New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study

Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomia...

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Autores:
Tipo de recurso:
Fecha de publicación:
2015
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/23564
Acceso en línea:
https://doi.org/10.1186/s12879-015-0840-0
https://repository.urosario.edu.co/handle/10336/23564
Palabra clave:
Caspofungin
Echinocandin
Antifungal agent
Echinocandin
Adult
Antifungal susceptibility
Article
Candida albicans
Candida glabrata
Candida parapsilosis
Candida tropicalis
Candidiasis
Child
Colombia
Controlled study
Female
Fks1 gene
Fungal gene
Fungal strain
Hospital infection
Human
Infection rate
Infection risk
Major clinical study
Male
Mortality
Nonhuman
Observational study
Outcome assessment
Pichia kudriavzevii
Practice guideline
Prediction
Survival rate
Tertiary care center
Adolescent
Aged
Candidiasis
Cross infection
Drug effects
Infant
Intensive care unit
Microbial sensitivity test
Microbiology
Middle aged
Newborn
Preschool child
Procedures
Risk factor
Statistics and numerical data
Very elderly
Young adult
Adolescent
Adult
Aged
Aged, 80 and over
Antifungal agents
Candida albicans
Candidiasis
Child
Colombia
Cross infection
Echinocandins
Female
Humans
Infant
Intensive care units
Male
Microbial sensitivity tests
Middle aged
Risk factors
Tertiary care centers
Young adult
Candida albicans
Echinocandins
Nosocomial infection
Resistance
Susceptibility
newborn
preschool
Child
Infant
Rights
License
Abierto (Texto Completo)
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dc.title.spa.fl_str_mv New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
title New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
spellingShingle New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
Caspofungin
Echinocandin
Antifungal agent
Echinocandin
Adult
Antifungal susceptibility
Article
Candida albicans
Candida glabrata
Candida parapsilosis
Candida tropicalis
Candidiasis
Child
Colombia
Controlled study
Female
Fks1 gene
Fungal gene
Fungal strain
Hospital infection
Human
Infection rate
Infection risk
Major clinical study
Male
Mortality
Nonhuman
Observational study
Outcome assessment
Pichia kudriavzevii
Practice guideline
Prediction
Survival rate
Tertiary care center
Adolescent
Aged
Candidiasis
Cross infection
Drug effects
Infant
Intensive care unit
Microbial sensitivity test
Microbiology
Middle aged
Newborn
Preschool child
Procedures
Risk factor
Statistics and numerical data
Very elderly
Young adult
Adolescent
Adult
Aged
Aged, 80 and over
Antifungal agents
Candida albicans
Candidiasis
Child
Colombia
Cross infection
Echinocandins
Female
Humans
Infant
Intensive care units
Male
Microbial sensitivity tests
Middle aged
Risk factors
Tertiary care centers
Young adult
Candida albicans
Echinocandins
Nosocomial infection
Resistance
Susceptibility
newborn
preschool
Child
Infant
title_short New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
title_full New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
title_fullStr New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
title_full_unstemmed New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
title_sort New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
dc.subject.keyword.spa.fl_str_mv Caspofungin
Echinocandin
Antifungal agent
Echinocandin
Adult
Antifungal susceptibility
Article
Candida albicans
Candida glabrata
Candida parapsilosis
Candida tropicalis
Candidiasis
Child
Colombia
Controlled study
Female
Fks1 gene
Fungal gene
Fungal strain
Hospital infection
Human
Infection rate
Infection risk
Major clinical study
Male
Mortality
Nonhuman
Observational study
Outcome assessment
Pichia kudriavzevii
Practice guideline
Prediction
Survival rate
Tertiary care center
Adolescent
Aged
Candidiasis
Cross infection
Drug effects
Infant
Intensive care unit
Microbial sensitivity test
Microbiology
Middle aged
Newborn
Preschool child
Procedures
Risk factor
Statistics and numerical data
Very elderly
Young adult
Adolescent
Adult
Aged
Aged, 80 and over
Antifungal agents
Candida albicans
Candidiasis
Child
Colombia
Cross infection
Echinocandins
Female
Humans
Infant
Intensive care units
Male
Microbial sensitivity tests
Middle aged
Risk factors
Tertiary care centers
Young adult
Candida albicans
Echinocandins
Nosocomial infection
Resistance
Susceptibility
topic Caspofungin
Echinocandin
Antifungal agent
Echinocandin
Adult
Antifungal susceptibility
Article
Candida albicans
Candida glabrata
Candida parapsilosis
Candida tropicalis
