdf10.1186/s12936-018-2286-51475-2875https://repository.urosario.edu.co/handle/10336/20382engMalaria JournalVol. 17Malaria Journal, ISSN:1475-2875, Vol. 17 (2018)https://malariajournal.biomedcentral.com/articles/10.1186/s12936-018-2286-5Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2(2016) World Malaria Report 2016, , WHO World Health Organization Genevainstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURMalaria VaccineColombiaCrt O GeneDhfr GeneDhps GeneDisease SurveillanceElectrophoresisEndemic DiseaseGeneGene LocationGene MutationGene SequenceGenetic AssociationGenetic PolymorphismGenetic ResistanceGenetic SelectionGenetic VariabilityHaplotypeHumanMalaria ControlMdr1 GeneNonhumanNucleotide SequencePlasmodium VivaxPlasmodium Vivax MalariaPolymerase Chain ReactionVacuna contra la malariaCrt O génicaColombiaEnfermedades616600ArticleMalariaPlasmodiumSimultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian regionarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Cubides, Juan RicardoCamargo-Ayala, Paola AndreaNiño, Carlos HernandoGarzón‑Ospina, DiegoOrtega‑Ortegón, AnggieOspina‑Cantillo, EstefanyOrduz‑Durán, María FernandaPatarroyo, Manuel ElkinPatarroyo, Manuel A.Cubides, J.R., Camargo-Ayala, P.A., Niño, C.H., Garzón-Ospina, D., Ortega-Ortegón, A., Ospina-Cantillo, E., Orduz-Durán, M.F., Patarroyo, M.E., Patarroyo, M.A.ORIGINAL79.pdfapplication/pdf1202432https://repository.urosario.edu.co/bitstreams/620044b1-bc2d-4874-935e-0ff8cce664bc/download02b1e0b56caf6d02012ab7bbf2576ec3MD51TEXT79.pdf.txt79.pdf.txtExtracted texttext/plain42588https://repository.urosario.edu.co/bitstreams/12e5706f-f086-4158-850c-9d585b5c0c2e/downloade4e5c5e0194e58e4d4c0d2db2a723113MD52THUMBNAIL79.pdf.jpg79.pdf.jpgGenerated Thumbnailimage/jpeg4514https://repository.urosario.edu.co/bitstreams/b3dbc0d2-2984-44ae-98e0-30cee83da6a3/download885ebad41c2f9457bd254b4ddb9ef278MD5310336/20382oai:repository.urosario.edu.co:10336/203822020-02-12 16:20:45.803https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
title Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
spellingShingle Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
Malaria Vaccine
Colombia
Crt O Gene
Dhfr Gene
Dhps Gene
Disease Surveillance
Electrophoresis
Endemic Disease
Gene
Gene Location
Gene Mutation
Gene Sequence
Genetic Association
Genetic Polymorphism
Genetic Resistance
Genetic Selection
Genetic Variability
Haplotype
Human
Malaria Control
Mdr1 Gene
Nonhuman
Nucleotide Sequence
Plasmodium Vivax
Plasmodium Vivax Malaria
Polymerase Chain Reaction
Vacuna contra la malaria
Crt O génica
Colombia
Enfermedades
Article
Malaria
Plasmodium
title_short Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
title_full Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
title_fullStr Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
title_full_unstemmed Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
title_sort Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
dc.subject.spa.fl_str_mv Malaria Vaccine
Colombia
Crt O Gene
Dhfr Gene
Dhps Gene
Disease Surveillance
Electrophoresis
Endemic Disease
Gene
Gene Location
Gene Mutation
Gene Sequence
Genetic Association
Genetic Polymorphism
Genetic Resistance
Genetic Selection
Genetic Variability
Haplotype
Human
Malaria Control
Mdr1 Gene
Nonhuman
Nucleotide Sequence
Plasmodium Vivax
Plasmodium Vivax Malaria
Polymerase Chain Reaction
Vacuna contra la malaria
Crt O génica
Colombia
topic Malaria Vaccine
Colombia
Crt O Gene
Dhfr Gene
Dhps Gene
Disease Surveillance
Electrophoresis
Endemic Disease
Gene
Gene Location
Gene Mutation
Gene Sequence
Genetic Association
Genetic Polymorphism
Genetic Resistance
Genetic Selection
Genetic Variability
Haplotype
Human
Malaria Control
Mdr1 Gene
Nonhuman
Nucleotide Sequence
Plasmodium Vivax
Plasmodium Vivax Malaria
Polymerase Chain Reaction
Vacuna contra la malaria
Crt O génica
Colombia
Enfermedades
Article
Malaria
Plasmodium
dc.subject.ddc.spa.fl_str_mv Enfermedades
dc.subject.keyword.spa.fl_str_mv Article
dc.subject.lemb.spa.fl_str_mv Malaria
Plasmodium
description Background: Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods: Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion: pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. © 2018 The Author(s).
publishDate 2018
dc.date.created.none.fl_str_mv 2018
dc.date.issued.none.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2019-10-03T12:35:49Z
dc.date.available.none.fl_str_mv 2019-10-03T12:35:49Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv 10.1186/s12936-018-2286-5
dc.identifier.issn.none.fl_str_mv 1475-2875
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/20382
identifier_str_mv 10.1186/s12936-018-2286-5
1475-2875
url https://repository.urosario.edu.co/handle/10336/20382
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationTitle.none.fl_str_mv Malaria Journal
dc.relation.citationVolume.none.fl_str_mv Vol. 17
dc.relation.ispartof.spa.fl_str_mv Malaria Journal, ISSN:1475-2875, Vol. 17 (2018)
dc.relation.uri.spa.fl_str_mv https://malariajournal.biomedcentral.com/articles/10.1186/s12936-018-2286-5
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
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rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
institution Universidad del Rosario
dc.source.bibliographicCitation.spa.fl_str_mv (2016) World Malaria Report 2016, , WHO World Health Organization Geneva
dc.source.instname.none.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
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