The diagnostic performance of classical molecular tests used for detecting human papillomavirus
Cervical samples were evaluated for human papillomavirus (HPV) presence using the hybrid capture-2 (HC2) assay and the polymerase chain reaction (PCR) with three different primer sets (GP5+/6+, MY09/11 and pU1M/2R). PCR results were compared to HC2 and results of all assays were compared to cytologi...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2012
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/22494
- Acceso en línea:
- https://doi.org/10.1016/j.jviromet.2012.05.023
https://repository.urosario.edu.co/handle/10336/22494
- Palabra clave:
- Virus DNA
Abnormal laboratory result
Adolescent
Adult
Analytic method
Article
Cancer screening
Colposcopy
Controlled study
Disease course
Female
High risk population
Human
Human cell
Hybrid capture assay 2
Intermethod comparison
Nonhuman
Papanicolaou test
Polymerase chain reaction
Post test probability
Priority journal
Statistical parameters
Uterine cervix cancer
Uterine cervix cytology
Virus detection
Virus DNA cell DNA interaction
Wart virus
Adult
Cervix Uteri
Colposcopy
Cytological Techniques
Female
Humans
Molecular Diagnostic Techniques
Nucleic Acid Hybridization
Papillomaviridae
Papillomavirus Infections
Polymerase Chain Reaction
Prevalence
Sensitivity and Specificity
Virology
Young Adult
Human papillomavirus
Human papillomavirus
Hybrid capture assay 2
Polymerase chain reaction
Screening
Test performance
- Rights
- License
- Abierto (Texto Completo)
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5f0bfa81-3587-4e7d-9a77-20bc03da8208-1c67d367e-96c2-4566-8a39-374ead1a65f6-1c2710cd4-43c8-4225-9d8b-1d729ee41d9f-152249701-169762621-b985-4e26-8d05-2637a79c5e2f-10eff6f96-b77b-4b14-bd84-dcb058c80242-15035c581-9072-482a-896b-18709bf3db92-110ecd4f9-843f-4ef2-bec0-7d39d3381a13-179653065-12020-05-25T23:56:43Z2020-05-25T23:56:43Z2012Cervical samples were evaluated for human papillomavirus (HPV) presence using the hybrid capture-2 (HC2) assay and the polymerase chain reaction (PCR) with three different primer sets (GP5+/6+, MY09/11 and pU1M/2R). PCR results were compared to HC2 and results of all assays were compared to cytological and colposcopy findings. Post-test probability was assessed in individual assays and test combinations. HPV-DNA prevalence was 36.5% with HC2 and 55.2% with PCR. MY09/11 detected HPV-DNA in 38% of samples, GP5+/6+ in 19.1% and pU1M/2R in 16.4%. pU1M/2R and HC2 had the highest concordance (75.31%, k= 0.39 in the whole population; 74.1%, k= 0.5 in women with abnormal cytology). pU1M/2R had the best diagnostic performance, including optimal post-test probabilities and cervical abnormality detection (individually or in a panel of tests). Women positive for pU1M/2R may be at higher risk of disease progression; the assay performance when combined with a Pap smear in cervical cancer screening programs should be evaluated. © 2012 Elsevier B.V..application/pdfhttps://doi.org/10.1016/j.jviromet.2012.05.0231660934https://repository.urosario.edu.co/handle/10336/22494eng38No. 132Journal of Virological MethodsVol. 185Journal of Virological Methods, ISSN:1660934, Vol.185, No.1 (2012); pp. 32-38https://www.scopus.com/inward/record.uri?eid=2-s2.0-84864324188&doi=10.1016%2fj.jviromet.2012.05.023&partnerID=40&md5=3165ee74600132b05b1a42afc665f3c4Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURVirus DNAAbnormal laboratory resultAdolescentAdultAnalytic methodArticleCancer screeningColposcopyControlled studyDisease courseFemaleHigh risk populationHumanHuman cellHybrid capture assay 2Intermethod comparisonNonhumanPapanicolaou testPolymerase chain reactionPost test probabilityPriority journalStatistical parametersUterine cervix cancerUterine cervix cytologyVirus detectionVirus DNA cell DNA interactionWart virusAdultCervix UteriColposcopyCytological TechniquesFemaleHumansMolecular Diagnostic TechniquesNucleic Acid HybridizationPapillomaviridaePapillomavirus InfectionsPolymerase Chain ReactionPrevalenceSensitivity and SpecificityVirologyYoung AdultHuman papillomavirusHuman papillomavirusHybrid capture assay 2Polymerase chain reactionScreeningTest performanceThe diagnostic performance of classical molecular tests used for detecting human papillomavirusarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Munoz, MarinaCamargo, MilenaLeon, Sara C. Soto-DeRojas-Villarraga, AdrianaSanchez, RicardoJaimes, CamiloPerez-Prados, AntonioPatarroyo, Manuel E.Patarroyo, Manuel A.ORIGINAL1-s2-0-S0166093412001863-main.pdfapplication/pdf354275https://repository.urosario.edu.co/bitstreams/bbb76218-37a6-4c93-80e2-333d125624c2/download270ea1c8b77a87b371994b9d1714de5aMD51TEXT1-s2-0-S0166093412001863-main.pdf.txt1-s2-0-S0166093412001863-main.pdf.txtExtracted texttext/plain42870https://repository.urosario.edu.co/bitstreams/94e421fd-50c5-4dd3-96b9-16ce193c6abf/downloaddc0c8256e639d6c576664a6af7aca5c8MD52THUMBNAIL1-s2-0-S0166093412001863-main.pdf.jpg1-s2-0-S0166093412001863-main.pdf.jpgGenerated Thumbnailimage/jpeg4646https://repository.urosario.edu.co/bitstreams/3e1daa97-ec87-4d70-a6fd-ec55ebe8b354/download6b5784f656de406616b42d1e975ce103MD5310336/22494oai:repository.urosario.edu.co:10336/224942022-05-02 07:37:20.486475https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
title |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