Candidiasis
Child
Colombia
Controlled study
Female
Fks1 gene
Fungal gene
Fungal strain
Hospital infection
Human
Infection rate
Infection risk
Major clinical study
Male
Mortality
Nonhuman
Observational study
Outcome assessment
Pichia kudriavzevii
Practice guideline
Prediction
Survival rate
Tertiary care center
Adolescent
Aged
Candidiasis
Cross infection
Drug effects
Infant
Intensive care unit
Microbial sensitivity test
Microbiology
Middle aged
Newborn
Preschool child
Procedures
Risk factor
Statistics and numerical data
Very elderly
Young adult
Adolescent
Adult
Aged
Aged, 80 and over
Antifungal agents
Candida albicans
Candidiasis
Child
Colombia
Cross infection
Echinocandins
Female
Humans
Infant
Intensive care units
Male
Microbial sensitivity tests
Middle aged
Risk factors
Tertiary care centers
Young adult
Candida albicans
Echinocandins
Nosocomial infection
Resistance
Susceptibility
newborn
preschool
Child
Infant
dc.subject.keyword.eng.fl_str_mv newborn
preschool
Child
Infant
description Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomial Candida albicans infection in ten tertiary care hospitals using the methodology proposed by CLSI M27-A3 and CLSI M27-S4, and its association with risk factors and clinical outcome. The approach involved descriptive research concerning the diagnosis of nosocomial infection during a 7-month period in 10 hospitals in Bogotá, Colombia. Associations were established using exact non-parametric statistical tests having a high statistical power (>95%), suitable for small samples. The exact Mann Whitney test or Kruskall-Wallis non-parametric ANOVA tests were used for distributions which were different to normal or ordinal variables when comparing three or more groups. Multivariate analysis involved using binomial, multinomial and ordinal exact logistical regression models (hierarchical) and discrimination power was evaluated using area under the ROC curve. Results: 101 nosocomial infections were found in 82,967 discharges, for a Candida spp. infection rate of 12.2 per 10,000 discharges, 30.7% caused by C. albicans, 22.8% by C. tropicalis, 20.8% by C. parapsilosis, 19.8% by other Candida, 3% by C. krusei and 3% by C. glabrata. Statistically significant associations between mortality rate and the absence of parenteral nutrition were found in multivariate analysis (OR = 39.746: 1.794-880.593 95% CI: p = 0.020). The model's predictive power was 83.9%, having an 85.9% significant prediction area (69.5%-100 95% CI; p = 0.001). Conclusions: Significant differences were found regarding susceptibility results when comparing CLSI M27-A3 to CLSI M27-S4 when shifting clinical break-point values. However, one nosocomial strain was consistent in having reduced susceptibility when using both guidelines without having been directly exposed to echinocandins beforehand and no mutations were found in the FKS1 gene for hot spot 1 and/or hot spot 2 regions, thereby highlighting selective pressure regarding widespread antifungal use in tertiary healthcare centres. Nutritional conditions and low family income were seen to have a negative effect on survival rates. © 2015 Rodríguez-Leguizamón et al.; licensee BioMed Central.
publishDate 2015
dc.date.created.spa.fl_str_mv 2015
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:03:08Z
dc.date.available.none.fl_str_mv 2020-05-26T00:03:08Z
dc.type.eng.fl_str_mv article
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dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1186/s12879-015-0840-0
dc.identifier.issn.none.fl_str_mv 14712334
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/23564
url https://doi.org/10.1186/s12879-015-0840-0
https://repository.urosario.edu.co/handle/10336/23564
identifier_str_mv 14712334
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 1
dc.relation.citationTitle.none.fl_str_mv BMC Infectious Diseases
dc.relation.citationVolume.none.fl_str_mv Vol. 15
dc.relation.ispartof.spa.fl_str_mv BMC Infectious Diseases, ISSN:14712334, Vol.15, No.1 (2015)
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institution Universidad del Rosario
