Recombination rate variation shapes barriers to introgression across butterfly genomes
Hybridisation and introgression can dramatically alter the relationships among groups of species, leading to phylogenetic discordance across the genome and between populations. Introgression can also erode species differences over time, but selection against introgression at certain loci acts to mai...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2019
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/22819
- Acceso en línea:
- https://doi.org/10.1371/journal.pbio.2006288
https://repository.urosario.edu.co/handle/10336/22819
- Palabra clave:
- Adult
Insect
Allele
Population
Genetic
Chromosome
Female
Genome
Human
Human experiment
Introgression
Major clinical study
Male
Natural selection
Nonhuman
Animal
Butterfly
Gene flow
Genetics
Insect chromosome
Insect genome
Population genetics
Species difference
Butterflies
Gene flow
Phylogeny
Recombination
Selection
Species specificity
Genetic recombination
Genetic selection
- Rights
- License
- Abierto (Texto Completo)
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ccf50b0a-1aea-457e-ab8e-b068befe242d0d02e9a7-b394-4b66-a9f4-d0282277493179873757600a4f04058-0f30-4170-bdb3-38b70c0218302020-05-25T23:58:11Z2020-05-25T23:58:11Z2019Hybridisation and introgression can dramatically alter the relationships among groups of species, leading to phylogenetic discordance across the genome and between populations. Introgression can also erode species differences over time, but selection against introgression at certain loci acts to maintain postmating species barriers. Theory predicts that species barriers made up of many loci throughout the genome should lead to a broad correlation between introgression and recombination rate, which determines the extent to which selection on deleterious foreign alleles will affect neutral alleles at physically linked loci. Here, we describe the variation in genealogical relationships across the genome among three species of Heliconius butterflies: H. melpomene (mel), H. cydno (cyd), and H. timareta (tim), using whole genomes of 92 individuals, and ask whether this variation can be explained by heterogeneous barriers to introgression. We find that species relationships vary predictably at the chromosomal scale. By quantifying recombination rate and admixture proportions, we then show that rates of introgression are predicted by variation in recombination rate. This implies that species barriers are highly polygenic, with selection acting against introgressed alleles across most of the genome. In addition, long chromosomes, which have lower recombination rates, produce stronger barriers on average than short chromosomes. Finally, we find a consistent difference between two species pairs on either side of the Andes, which suggests differences in the architecture of the species barriers. Our findings illustrate how the combined effects of hybridisation, recombination, and natural selection, acting at multitudes of loci over long periods, can dramatically sculpt the phylogenetic relationships among species. © 2019 Martin et al.application/pdfhttps://doi.org/10.1371/journal.pbio.20062881544917315457885https://repository.urosario.edu.co/handle/10336/22819engPublic Library of ScienceNo. 2PLoS BiologyVol. 17PLoS Biology, ISSN:15449173, 15457885, Vol.17, No.2 (2019)https://www.scopus.com/inward/record.uri?eid=2-s2.0-85061272706&doi=10.1371%2fjournal.pbio.2006288&partnerID=40&md5=1d1b61a6e1f40ebb4edb17af2595698cAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURAdultInsectAllelePopulationGeneticChromosomeFemaleGenomeHumanHuman experimentIntrogressionMajor clinical studyMaleNatural selectionNonhumanAnimalButterflyGene flowGeneticsInsect chromosomeInsect genomePopulation geneticsSpecies differenceButterfliesGene flowPhylogenyRecombinationSelectionSpecies specificityGenetic recombinationGenetic selectionRecombination rate variation shapes barriers to introgression across butterfly genomesarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Martin, Simon H.Davey, John W.Salazar, CamiloJiggins, Chris DORIGINALjournal-pbio-2006288.pdfapplication/pdf2940129https://repository.urosario.edu.co/bitstreams/9509b3d6-6109-4530-ac4f-b5f20ef1b46c/download52e1932c28abfa9a3f1016e67c517b42MD51TEXTjournal-pbio-2006288.pdf.txtjournal-pbio-2006288.pdf.txtExtracted texttext/plain111788https://repository.urosario.edu.co/bitstreams/e8d757bd-7717-4301-b9c1-43f9055ce543/downloadf3c065e6b10974eda7d3e626a6f60a8cMD52THUMBNAILjournal-pbio-2006288.pdf.jpgjournal-pbio-2006288.pdf.jpgGenerated Thumbnailimage/jpeg4336https://repository.urosario.edu.co/bitstreams/5a0aa219-3e8f-48d1-86bf-bb68d00bb893/downloade3af40dfded48fd232e1c35bc51c6e9bMD5310336/22819oai:repository.urosario.edu.co:10336/228192022-08-27 10:16:38.052https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
