Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users

Co-infections with HIV and HCV are very frequent among people who inject drugs (PWID). However, very few studies comparatively reconstructed the transmission patterns of both viruses in the same population. We have recruited 117 co-infected PWID during a recent HIV outbreak in Romania. Phylogenetic...

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Autores:
Tipo de recurso:
Fecha de publicación:
2017
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/22825
Acceso en línea:
https://doi.org/10.1371/journal.pone.0185866
https://repository.urosario.edu.co/handle/10336/22825
Palabra clave:
Article
Controlled study
Drug dependence
Epidemic
Genotype
Hepatitis C
Human
Human immunodeficiency virus
Human immunodeficiency virus infection
Major clinical study
Mixed infection
Molecular clock
Nucleotide sequence
Phylogeny
Prison
Romania
Romanian (citizen)
Virus transmission
Adult
Coinfection
Drug use
Female
Genetics
Hepacivirus
Hepatitis C
HIV Infections
Male
Pathogenicity
Transmission
Virology
Adult
Coinfection
Disease Outbreaks
Drug Users
Female
Genotype
Hepacivirus
Hepatitis C
HIV
HIV Infections
Humans
Male
Phylogeny
Romania
Rights
License
Abierto (Texto Completo)
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dc.title.spa.fl_str_mv Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
title Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
spellingShingle Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
Article
Controlled study
Drug dependence
Epidemic
Genotype
Hepatitis C
Human
Human immunodeficiency virus
Human immunodeficiency virus infection
Major clinical study
Mixed infection
Molecular clock
Nucleotide sequence
Phylogeny
Prison
Romania
Romanian (citizen)
Virus transmission
Adult
Coinfection
Drug use
Female
Genetics
Hepacivirus
Hepatitis C
HIV Infections
Male
Pathogenicity
Transmission
Virology
Adult
Coinfection
Disease Outbreaks
Drug Users
Female
Genotype
Hepacivirus
Hepatitis C
HIV
HIV Infections
Humans
Male
Phylogeny
Romania
title_short Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
title_full Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
title_fullStr Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
title_full_unstemmed Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
title_sort Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
dc.subject.keyword.spa.fl_str_mv Article
Controlled study
Drug dependence
Epidemic
Genotype
Hepatitis C
Human
Human immunodeficiency virus
Human immunodeficiency virus infection
Major clinical study
Mixed infection
Molecular clock
Nucleotide sequence
Phylogeny
Prison
Romania
Romanian (citizen)
Virus transmission
Adult
Coinfection
Drug use
Female
Genetics
Hepacivirus
Hepatitis C
HIV Infections
Male
Pathogenicity
Transmission
Virology
Adult
Coinfection
Disease Outbreaks
Drug Users
Female
Genotype
Hepacivirus
Hepatitis C
HIV
HIV Infections
Humans
Male
Phylogeny
Romania
topic Article
Controlled study
Drug dependence
Epidemic
Genotype
Hepatitis C
Human
Human immunodeficiency virus
Human immunodeficiency virus infection
Major clinical study
Mixed infection
Molecular clock
Nucleotide sequence
Phylogeny
Prison
Romania
Romanian (citizen)
Virus transmission
Adult
Coinfection
Drug use
Female
Genetics
Hepacivirus
Hepatitis C
HIV Infections
Male
Pathogenicity
Transmission
Virology
Adult
Coinfection
Disease Outbreaks
Drug Users
Female
Genotype
Hepacivirus
Hepatitis C
HIV
HIV Infections
Humans
Male
Phylogeny
Romania
description Co-infections with HIV and HCV are very frequent among people who inject drugs (PWID). However, very few studies comparatively reconstructed the transmission patterns of both viruses in the same population. We have recruited 117 co-infected PWID during a recent HIV outbreak in Romania. Phylogenetic analyses were performed on HIV and HCV sequences in order to characterize and compare transmission dynamics of the two viruses. Three large HIV clusters (2 subtype F1 and one CRF14_BG) and thirteen smaller HCV transmission networks (genotypes 1a, 1b, 3a, 4a and 4d) were identified. Eighty (65%) patients were both in HIV and HCV transmission chains and 70 of those shared the same HIV and HCV cluster with at least one other patient. Molecular clock analysis indicated that all identified HIV clusters originated around 2006, while the origin of the different HCV clusters ranged between 1980 (genotype 1b) and 2011 (genotypes 3a and 4d). HCV infection preceded HIV infection in 80.3% of cases. Coincidental transmission of HIV and HCV was estimated to be rather low (19.65%) and associated with an outbreak among PWID during detention in the same penitentiary. This study has reconstructed and compared the dispersion of these two viruses in a PWID population. © 2017 Paraschiv et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