spellingShingle |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus Virus DNA Abnormal laboratory result Adolescent Adult Analytic method Article Cancer screening Colposcopy Controlled study Disease course Female High risk population Human Human cell Hybrid capture assay 2 Intermethod comparison Nonhuman Papanicolaou test Polymerase chain reaction Post test probability Priority journal Statistical parameters Uterine cervix cancer Uterine cervix cytology Virus detection Virus DNA cell DNA interaction Wart virus Adult Cervix Uteri Colposcopy Cytological Techniques Female Humans Molecular Diagnostic Techniques Nucleic Acid Hybridization Papillomaviridae Papillomavirus Infections Polymerase Chain Reaction Prevalence Sensitivity and Specificity Virology Young Adult Human papillomavirus Human papillomavirus Hybrid capture assay 2 Polymerase chain reaction Screening Test performance |
title_short |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
title_full |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
title_fullStr |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
title_full_unstemmed |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
title_sort |
The diagnostic performance of classical molecular tests used for detecting human papillomavirus |
dc.subject.keyword.spa.fl_str_mv |
Virus DNA Abnormal laboratory result Adolescent Adult Analytic method Article Cancer screening Colposcopy Controlled study Disease course Female High risk population Human Human cell Hybrid capture assay 2 Intermethod comparison Nonhuman Papanicolaou test Polymerase chain reaction Post test probability Priority journal Statistical parameters Uterine cervix cancer Uterine cervix cytology Virus detection Virus DNA cell DNA interaction Wart virus Adult Cervix Uteri Colposcopy Cytological Techniques Female Humans Molecular Diagnostic Techniques Nucleic Acid Hybridization Papillomaviridae Papillomavirus Infections Polymerase Chain Reaction Prevalence Sensitivity and Specificity Virology Young Adult Human papillomavirus Human papillomavirus Hybrid capture assay 2 Polymerase chain reaction Screening Test performance |
topic |
Virus DNA Abnormal laboratory result Adolescent Adult Analytic method Article Cancer screening Colposcopy Controlled study Disease course Female High risk population Human Human cell Hybrid capture assay 2 Intermethod comparison Nonhuman Papanicolaou test Polymerase chain reaction Post test probability Priority journal Statistical parameters Uterine cervix cancer Uterine cervix cytology Virus detection Virus DNA cell DNA interaction Wart virus Adult Cervix Uteri Colposcopy Cytological Techniques Female Humans Molecular Diagnostic Techniques Nucleic Acid Hybridization Papillomaviridae Papillomavirus Infections Polymerase Chain Reaction Prevalence Sensitivity and Specificity Virology Young Adult Human papillomavirus Human papillomavirus Hybrid capture assay 2 Polymerase chain reaction Screening Test performance |
description |
Cervical samples were evaluated for human papillomavirus (HPV) presence using the hybrid capture-2 (HC2) assay and the polymerase chain reaction (PCR) with three different primer sets (GP5+/6+, MY09/11 and pU1M/2R). PCR results were compared to HC2 and results of all assays were compared to cytological and colposcopy findings. Post-test probability was assessed in individual assays and test combinations. HPV-DNA prevalence was 36.5% with HC2 and 55.2% with PCR. MY09/11 detected HPV-DNA in 38% of samples, GP5+/6+ in 19.1% and pU1M/2R in 16.4%. pU1M/2R and HC2 had the highest concordance (75.31%, k= 0.39 in the whole population; 74.1%, k= 0.5 in women with abnormal cytology). pU1M/2R had the best diagnostic performance, including optimal post-test probabilities and cervical abnormality detection (individually or in a panel of tests). Women positive for pU1M/2R may be at higher risk of disease progression; the assay performance when combined with a Pap smear in cervical cancer screening programs should be evaluated. © 2012 Elsevier B.V.. |
publishDate |
2012 |
dc.date.created.spa.fl_str_mv |
2012 |
dc.date.accessioned.none.fl_str_mv |
2020-05-25T23:56:43Z |
dc.date.available.none.fl_str_mv |
2020-05-25T23:56:43Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1016/j.jviromet.2012.05.023 |
dc.identifier.issn.none.fl_str_mv |
1660934 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/22494 |
url |
https://doi.org/10.1016/j.jviromet.2012.05.023 https://repository.urosario.edu.co/handle/10336/22494 |
identifier_str_mv |
1660934 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
38 |
dc.relation.citationIssue.none.fl_str_mv |
No. 1 |
dc.relation.citationStartPage.none.fl_str_mv |
32 |
dc.relation.citationTitle.none.fl_str_mv |
Journal of Virological Methods |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 185 |
dc.relation.ispartof.spa.fl_str_mv |
Journal of Virological Methods, ISSN:1660934, Vol.185, No.1 (2012); pp. 32-38 |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-84864324188&doi=10.1016%2fj.jviromet.2012.05.023&partnerID=40&md5=3165ee74600132b05b1a42afc665f3c4 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
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Abierto (Texto Completo) |
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Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
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