New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study
Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomia...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2015
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/23564
- Acceso en línea:
- https://doi.org/10.1186/s12879-015-0840-0
https://repository.urosario.edu.co/handle/10336/23564
- Palabra clave:
- Caspofungin
Echinocandin
Antifungal agent
Echinocandin
Adult
Antifungal susceptibility
Article
Candida albicans
Candida glabrata
Candida parapsilosis
Candida tropicalis
Candidiasis
Child
Colombia
Controlled study
Female
Fks1 gene
Fungal gene
Fungal strain
Hospital infection
Human
Infection rate
Infection risk
Major clinical study
Male
Mortality
Nonhuman
Observational study
Outcome assessment
Pichia kudriavzevii
Practice guideline
Prediction
Survival rate
Tertiary care center
Adolescent
Aged
Candidiasis
Cross infection
Drug effects
Infant
Intensive care unit
Microbial sensitivity test
Microbiology
Middle aged
Newborn
Preschool child
Procedures
Risk factor
Statistics and numerical data
Very elderly
Young adult
Adolescent
Adult
Aged
Aged, 80 and over
Antifungal agents
Candida albicans
Candidiasis
Child
Colombia
Cross infection
Echinocandins
Female
Humans
Infant
Intensive care units
Male
Microbial sensitivity tests
Middle aged
Risk factors
Tertiary care centers
Young adult
Candida albicans
Echinocandins
Nosocomial infection
Resistance
Susceptibility
newborn
preschool
Child
Infant
- Rights
- License
- Abierto (Texto Completo)
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dc.title.spa.fl_str_mv |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
title |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
spellingShingle |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study Caspofungin Echinocandin Antifungal agent Echinocandin Adult Antifungal susceptibility Article Candida albicans Candida glabrata Candida parapsilosis Candida tropicalis Candidiasis Child Colombia Controlled study Female Fks1 gene Fungal gene Fungal strain Hospital infection Human Infection rate Infection risk Major clinical study Male Mortality Nonhuman Observational study Outcome assessment Pichia kudriavzevii Practice guideline Prediction Survival rate Tertiary care center Adolescent Aged Candidiasis Cross infection Drug effects Infant Intensive care unit Microbial sensitivity test Microbiology Middle aged Newborn Preschool child Procedures Risk factor Statistics and numerical data Very elderly Young adult Adolescent Adult Aged Aged, 80 and over Antifungal agents Candida albicans Candidiasis Child Colombia Cross infection Echinocandins Female Humans Infant Intensive care units Male Microbial sensitivity tests Middle aged Risk factors Tertiary care centers Young adult Candida albicans Echinocandins Nosocomial infection Resistance Susceptibility newborn preschool Child Infant |
title_short |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
title_full |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
title_fullStr |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
title_full_unstemmed |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
title_sort |
New echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational study |
dc.subject.keyword.spa.fl_str_mv |
Caspofungin Echinocandin Antifungal agent Echinocandin Adult Antifungal susceptibility Article Candida albicans Candida glabrata Candida parapsilosis Candida tropicalis Candidiasis Child Colombia Controlled study Female Fks1 gene Fungal gene Fungal strain Hospital infection Human Infection rate Infection risk Major clinical study Male Mortality Nonhuman Observational study Outcome assessment Pichia kudriavzevii Practice guideline Prediction Survival rate Tertiary care center Adolescent Aged Candidiasis Cross infection Drug effects Infant Intensive care unit Microbial sensitivity test Microbiology Middle aged Newborn Preschool child Procedures Risk factor Statistics and numerical data Very elderly Young adult Adolescent Adult Aged Aged, 80 and over Antifungal agents Candida albicans Candidiasis Child Colombia Cross infection Echinocandins Female Humans Infant Intensive care units Male Microbial sensitivity tests Middle aged Risk factors Tertiary care centers Young adult Candida albicans Echinocandins Nosocomial infection Resistance Susceptibility |
topic |
