Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets
Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2023
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/42093
- Acceso en línea:
- https://repository.urosario.edu.co/handle/10336/42093
- Palabra clave:
- Histoplasmosis
Histoplasma capsulatum
Diagnosis
Real time PCR
FFPE tissues
- Rights
- License
- Attribution-NonCommercial-ShareAlike 4.0 International
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93976bf8-b717-4ca4-b2e4-82d89088903d2024-01-31T18:20:04Z2024-01-31T18:20:04Z2023-07-012023Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology but with some limitations. No molecular assays are commercially available and the results from different reports have been variable. We aimed to evaluate quantitative real-time PCR (qPCR) targeting three protein-coding genes of Histoplasma capsulatum (100-kDa, H and M antigens) for detection of this fungus in formalin-fixed paraffin-embedded (FFPE) samples from patients with proven histoplasmosis. The sensitivity of 100-kDa, H and M qPCR assays were 93.9%, 91% and 57%, respectively. The specificity of 100-kDa qPCR was 93% when compared against samples from patients with other mycoses and other infections, and 100% when samples from patients with non-infectious diseases were used as controls. Our findings demonstrate that real-time PCR assays targeting 100-kDa and H antigen showed the most reliable results and can be successfully used for diagnosing this mycosis when testing FFPE samples.application/pdf10.3390/jof90707002309-608Xhttps://repository.urosario.edu.co/handle/10336/42093engUniversidad del Rosariohttps://www.mdpi.com/2309-608X/9/7/700Attribution-NonCommercial-ShareAlike 4.0 InternationalAbierto (Texto Completo)https://creativecommons.org/licenses/by/4.0/http://purl.org/coar/access_right/c_abf2Journal of Fungiinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURHistoplasmosisHistoplasma capsulatumDiagnosisReal time PCRFFPE tissuesApplication of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular TargetsarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Caceres Contreras, Diego HernandoORIGINALApplication of Real Time.pdfapplication/pdf267900https://repository.urosario.edu.co/bitstreams/4b703335-29fc-4670-a51a-a1fbb0e26a3a/download77e14f003f7554308dd1fa06c077eafdMD51TEXTApplication of Real Time.pdf.txtApplication of Real Time.pdf.txtExtracted texttext/plain31221https://repository.urosario.edu.co/bitstreams/bbbb11f6-4cce-424e-a300-061815fde366/downloaded0290177b92be2253108298581a1effMD52THUMBNAILApplication of Real Time.pdf.jpgApplication of Real Time.pdf.jpgGenerated Thumbnailimage/jpeg4887https://repository.urosario.edu.co/bitstreams/f0913eff-c94c-4912-82fa-560ea901ea74/downloadc6d7478e909218b336e0ae9c2a0d7ef1MD5310336/42093oai:repository.urosario.edu.co:10336/420932024-02-01 03:00:46.054https://creativecommons.org/licenses/by/4.0/Attribution-NonCommercial-ShareAlike 4.0 Internationalhttps://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
title |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
spellingShingle |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets Histoplasmosis Histoplasma capsulatum Diagnosis Real time PCR FFPE tissues |
title_short |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
title_full |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
title_fullStr |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
title_full_unstemmed |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
title_sort |
Application of Real-Time PCR Assays for the Diagnosis of Histoplasmosis in Human FFPE Tissues Using Three Molecular Targets |
dc.subject.spa.fl_str_mv |
Histoplasmosis Histoplasma capsulatum Diagnosis Real time PCR FFPE tissues |
topic |
Histoplasmosis Histoplasma capsulatum Diagnosis Real time PCR FFPE tissues |
description |
Histoplasmosis is a fungal infection caused by the thermally dimorphic fungus Histoplasma capsulatum. This infection causes significant morbidity and mortality in people living with HIV/AIDS, especially in countries with limited resources. Currently used diagnostic tests rely on culture and serology but with some limitations. No molecular assays are commercially available and the results from different reports have been variable. We aimed to evaluate quantitative real-time PCR (qPCR) targeting three protein-coding genes of Histoplasma capsulatum (100-kDa, H and M antigens) for detection of this fungus in formalin-fixed paraffin-embedded (FFPE) samples from patients with proven histoplasmosis. The sensitivity of 100-kDa, H and M qPCR assays were 93.9%, 91% and 57%, respectively. The specificity of 100-kDa qPCR was 93% when compared against samples from patients with other mycoses and other infections, and 100% when samples from patients with non-infectious diseases were used as controls. Our findings demonstrate that real-time PCR assays targeting 100-kDa and H antigen showed the most reliable results and can be successfully used for diagnosing this mycosis when testing FFPE samples. |
publishDate |
2023 |
dc.date.created.spa.fl_str_mv |
2023-07-01 |
dc.date.issued.spa.fl_str_mv |
2023 |
dc.date.accessioned.none.fl_str_mv |
2024-01-31T18:20:04Z |
dc.date.available.none.fl_str_mv |
2024-01-31T18:20:04Z |
dc.type.spa.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.spa.fl_str_mv |
10.3390/jof9070700 |
dc.identifier.issn.spa.fl_str_mv |
2309-608X |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/42093 |
identifier_str_mv |
10.3390/jof9070700 2309-608X |
url |
https://repository.urosario.edu.co/handle/10336/42093 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.uri.spa.fl_str_mv |
https://www.mdpi.com/2309-608X/9/7/700 |
dc.rights.spa.fl_str_mv |
Attribution-NonCommercial-ShareAlike 4.0 International |
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http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
rights_invalid_str_mv |
Attribution-NonCommercial-ShareAlike 4.0 International Abierto (Texto Completo) https://creativecommons.org/licenses/by/4.0/ http://purl.org/coar/access_right/c_abf2 |
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application/pdf |
dc.publisher.spa.fl_str_mv |
Universidad del Rosario |
dc.source.spa.fl_str_mv |
Journal of Fungi |
institution |
Universidad del Rosario |
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instname:Universidad del Rosario |
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reponame:Repositorio Institucional EdocUR |
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