title |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
spellingShingle |
Recombination rate variation shapes barriers to introgression across butterfly genomes Adult Insect Allele Population Genetic Chromosome Female Genome Human Human experiment Introgression Major clinical study Male Natural selection Nonhuman Animal Butterfly Gene flow Genetics Insect chromosome Insect genome Population genetics Species difference Butterflies Gene flow Phylogeny Recombination Selection Species specificity Genetic recombination Genetic selection |
title_short |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
title_full |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
title_fullStr |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
title_full_unstemmed |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
title_sort |
Recombination rate variation shapes barriers to introgression across butterfly genomes |
dc.subject.keyword.eng.fl_str_mv |
Adult Insect Allele Population Genetic Chromosome Female Genome Human Human experiment Introgression Major clinical study Male Natural selection Nonhuman Animal Butterfly Gene flow Genetics Insect chromosome Insect genome Population genetics Species difference Butterflies Gene flow Phylogeny Recombination Selection Species specificity |
topic |
Adult Insect Allele Population Genetic Chromosome Female Genome Human Human experiment Introgression Major clinical study Male Natural selection Nonhuman Animal Butterfly Gene flow Genetics Insect chromosome Insect genome Population genetics Species difference Butterflies Gene flow Phylogeny Recombination Selection Species specificity Genetic recombination Genetic selection |
dc.subject.keyword.spa.fl_str_mv |
Genetic recombination Genetic selection |
description |
Hybridisation and introgression can dramatically alter the relationships among groups of species, leading to phylogenetic discordance across the genome and between populations. Introgression can also erode species differences over time, but selection against introgression at certain loci acts to maintain postmating species barriers. Theory predicts that species barriers made up of many loci throughout the genome should lead to a broad correlation between introgression and recombination rate, which determines the extent to which selection on deleterious foreign alleles will affect neutral alleles at physically linked loci. Here, we describe the variation in genealogical relationships across the genome among three species of Heliconius butterflies: H. melpomene (mel), H. cydno (cyd), and H. timareta (tim), using whole genomes of 92 individuals, and ask whether this variation can be explained by heterogeneous barriers to introgression. We find that species relationships vary predictably at the chromosomal scale. By quantifying recombination rate and admixture proportions, we then show that rates of introgression are predicted by variation in recombination rate. This implies that species barriers are highly polygenic, with selection acting against introgressed alleles across most of the genome. In addition, long chromosomes, which have lower recombination rates, produce stronger barriers on average than short chromosomes. Finally, we find a consistent difference between two species pairs on either side of the Andes, which suggests differences in the architecture of the species barriers. Our findings illustrate how the combined effects of hybridisation, recombination, and natural selection, acting at multitudes of loci over long periods, can dramatically sculpt the phylogenetic relationships among species. © 2019 Martin et al. |
publishDate |
2019 |
dc.date.created.spa.fl_str_mv |
2019 |
dc.date.accessioned.none.fl_str_mv |
2020-05-25T23:58:11Z |
dc.date.available.none.fl_str_mv |
2020-05-25T23:58:11Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1371/journal.pbio.2006288 |
dc.identifier.issn.none.fl_str_mv |
15449173 15457885 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/22819 |
url |
https://doi.org/10.1371/journal.pbio.2006288 https://repository.urosario.edu.co/handle/10336/22819 |
identifier_str_mv |
15449173 15457885 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 2 |
dc.relation.citationTitle.none.fl_str_mv |
PLoS Biology |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 17 |
dc.relation.ispartof.spa.fl_str_mv |
PLoS Biology, ISSN:15449173, 15457885, Vol.17, No.2 (2019) |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85061272706&doi=10.1371%2fjournal.pbio.2006288&partnerID=40&md5=1d1b61a6e1f40ebb4edb17af2595698c |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Public Library of Science |
institution |
Universidad del Rosario |
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instname:Universidad del Rosario |
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reponame:Repositorio Institucional EdocUR |
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