Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets

Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology...

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Fecha de publicación:
2023
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/42093
Acceso en línea:
https://repository.urosario.edu.co/handle/10336/42093
Palabra clave:
Histoplasmosis
Histoplasma capsulatum
Diagnosis
Real time PCR
FFPE tissues
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Attribution-NonCommercial-ShareAlike 4.0 International
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spelling 93976bf8-b717-4ca4-b2e4-82d89088903d2024-01-31T18:20:04Z2024-01-31T18:20:04Z2023-07-012023Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology but with some limitations. No molecular assays are commercially available and the results from different reports have been variable. We aimed to evaluate quantitative real-time PCR (qPCR) targeting three protein-coding genes of Histoplasma capsulatum (100-kDa, H and M antigens) for detection of this fungus in formalin-fixed paraffin-embedded (FFPE) samples from patients with proven histoplasmosis. The sensitivity of 100-kDa, H and M qPCR assays were 93.9%, 91% and 57%, respectively. The specificity of 100-kDa qPCR was 93% when compared against samples from patients with other mycoses and other infections, and 100% when samples from patients with non-infectious diseases were used as controls. Our findings demonstrate that real-time PCR assays targeting 100-kDa and H antigen showed the most reliable results and can be successfully used for diagnosing this mycosis when testing FFPE samples.application/pdf10.3390/jof90707002309-608Xhttps://repository.urosario.edu.co/handle/10336/42093engUniversidad del Rosariohttps://www.mdpi.com/2309-608X/9/7/700Attribution-NonCommercial-ShareAlike 4.0 InternationalAbierto (Texto Completo)https://creativecommons.org/licenses/by/4.0/http://purl.org/coar/access_right/c_abf2Journal of Fungiinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURHistoplasmosisHistoplasma capsulatumDiagnosisReal time PCRFFPE tissuesApplication of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular TargetsarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Caceres Contreras, Diego HernandoORIGINALApplication of Real Time.pdfapplication/pdf267900https://repository.urosario.edu.co/bitstreams/4b703335-29fc-4670-a51a-a1fbb0e26a3a/download77e14f003f7554308dd1fa06c077eafdMD51TEXTApplication of Real Time.pdf.txtApplication of Real Time.pdf.txtExtracted texttext/plain31221https://repository.urosario.edu.co/bitstreams/bbbb11f6-4cce-424e-a300-061815fde366/downloaded0290177b92be2253108298581a1effMD52THUMBNAILApplication of Real Time.pdf.jpgApplication of Real Time.pdf.jpgGenerated Thumbnailimage/jpeg4887https://repository.urosario.edu.co/bitstreams/f0913eff-c94c-4912-82fa-560ea901ea74/downloadc6d7478e909218b336e0ae9c2a0d7ef1MD5310336/42093oai:repository.urosario.edu.co:10336/420932024-02-01 03:00:46.054https://creativecommons.org/licenses/by/4.0/Attribution-NonCommercial-ShareAlike 4.0 Internationalhttps://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
title Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
spellingShingle Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
Histoplasmosis
Histoplasma capsulatum
Diagnosis
Real time PCR
FFPE tissues
title_short Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
title_full Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
title_fullStr Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
title_full_unstemmed Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
title_sort Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
dc.subject.spa.fl_str_mv Histoplasmosis
Histoplasma capsulatum
Diagnosis
Real time PCR
FFPE tissues
topic Histoplasmosis
Histoplasma capsulatum
Diagnosis
Real time PCR
FFPE tissues
description Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology but with some limitations. No molecular assays are commercially available and the results from different reports have been variable. We aimed to evaluate quantitative real-time PCR (qPCR) targeting three protein-coding genes of Histoplasma capsulatum (100-kDa, H and M antigens) for detection of this fungus in formalin-fixed paraffin-embedded (FFPE) samples from patients with proven histoplasmosis. The sensitivity of 100-kDa, H and M qPCR assays were 93.9%, 91% and 57%, respectively. The specificity of 100-kDa qPCR was 93% when compared against samples from patients with other mycoses and other infections, and 100% when samples from patients with non-infectious diseases were used as controls. Our findings demonstrate that real-time PCR assays targeting 100-kDa and H antigen showed the most reliable results and can be successfully used for diagnosing this mycosis when testing FFPE samples.
publishDate 2023
dc.date.created.spa.fl_str_mv 2023-07-01
dc.date.issued.spa.fl_str_mv 2023
dc.date.accessioned.none.fl_str_mv 2024-01-31T18:20:04Z
dc.date.available.none.fl_str_mv 2024-01-31T18:20:04Z
dc.type.spa.fl_str_mv article
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dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.spa.fl_str_mv 10.3390/jof9070700
dc.identifier.issn.spa.fl_str_mv 2309-608X
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/42093
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2309-608X
url https://repository.urosario.edu.co/handle/10336/42093
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language eng
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http://purl.org/coar/access_right/c_abf2
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dc.publisher.spa.fl_str_mv Universidad del Rosario
dc.source.spa.fl_str_mv Journal of Fungi
institution Universidad del Rosario
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