Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules

One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallograp...

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Tipo de recurso:
Fecha de publicación:
2011
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/23509
Acceso en línea:
https://doi.org/10.1016/j.bbrc.2011.05.145
https://repository.urosario.edu.co/handle/10336/23509
Palabra clave:
HLA DR1 antigen
Major histocompatibility antigen class 2
Malaria vaccine
SALSA protein
T lymphocyte receptor
Unclassified drug
Amino acid sequence
Article
Hydrogen bond
Immune response
Immunogenicity
Priority journal
Static electricity
X ray crystallography
Amino Acid Sequence
Histocompatibility Antigens Class II
HLA-DR Antigens
Humans
Malaria Vaccines
Molecular Sequence Data
Peptides
Protein Conformation
Static Electricity
HLA-dr?1*0301
Malaria
Molecular electrostatic potential
Receptor-ligand interaction
SALSA
X-Ray
Crystallography
Rights
License
Abierto (Texto Completo)
id EDOCUR2_22b0f22ca9007c35091b30ba566564ad
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spelling fbbf67da-1c24-466b-a823-fba9e2ba01f9-18cfb5397-8b01-486f-8e59-0d2598e502be-176e03223-040d-4e46-864f-3bdecc8d2790-12020-05-26T00:02:38Z2020-05-26T00:02:38Z2011One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallography structural data provided by the HLA-DR?1*0301-CLIP peptide interaction to compare native non-immunogenic and specifically-modified immunogenic peptides derived from the malarial SALSA protein, by analyzing molecular electrostatic potential surfaces on the most important regions of the peptide binding groove (Pockets 1, 4, 6 and 9). Important differences were found on the electrostatic potential induced by these peptides, particularly in MHC II conserved residues: Q?9, S?53, N?62, N?69, Y?30, Y?60, W?61, Q?70, K?71 and V?86, the same ones involved in establishing hydrogen bonds between Class II molecule-peptide and the recognition by T cell receptor, it correlating well with the change in their immunological properties.The results clearly suggest that modifications done on the electrostatic potential of these amino acids could favor the induction of different immune responses and therefore, their identification could allow modifying peptides a priori and in silico, so as to render them into immunogenic and protection-inducers and hence suitable components of a chemically-synthesized, multi-antigenic, minimal subunit based vaccine. © 2011 Elsevier Inc.application/pdfhttps://doi.org/10.1016/j.bbrc.2011.05.1450006291X10902104https://repository.urosario.edu.co/handle/10336/23509eng415No. 3410Biochemical and Biophysical Research CommunicationsVol. 410Biochemical and Biophysical Research Communications, ISSN:0006291X, 10902104, Vol.410, No.3 (2011); pp. 410-415https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960048690&doi=10.1016%2fj.bbrc.2011.05.145&partnerID=40&md5=f235f2a950912eaf538c91c4db5dc535Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURHLA DR1 antigenMajor histocompatibility antigen class 2Malaria vaccineSALSA proteinT lymphocyte receptorUnclassified drugAmino acid sequenceArticleHydrogen bondImmune responseImmunogenicityPriority journalStatic electricityX ray crystallographyAmino Acid SequenceHistocompatibility Antigens Class IIHLA-DR AntigensHumansMalaria VaccinesMolecular Sequence DataPeptidesProtein ConformationStatic ElectricityHLA-dr?1*0301MalariaMolecular electrostatic potentialReceptor-ligand interactionSALSAX-RayCrystallographyElectrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II moleculesarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Agudelo W.A.Galindo J.F.Patarroyo M.E.ORIGINALElectrostatic_potential_as_a_tool_to_und.pdfapplication/pdf850959https://repository.urosario.edu.co/bitstreams/572e6320-4a35-44ab-9dd0-24314f00d9d9/download29ed0337ad2ab0d41acb4b4e1f7f3962MD51TEXTElectrostatic_potential_as_a_tool_to_und.pdf.txtElectrostatic_potential_as_a_tool_to_und.pdf.txtExtracted texttext/plain31533https://repository.urosario.edu.co/bitstreams/d98e7b35-0741-47fa-99c5-bc0db9662a35/download2cb9b510225206e18361f6b8d6192d67MD52THUMBNAILElectrostatic_potential_as_a_tool_to_und.pdf.jpgElectrostatic_potential_as_a_tool_to_und.pdf.jpgGenerated Thumbnailimage/jpeg4795https://repository.urosario.edu.co/bitstreams/53716687-1ed4-44a4-98e1-ff7353c34a1f/downloaddf50befabe2c0b9c36c6ab01c32879bcMD5310336/23509oai:repository.urosario.edu.co:10336/235092022-05-02 07:37:14.544893https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
title Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
spellingShingle Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
HLA DR1 antigen
Major histocompatibility antigen class 2
Malaria vaccine
SALSA protein
T lymphocyte receptor
Unclassified drug
Amino acid sequence
Article
Hydrogen bond
Immune response
Immunogenicity
Priority journal
Static electricity
X ray crystallography
Amino Acid Sequence
Histocompatibility Antigens Class II
HLA-DR Antigens
Humans
Malaria Vaccines
Molecular Sequence Data
Peptides
Protein Conformation
Static Electricity
HLA-dr?1*0301
Malaria
Molecular electrostatic potential
Receptor-ligand interaction
SALSA
X-Ray
Crystallography
title_short Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
title_full Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
title_fullStr Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
title_full_unstemmed Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
title_sort Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
dc.subject.keyword.spa.fl_str_mv HLA DR1 antigen
Major histocompatibility antigen class 2
Malaria vaccine
SALSA protein
T lymphocyte receptor
Unclassified drug
Amino acid sequence
Article
Hydrogen bond
Immune response
Immunogenicity
Priority journal
Static electricity
X ray crystallography
Amino Acid Sequence
Histocompatibility Antigens Class II
HLA-DR Antigens
Humans
Malaria Vaccines
Molecular Sequence Data
Peptides
Protein Conformation
Static Electricity
HLA-dr?1*0301
Malaria
Molecular electrostatic potential
Receptor-ligand interaction
SALSA
topic HLA DR1 antigen
Major histocompatibility antigen class 2
Malaria vaccine
SALSA protein
T lymphocyte receptor
Unclassified drug
Amino acid sequence
Article
Hydrogen bond
Immune response
Immunogenicity
Priority journal
Static electricity
X ray crystallography
Amino Acid Sequence
Histocompatibility Antigens Class II
HLA-DR Antigens
Humans
Malaria Vaccines
Molecular Sequence Data
Peptides
Protein Conformation
Static Electricity
HLA-dr?1*0301
Malaria
Molecular electrostatic potential
Receptor-ligand interaction
SALSA
X-Ray
Crystallography
dc.subject.keyword.eng.fl_str_mv X-Ray
Crystallography
description One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallography structural data provided by the HLA-DR?1*0301-CLIP peptide interaction to compare native non-immunogenic and specifically-modified immunogenic peptides derived from the malarial SALSA protein, by analyzing molecular electrostatic potential surfaces on the most important regions of the peptide binding groove (Pockets 1, 4, 6 and 9). Important differences were found on the electrostatic potential induced by these peptides, particularly in MHC II conserved residues: Q?9, S?53, N?62, N?69, Y?30, Y?60, W?61, Q?70, K?71 and V?86, the same ones involved in establishing hydrogen bonds between Class II molecule-peptide and the recognition by T cell receptor, it correlating well with the change in their immunological properties.The results clearly suggest that modifications done on the electrostatic potential of these amino acids could favor the induction of different immune responses and therefore, their identification could allow modifying peptides a priori and in silico, so as to render them into immunogenic and protection-inducers and hence suitable components of a chemically-synthesized, multi-antigenic, minimal subunit based vaccine. © 2011 Elsevier Inc.
publishDate 2011
dc.date.created.spa.fl_str_mv 2011
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:02:38Z
dc.date.available.none.fl_str_mv 2020-05-26T00:02:38Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.bbrc.2011.05.145
dc.identifier.issn.none.fl_str_mv 0006291X
10902104
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/23509
url https://doi.org/10.1016/j.bbrc.2011.05.145
https://repository.urosario.edu.co/handle/10336/23509
identifier_str_mv 0006291X
10902104
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 415
dc.relation.citationIssue.none.fl_str_mv No. 3
dc.relation.citationStartPage.none.fl_str_mv 410
dc.relation.citationTitle.none.fl_str_mv Biochemical and Biophysical Research Communications
dc.relation.citationVolume.none.fl_str_mv Vol. 410
dc.relation.ispartof.spa.fl_str_mv Biochemical and Biophysical Research Communications, ISSN:0006291X, 10902104, Vol.410, No.3 (2011); pp. 410-415
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960048690&doi=10.1016%2fj.bbrc.2011.05.145&partnerID=40&md5=f235f2a950912eaf538c91c4db5dc535
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