Phytools: an R package for phylogenetic comparative biology (and other things)

Here, I present a new, multifunctional phylogenetics package, phytools, for the R statistical computing environment. 2. The focus of the package is on methods for phylogenetic comparative biology; however, it also includes tools for tree inference, phylogeny input/output, plotting, manipulation and...

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Autores:
Tipo de recurso:
Fecha de publicación:
2011
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/26733
Acceso en línea:
https://doi.org/10.1111/j.2041-210X.2011.00169.x
https://repository.urosario.edu.co/handle/10336/26733
Palabra clave:
Blogging
Computational biology
Evolution
Phylogeny
Statistics
Rights
License
Abierto (Texto Completo)
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repository_id_str
spelling f25cfa5c-68b5-4108-9437-477e6a782bb2-12020-08-19T14:40:08Z2020-08-19T14:40:08Z2011-12-15Here, I present a new, multifunctional phylogenetics package, phytools, for the R statistical computing environment. 2. The focus of the package is on methods for phylogenetic comparative biology; however, it also includes tools for tree inference, phylogeny input/output, plotting, manipulation and several other tasks. 3. I describe and tabulate the major methods implemented in phytools, and in addition provide some demonstration of its use in the form of two illustrative examples. 4. Finally, I conclude by briefly describing an active web?log that I use to document present and future developments for phytools. I also note other web resources for phylogenetics in the R computational environment.application/pdfhttps://doi.org/10.1111/j.2041-210X.2011.00169.xEISSN: 2041-210Xhttps://repository.urosario.edu.co/handle/10336/26733engBritish Ecological SocietyJohn Wiley & Sons223No. 2217Methods in Ecology and EvolutionVol. 3Methods in Ecology and Evolution, EISSN: 2041-210X, Vol.3, No.2 (April 2012); pp. 217-223https://besjournals.onlinelibrary.wiley.com/doi/epdf/10.1111/j.2041-210X.2011.00169.xAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Methods in Ecology and Evolutioninstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURBloggingComputational biologyEvolutionPhylogenyStatisticsPhytools: an R package for phylogenetic comparative biology (and other things)Phytools: un paquete R para biología comparativa filogenética (y otras cosas)articleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Revell, Liam James10336/26733oai:repository.urosario.edu.co:10336/267332022-05-02 07:37:13.338916https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Phytools: an R package for phylogenetic comparative biology (and other things)
dc.title.TranslatedTitle.spa.fl_str_mv Phytools: un paquete R para biología comparativa filogenética (y otras cosas)
title Phytools: an R package for phylogenetic comparative biology (and other things)
spellingShingle Phytools: an R package for phylogenetic comparative biology (and other things)
Blogging
Computational biology
Evolution
Phylogeny
Statistics
title_short Phytools: an R package for phylogenetic comparative biology (and other things)
title_full Phytools: an R package for phylogenetic comparative biology (and other things)
title_fullStr Phytools: an R package for phylogenetic comparative biology (and other things)
title_full_unstemmed Phytools: an R package for phylogenetic comparative biology (and other things)
title_sort Phytools: an R package for phylogenetic comparative biology (and other things)
dc.subject.keyword.spa.fl_str_mv Blogging
Computational biology
Evolution
Phylogeny
Statistics
topic Blogging
Computational biology
Evolution
Phylogeny
Statistics
description Here, I present a new, multifunctional phylogenetics package, phytools, for the R statistical computing environment. 2. The focus of the package is on methods for phylogenetic comparative biology; however, it also includes tools for tree inference, phylogeny input/output, plotting, manipulation and several other tasks. 3. I describe and tabulate the major methods implemented in phytools, and in addition provide some demonstration of its use in the form of two illustrative examples. 4. Finally, I conclude by briefly describing an active web?log that I use to document present and future developments for phytools. I also note other web resources for phylogenetics in the R computational environment.
publishDate 2011
dc.date.created.spa.fl_str_mv 2011-12-15
dc.date.accessioned.none.fl_str_mv 2020-08-19T14:40:08Z
dc.date.available.none.fl_str_mv 2020-08-19T14:40:08Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1111/j.2041-210X.2011.00169.x
dc.identifier.issn.none.fl_str_mv EISSN: 2041-210X
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/26733
url https://doi.org/10.1111/j.2041-210X.2011.00169.x
https://repository.urosario.edu.co/handle/10336/26733
identifier_str_mv EISSN: 2041-210X
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 223
dc.relation.citationIssue.none.fl_str_mv No. 2
dc.relation.citationStartPage.none.fl_str_mv 217
dc.relation.citationTitle.none.fl_str_mv Methods in Ecology and Evolution
dc.relation.citationVolume.none.fl_str_mv Vol. 3
dc.relation.ispartof.spa.fl_str_mv Methods in Ecology and Evolution, EISSN: 2041-210X, Vol.3, No.2 (April 2012); pp. 217-223
dc.relation.uri.spa.fl_str_mv https://besjournals.onlinelibrary.wiley.com/doi/epdf/10.1111/j.2041-210X.2011.00169.x
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv British Ecological Society
John Wiley & Sons
dc.source.spa.fl_str_mv Methods in Ecology and Evolution
institution Universidad del Rosario
dc.source.instname.none.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
_version_ 1814167428015325184

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