Caspofungin Echinocandin Antifungal agent Echinocandin Adult Antifungal susceptibility Article Candida albicans Candida glabrata Candida parapsilosis Candida tropicalis Candidiasis Child Colombia Controlled study Female Fks1 gene Fungal gene Fungal strain Hospital infection Human Infection rate Infection risk Major clinical study Male Mortality Nonhuman Observational study Outcome assessment Pichia kudriavzevii Practice guideline Prediction Survival rate Tertiary care center Adolescent Aged Candidiasis Cross infection Drug effects Infant Intensive care unit Microbial sensitivity test Microbiology Middle aged Newborn Preschool child Procedures Risk factor Statistics and numerical data Very elderly Young adult Adolescent Adult Aged Aged, 80 and over Antifungal agents Candida albicans Candidiasis Child Colombia Cross infection Echinocandins Female Humans Infant Intensive care units Male Microbial sensitivity tests Middle aged Risk factors Tertiary care centers Young adult Candida albicans Echinocandins Nosocomial infection Resistance Susceptibility newborn preschool Child Infant |
dc.subject.keyword.eng.fl_str_mv |
newborn preschool Child Infant |
description |
Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomial Candida albicans infection in ten tertiary care hospitals using the methodology proposed by CLSI M27-A3 and CLSI M27-S4, and its association with risk factors and clinical outcome. The approach involved descriptive research concerning the diagnosis of nosocomial infection during a 7-month period in 10 hospitals in Bogotá, Colombia. Associations were established using exact non-parametric statistical tests having a high statistical power (>95%), suitable for small samples. The exact Mann Whitney test or Kruskall-Wallis non-parametric ANOVA tests were used for distributions which were different to normal or ordinal variables when comparing three or more groups. Multivariate analysis involved using binomial, multinomial and ordinal exact logistical regression models (hierarchical) and discrimination power was evaluated using area under the ROC curve. Results: 101 nosocomial infections were found in 82,967 discharges, for a Candida spp. infection rate of 12.2 per 10,000 discharges, 30.7% caused by C. albicans, 22.8% by C. tropicalis, 20.8% by C. parapsilosis, 19.8% by other Candida, 3% by C. krusei and 3% by C. glabrata. Statistically significant associations between mortality rate and the absence of parenteral nutrition were found in multivariate analysis (OR = 39.746: 1.794-880.593 95% CI: p = 0.020). The model's predictive power was 83.9%, having an 85.9% significant prediction area (69.5%-100 95% CI; p = 0.001). Conclusions: Significant differences were found regarding susceptibility results when comparing CLSI M27-A3 to CLSI M27-S4 when shifting clinical break-point values. However, one nosocomial strain was consistent in having reduced susceptibility when using both guidelines without having been directly exposed to echinocandins beforehand and no mutations were found in the FKS1 gene for hot spot 1 and/or hot spot 2 regions, thereby highlighting selective pressure regarding widespread antifungal use in tertiary healthcare centres. Nutritional conditions and low family income were seen to have a negative effect on survival rates. © 2015 Rodríguez-Leguizamón et al.; licensee BioMed Central. |
publishDate |
2015 |
dc.date.created.spa.fl_str_mv |
2015 |
dc.date.accessioned.none.fl_str_mv |
2020-05-26T00:03:08Z |
dc.date.available.none.fl_str_mv |
2020-05-26T00:03:08Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1186/s12879-015-0840-0 |
dc.identifier.issn.none.fl_str_mv |
14712334 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/23564 |
url |
https://doi.org/10.1186/s12879-015-0840-0 https://repository.urosario.edu.co/handle/10336/23564 |
identifier_str_mv |
14712334 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 1 |
dc.relation.citationTitle.none.fl_str_mv |
BMC Infectious Diseases |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 15 |
dc.relation.ispartof.spa.fl_str_mv |
BMC Infectious Diseases, ISSN:14712334, Vol.15, No.1 (2015) |
dc.relation.uri.spa.fl_str_mv |
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dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
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Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
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application/pdf |
dc.publisher.spa.fl_str_mv |
BioMed Central Ltd. |
institution |
Universidad del Rosario |
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instname:Universidad del Rosario |
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reponame:Repositorio Institucional EdocUR |