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spelling 7951871360041391995600796530656001fadb4bf-bde3-409a-96e8-67a12ef63478-1e90d75da-7077-4260-932f-d69e2bf79d79-179457397600ceebb724-d9f8-4ad5-aaa2-a2d19d63cbdb-1f0658d4d-b978-4903-ac92-32d0e825e522-12020-05-26T00:03:08Z2020-05-26T00:03:08Z2015Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomial Candida albicans infection in ten tertiary care hospitals using the methodology proposed by CLSI M27-A3 and CLSI M27-S4, and its association with risk factors and clinical outcome. The approach involved descriptive research concerning the diagnosis of nosocomial infection during a 7-month period in 10 hospitals in Bogotá, Colombia. Associations were established using exact non-parametric statistical tests having a high statistical power (>95%), suitable for small samples. The exact Mann Whitney test or Kruskall-Wallis non-parametric ANOVA tests were used for distributions which were different to normal or ordinal variables when comparing three or more groups. Multivariate analysis involved using binomial, multinomial and ordinal exact logistical regression models (hierarchical) and discrimination power was evaluated using area under the ROC curve. Results: 101 nosocomial infections were found in 82,967 discharges, for a Candida spp. infection rate of 12.2 per 10,000 discharges, 30.7% caused by C. albicans, 22.8% by C. tropicalis, 20.8% by C. parapsilosis, 19.8% by other Candida, 3% by C. krusei and 3% by C. glabrata. Statistically significant associations between mortality rate and the absence of parenteral nutrition were found in multivariate analysis (OR = 39.746: 1.794-880.593 95% CI: p = 0.020). The model's predictive power was 83.9%, having an 85.9% significant prediction area (69.5%-100 95% CI; p = 0.001). Conclusions: Significant differences were found regarding susceptibility results when comparing CLSI M27-A3 to CLSI M27-S4 when shifting clinical break-point values. However, one nosocomial strain was consistent in having reduced susceptibility when using both guidelines without having been directly exposed to echinocandins beforehand and no mutations were found in the FKS1 gene for hot spot 1 and/or hot spot 2 regions, thereby highlighting selective pressure regarding widespread antifungal use in tertiary healthcare centres. Nutritional conditions and low family income were seen to have a negative effect on survival rates. © 2015 Rodríguez-Leguizamón et al.; licensee BioMed Central.application/pdfhttps://doi.org/10.1186/s12879-015-0840-014712334https://repository.urosario.edu.co/handle/10336/23564engBioMed Central Ltd.No. 1BMC Infectious DiseasesVol. 15BMC Infectious Diseases, ISSN:14712334, Vol.15, No.1 (2015)https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928713970&doi=10.1186%2fs12879-015-0840-0&partnerID=40&md5=b7652fcc2a7f6e3d8bbb2ff6eaefd083Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURCaspofunginEchinocandinAntifungal agentEchinocandinAdultAntifungal susceptibilityArticleCandida albicansCandida glabrataCandida parapsilosisCandida tropicalisCandidiasisChildColombiaControlled studyFemaleFks1 geneFungal geneFungal strainHospital infectionHumanInfection rateInfection riskMajor clinical studyMaleMortalityNonhumanObservational studyOutcome assessmentPichia kudriavzeviiPractice guidelinePredictionSurvival rateTertiary care centerAdolescentAgedCandidiasisCross infectionDrug effectsInfantIntensive care unitMicrobial sensitivity testMicrobiologyMiddle agedNewbornPreschool childProceduresRisk factorStatistics and numerical dataVery elderlyYoung adultAdolescentAdultAgedAged, 80 and overAntifungal agentsCandida albicansCandidiasisChildColombiaCross infectionEchinocandinsFemaleHumansInfantIntensive care unitsMaleMicrobial sensitivity testsMiddle agedRisk factorsTertiary care centersYoung adultCandida albicansEchinocandinsNosocomial infectionResistanceSusceptibilitynewbornpreschoolChildInfantNew echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational studyarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Rodriguez-Leguizamon, GiovanniGaona-Cifuentes, María AntoniaPatarroyo, Manuel A.Fiori, AlessandroLagrou, KatrienIbáñez Pinilla, MilcíadesVan Dijck, PatrickGómez-López, ArleyORIGINALs12879-015-0840-0.pdfapplication/pdf424862https://repository.urosario.edu.co/bitstreams/1a79be6d-6746-4c79-a27c-b30fd024a1ba/download7e3e926652bfe06ab022970f8eddec22MD51TEXTs12879-015-0840-0.pdf.txts12879-015-0840-0.pdf.txtExtracted texttext/plain40072https://repository.urosario.edu.co/bitstreams/15654de8-bef5-4282-a50c-1fb02f4067fb/downloada35c1c5e19725f8656bd16da1d01c455MD52THUMBNAILs12879-015-0840-0.pdf.jpgs12879-015-0840-0.pdf.jpgGenerated Thumbnailimage/jpeg4499https://repository.urosario.edu.co/bitstreams/3fc93faa-6e6b-41fa-932e-3b822181c164/download0c2aea86fbe1c6c73174b7455a0e3c82MD5310336/23564oai:repository.urosario.edu.co:10336/235642022-05-02 07:37:17.42269https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co