publishDate 2017
dc.date.created.spa.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2020-05-25T23:58:14Z
dc.date.available.none.fl_str_mv 2020-05-25T23:58:14Z
dc.type.eng.fl_str_mv article
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dc.identifier.doi.none.fl_str_mv https://doi.org/10.1371/journal.pone.0185866
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dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/22825
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https://repository.urosario.edu.co/handle/10336/22825
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spelling 2f4a4cdc-8393-4fbc-8bd5-eff134c3b788-1c0fcdb29-839f-4687-8b3d-66658dcc7fee-19f14cded-3d1d-4f17-9198-2537a69b52c3-1d7282fe0-dfd6-429d-9dfa-5e3f49e231d6-10b0d2231-db03-47cb-b107-8b0e03fbdd3d-1e0b1b35c-3287-4aa8-b197-1709bb1d282e-19b02898b-c882-467c-81df-625db337b206-1fccbef2a-d710-4b64-a586-8aec0da2ef1b-13e778b3f-bc0a-419c-ae38-69fc8ebdb53d-1138d54f6-bf1d-454c-b349-39e187694657-122ccc596-fd94-4bac-b23f-1102a1fe0d9c-115108f8f-3415-4062-9bde-d5f12b97db91-1a033810b-23ba-47e2-895b-e666ffb6a285-12020-05-25T23:58:14Z2020-05-25T23:58:14Z2017Co-infections with HIV and HCV are very frequent among people who inject drugs (PWID). However, very few studies comparatively reconstructed the transmission patterns of both viruses in the same population. We have recruited 117 co-infected PWID during a recent HIV outbreak in Romania. Phylogenetic analyses were performed on HIV and HCV sequences in order to characterize and compare transmission dynamics of the two viruses. Three large HIV clusters (2 subtype F1 and one CRF14_BG) and thirteen smaller HCV transmission networks (genotypes 1a, 1b, 3a, 4a and 4d) were identified. Eighty (65%) patients were both in HIV and HCV transmission chains and 70 of those shared the same HIV and HCV cluster with at least one other patient. Molecular clock analysis indicated that all identified HIV clusters originated around 2006, while the origin of the different HCV clusters ranged between 1980 (genotype 1b) and 2011 (genotypes 3a and 4d). HCV infection preceded HIV infection in 80.3% of cases. Coincidental transmission of HIV and HCV was estimated to be rather low (19.65%) and associated with an outbreak among PWID during detention in the same penitentiary. This study has reconstructed and compared the dispersion of these two viruses in a PWID population. © 2017 Paraschiv et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.application/pdfhttps://doi.org/10.1371/journal.pone.018586619326203https://repository.urosario.edu.co/handle/10336/22825engPublic Library of ScienceNo. 10PLoS ONEVol. 12PLoS ONE, ISSN:19326203, Vol.12, No.10 (2017)https://www.scopus.com/inward/record.uri?eid=2-s2.0-85031014330&doi=10.1371%2fjournal.pone.0185866&partnerID=40&md5=5cc32df4804c1ddc68b54146020fb7c9Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURArticleControlled studyDrug dependenceEpidemicGenotypeHepatitis CHumanHuman immunodeficiency virusHuman immunodeficiency virus infectionMajor clinical studyMixed infectionMolecular clockNucleotide sequencePhylogenyPrisonRomaniaRomanian (citizen)Virus transmissionAdultCoinfectionDrug useFemaleGeneticsHepacivirusHepatitis CHIV InfectionsMalePathogenicityTransmissionVirologyAdultCoinfectionDisease OutbreaksDrug UsersFemaleGenotypeHepacivirusHepatitis CHIVHIV InfectionsHumansMalePhylogenyRomaniaEpidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug usersarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Paraschiv, SimonaBanica, LeontinaNicolae, IoneliaNiculescu, IuliaAbagiu, AdrianJipa, RalucaPineda-Peña, Andrea-ClemenciaPingarilho, MartaNeaga, EmilTheys, KristofLibin, PieterOtelea, DanAbecasis, AnaORIGINALjournal-pone-0185866.pdfapplication/pdf4705376https://repository.urosario.edu.co/bitstreams/6bd3b17e-198d-4ce2-a667-45bae33cb77c/downloadc72d9ac7ad91d24af021c79b018a3f31MD51TEXTjournal-pone-0185866.pdf.txtjournal-pone-0185866.pdf.txtExtracted texttext/plain54604https://repository.urosario.edu.co/bitstreams/36f1991e-e1d4-41b0-a75c-32de45791a46/download37aaad5d9e3f18d1e8dc30ac16d5f384MD52THUMBNAILjournal-pone-0185866.pdf.jpgjournal-pone-0185866.pdf.jpgGenerated Thumbnailimage/jpeg4404https://repository.urosario.edu.co/bitstreams/615c735e-f97f-4182-a796-b9a0bf192ff2/download22dd113c8f0b64544f222e3ea2a8df8dMD5310336/22825oai:repository.urosario.edu.co:10336/228252022-05-02 07:37:20.667046https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co