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7951871360041391995600796530656001fadb4bf-bde3-409a-96e8-67a12ef63478-1e90d75da-7077-4260-932f-d69e2bf79d79-179457397600ceebb724-d9f8-4ad5-aaa2-a2d19d63cbdb-1f0658d4d-b978-4903-ac92-32d0e825e522-12020-05-26T00:03:08Z2020-05-26T00:03:08Z2015Background: Candida albicans remains as the first cause of nosocomial fungal infections in hospitals worldwide and its susceptibility pattern should be better described in our tertiary care hospitals. Methods: This study aimed at identifying the caspofungin susceptibility pattern regarding nosocomial Candida albicans infection in ten tertiary care hospitals using the methodology proposed by CLSI M27-A3 and CLSI M27-S4, and its association with risk factors and clinical outcome. The approach involved descriptive research concerning the diagnosis of nosocomial infection during a 7-month period in 10 hospitals in Bogotá, Colombia. Associations were established using exact non-parametric statistical tests having a high statistical power (>95%), suitable for small samples. The exact Mann Whitney test or Kruskall-Wallis non-parametric ANOVA tests were used for distributions which were different to normal or ordinal variables when comparing three or more groups. Multivariate analysis involved using binomial, multinomial and ordinal exact logistical regression models (hierarchical) and discrimination power was evaluated using area under the ROC curve. Results: 101 nosocomial infections were found in 82,967 discharges, for a Candida spp. infection rate of 12.2 per 10,000 discharges, 30.7% caused by C. albicans, 22.8% by C. tropicalis, 20.8% by C. parapsilosis, 19.8% by other Candida, 3% by C. krusei and 3% by C. glabrata. Statistically significant associations between mortality rate and the absence of parenteral nutrition were found in multivariate analysis (OR = 39.746: 1.794-880.593 95% CI: p = 0.020). The model's predictive power was 83.9%, having an 85.9% significant prediction area (69.5%-100 95% CI; p = 0.001). Conclusions: Significant differences were found regarding susceptibility results when comparing CLSI M27-A3 to CLSI M27-S4 when shifting clinical break-point values. However, one nosocomial strain was consistent in having reduced susceptibility when using both guidelines without having been directly exposed to echinocandins beforehand and no mutations were found in the FKS1 gene for hot spot 1 and/or hot spot 2 regions, thereby highlighting selective pressure regarding widespread antifungal use in tertiary healthcare centres. Nutritional conditions and low family income were seen to have a negative effect on survival rates. © 2015 Rodríguez-Leguizamón et al.; licensee BioMed Central.application/pdfhttps://doi.org/10.1186/s12879-015-0840-014712334https://repository.urosario.edu.co/handle/10336/23564engBioMed Central Ltd.No. 1BMC Infectious DiseasesVol. 15BMC Infectious Diseases, ISSN:14712334, Vol.15, No.1 (2015)https://www.scopus.com/inward/record.uri?eid=2-s2.0-84928713970&doi=10.1186%2fs12879-015-0840-0&partnerID=40&md5=b7652fcc2a7f6e3d8bbb2ff6eaefd083Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURCaspofunginEchinocandinAntifungal agentEchinocandinAdultAntifungal susceptibilityArticleCandida albicansCandida glabrataCandida parapsilosisCandida tropicalisCandidiasisChildColombiaControlled studyFemaleFks1 geneFungal geneFungal strainHospital infectionHumanInfection rateInfection riskMajor clinical studyMaleMortalityNonhumanObservational studyOutcome assessmentPichia kudriavzeviiPractice guidelinePredictionSurvival rateTertiary care centerAdolescentAgedCandidiasisCross infectionDrug effectsInfantIntensive care unitMicrobial sensitivity testMicrobiologyMiddle agedNewbornPreschool childProceduresRisk factorStatistics and numerical dataVery elderlyYoung adultAdolescentAdultAgedAged, 80 and overAntifungal agentsCandida albicansCandidiasisChildColombiaCross infectionEchinocandinsFemaleHumansInfantIntensive care unitsMaleMicrobial sensitivity testsMiddle agedRisk factorsTertiary care centersYoung adultCandida albicansEchinocandinsNosocomial infectionResistanceSusceptibilitynewbornpreschoolChildInfantNew echinocandin susceptibility patterns for nosocomial Candida albicans in Bogotá, Colombia, in ten tertiary care centres: An observational studyarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Rodriguez-Leguizamon, GiovanniGaona-Cifuentes, María AntoniaPatarroyo, Manuel A.Fiori, AlessandroLagrou, KatrienIbáñez Pinilla, MilcíadesVan Dijck, PatrickGómez-López, ArleyORIGINALs12879-015-0840-0.pdfapplication/pdf424862https://repository.urosario.edu.co/bitstreams/1a79be6d-6746-4c79-a27c-b30fd024a1ba/download7e3e926652bfe06ab022970f8eddec22MD51TEXTs12879-015-0840-0.pdf.txts12879-015-0840-0.pdf.txtExtracted texttext/plain40072https://repository.urosario.edu.co/bitstreams/15654de8-bef5-4282-a50c-1fb02f4067fb/downloada35c1c5e19725f8656bd16da1d01c455MD52THUMBNAILs12879-015-0840-0.pdf.jpgs12879-015-0840-0.pdf.jpgGenerated Thumbnailimage/jpeg4499https://repository.urosario.edu.co/bitstreams/3fc93faa-6e6b-41fa-932e-3b822181c164/download0c2aea86fbe1c6c73174b7455a0e3c82MD5310336/23564oai:repository.urosario.edu.co:10336/235642022-05-02 07:37:17.42269https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |