Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure

Background: The human condition known as Premature Ovarian Failure (POF) is characterized by loss of ovarian function before the age of 40. A majority of POF cases are sporadic, but 10–15% are familial, suggesting a genetic origin of the disease. Although several causal mutations have been identifie...

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Fecha de publicación:
2012
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/8769
Acceso en línea:
https://doi.org/10.1371/journal.pone.0033412
http://repository.urosario.edu.co/handle/10336/8769
Palabra clave:
Evolución & genética
Genoma humano
Genética
Cromosomas
Falla ovárica prematura
Genetic loci
Genotyping
Haplotypes
Homozygosity
Human families
Human genetics
Linkage analysis
Single nucleotide polymorphisms
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License
Abierto (Texto completo)
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dc.title.spa.fl_str_mv Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
title Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
spellingShingle Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
Evolución & genética
Genoma humano
Genética
Cromosomas
Falla ovárica prematura
Genetic loci
Genotyping
Haplotypes
Homozygosity
Human families
Human genetics
Linkage analysis
Single nucleotide polymorphisms
title_short Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
title_full Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
title_fullStr Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
title_full_unstemmed Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
title_sort Genome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian Failure
dc.subject.ddc.none.fl_str_mv Evolución & genética
topic Evolución & genética
Genoma humano
Genética
Cromosomas
Falla ovárica prematura
Genetic loci
Genotyping
Haplotypes
Homozygosity
Human families
Human genetics
Linkage analysis
Single nucleotide polymorphisms
dc.subject.decs.spa.fl_str_mv Genoma humano
Genética
Cromosomas
Falla ovárica prematura
dc.subject.keyword.eng.fl_str_mv Genetic loci
Genotyping
Haplotypes
Homozygosity
Human families
Human genetics
Linkage analysis
Single nucleotide polymorphisms
description Background: The human condition known as Premature Ovarian Failure (POF) is characterized by loss of ovarian function before the age of 40. A majority of POF cases are sporadic, but 10–15% are familial, suggesting a genetic origin of the disease. Although several causal mutations have been identified, the etiology of POF is still unknown for about 90% of the patients. Methodology/Principal Findings: We report a genome-wide linkage and homozygosity analysis in one large consanguineous Middle-Eastern POF-affected family presenting an autosomal recessive pattern of inheritance. We identified two regions with a LODmax of 3.26 on chromosome 7p21.1-15.3 and 7q21.3-22.2, which are supported as candidate regions by homozygosity mapping. Sequencing of the coding exons and known regulatory sequences of three candidate genes (DLX5, DLX6 and DSS1) included within the largest region did not reveal any causal mutations. Conclusions/Significance: We detect two novel POF-associated loci on human chromosome 7, opening the way to the identification of new genes involved in the control of ovarian development and function.
publishDate 2012
dc.date.created.none.fl_str_mv 2012-03-13
dc.date.issued.none.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2014-08-11T16:43:32Z
dc.date.available.none.fl_str_mv 2014-08-11T16:43:32Z
dc.type.eng.fl_str_mv article
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1371/journal.pone.0033412
dc.identifier.issn.none.fl_str_mv 1932-6203
dc.identifier.uri.none.fl_str_mv http://repository.urosario.edu.co/handle/10336/8769
url https://doi.org/10.1371/journal.pone.0033412
http://repository.urosario.edu.co/handle/10336/8769
identifier_str_mv 1932-6203
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 3
dc.relation.citationTitle.none.fl_str_mv PLOS ONE
dc.relation.citationVolume.none.fl_str_mv Vol. 7
dc.relation.ispartof.spa.fl_str_mv PLOS ONE, ISSN 1932-6203, V. 7 N. 3 Mar, 2012
dc.relation.uri.none.fl_str_mv https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0033412
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto completo)
rights_invalid_str_mv Abierto (Texto completo)
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dc.format.medium.spa.fl_str_mv Recurso electrónico
dc.format.mimetype.none.fl_str_mv application/pdf
dc.format.tipo.spa.fl_str_mv Documento
dc.publisher.spa.fl_str_mv Universidad del Rosario
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
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spelling Comunidad Rosaristaab181b9e-623f-4061-a662-81d1ea1cb11b60035e36aff-52fe-4073-b613-559e6e1b71d76007f5de902-848f-4adf-8fc1-9601b7e57601600fd4e74b7-6cdc-4b07-a112-df8d66afa1ca600156546d2-8570-4a40-95d7-a73ad6755682600e32b8657-34d6-4f46-bce1-1ffed7f60675600502e523f-9970-4368-9daa-a34cab82a37a60079782770600b124231d-1849-42d5-b910-4d165637dc98600eedba8ae-0c47-4b86-b4b9-a40fe7e9ec46600060cd606-a1b2-4ff3-8204-0b5b56af77506007c015e82-e481-44d6-b535-d0146b451c3a600edd7614a-49ec-4a5f-b1f1-a1778a5fa7f1600f28d10b9-5542-4581-813f-9c55fbd801fe6002014-08-11T16:43:32Z2014-08-11T16:43:32Z2012-03-132012Background: The human condition known as Premature Ovarian Failure (POF) is characterized by loss of ovarian function before the age of 40. A majority of POF cases are sporadic, but 10–15% are familial, suggesting a genetic origin of the disease. Although several causal mutations have been identified, the etiology of POF is still unknown for about 90% of the patients. Methodology/Principal Findings: We report a genome-wide linkage and homozygosity analysis in one large consanguineous Middle-Eastern POF-affected family presenting an autosomal recessive pattern of inheritance. We identified two regions with a LODmax of 3.26 on chromosome 7p21.1-15.3 and 7q21.3-22.2, which are supported as candidate regions by homozygosity mapping. Sequencing of the coding exons and known regulatory sequences of three candidate genes (DLX5, DLX6 and DSS1) included within the largest region did not reveal any causal mutations. Conclusions/Significance: We detect two novel POF-associated loci on human chromosome 7, opening the way to the identification of new genes involved in the control of ovarian development and function.Recurso electrónicoapplication/pdfDocumentohttps://doi.org/10.1371/journal.pone.00334121932-6203http://repository.urosario.edu.co/handle/10336/8769engUniversidad del RosarioNo. 3PLOS ONEVol. 7PLOS ONE, ISSN 1932-6203, V. 7 N. 3 Mar, 2012https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0033412Abierto (Texto completo)EL AUTOR, manifiesta que la obra objeto de la presente autorización es original y la realizó sin violar o usurpar derechos de autor de terceros, por lo tanto la obra es de exclusiva autoría y tiene la titularidad sobre la misma.http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocUREvolución & genética575600Genoma humanoGenéticaCromosomasFalla ovárica prematuraGenetic lociGenotypingHaplotypesHomozygosityHuman familiesHuman geneticsLinkage analysisSingle nucleotide polymorphismsGenome-Wide Linkage in a Highly Consanguineous Pedigree Reveals Two Novel Loci on Chromosome 7 for Non-Syndromic Familial Premature Ovarian FailurearticleArtículohttp://purl.org/coar/resource_type/c_6501Caburet, SandrineZavadakova, PetraBen-Neriah, ZivaBouhali, KamalDipietromaria, AurélieCharon, CélineBesse, CélineLaissue, PaulChalifa-Caspi, VeredChristin-Maitre, SophieVaiman, DanielLevi, GiovanniVeitia, ReinerFellous, MarcCaburet, SandrineZavadakova, PetraBen-Neriah, ZivaBouhali, KamalDipietromaria, AurélieCharon, CélineBesse, CélineLaissue, PaulChalifa-Caspi, VeredChristin-Maitre, SophieVaiman, DanielLevi, GiovanniVeitia, Reiner A.Fellous, 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