Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules
One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallograp...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2011
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/23509
- Acceso en línea:
- https://doi.org/10.1016/j.bbrc.2011.05.145
https://repository.urosario.edu.co/handle/10336/23509
- Palabra clave:
- HLA DR1 antigen
Major histocompatibility antigen class 2
Malaria vaccine
SALSA protein
T lymphocyte receptor
Unclassified drug
Amino acid sequence
Article
Hydrogen bond
Immune response
Immunogenicity
Priority journal
Static electricity
X ray crystallography
Amino Acid Sequence
Histocompatibility Antigens Class II
HLA-DR Antigens
Humans
Malaria Vaccines
Molecular Sequence Data
Peptides
Protein Conformation
Static Electricity
HLA-dr?1*0301
Malaria
Molecular electrostatic potential
Receptor-ligand interaction
SALSA
X-Ray
Crystallography
- Rights
- License
- Abierto (Texto Completo)
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fbbf67da-1c24-466b-a823-fba9e2ba01f9-18cfb5397-8b01-486f-8e59-0d2598e502be-176e03223-040d-4e46-864f-3bdecc8d2790-12020-05-26T00:02:38Z2020-05-26T00:02:38Z2011One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallography structural data provided by the HLA-DR?1*0301-CLIP peptide interaction to compare native non-immunogenic and specifically-modified immunogenic peptides derived from the malarial SALSA protein, by analyzing molecular electrostatic potential surfaces on the most important regions of the peptide binding groove (Pockets 1, 4, 6 and 9). Important differences were found on the electrostatic potential induced by these peptides, particularly in MHC II conserved residues: Q?9, S?53, N?62, N?69, Y?30, Y?60, W?61, Q?70, K?71 and V?86, the same ones involved in establishing hydrogen bonds between Class II molecule-peptide and the recognition by T cell receptor, it correlating well with the change in their immunological properties.The results clearly suggest that modifications done on the electrostatic potential of these amino acids could favor the induction of different immune responses and therefore, their identification could allow modifying peptides a priori and in silico, so as to render them into immunogenic and protection-inducers and hence suitable components of a chemically-synthesized, multi-antigenic, minimal subunit based vaccine. © 2011 Elsevier Inc.application/pdfhttps://doi.org/10.1016/j.bbrc.2011.05.1450006291X10902104https://repository.urosario.edu.co/handle/10336/23509eng415No. 3410Biochemical and Biophysical Research CommunicationsVol. 410Biochemical and Biophysical Research Communications, ISSN:0006291X, 10902104, Vol.410, No.3 (2011); pp. 410-415https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960048690&doi=10.1016%2fj.bbrc.2011.05.145&partnerID=40&md5=f235f2a950912eaf538c91c4db5dc535Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURHLA DR1 antigenMajor histocompatibility antigen class 2Malaria vaccineSALSA proteinT lymphocyte receptorUnclassified drugAmino acid sequenceArticleHydrogen bondImmune responseImmunogenicityPriority journalStatic electricityX ray crystallographyAmino Acid SequenceHistocompatibility Antigens Class IIHLA-DR AntigensHumansMalaria VaccinesMolecular Sequence DataPeptidesProtein ConformationStatic ElectricityHLA-dr?1*0301MalariaMolecular electrostatic potentialReceptor-ligand interactionSALSAX-RayCrystallographyElectrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II moleculesarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Agudelo W.A.Galindo J.F.Patarroyo M.E.ORIGINALElectrostatic_potential_as_a_tool_to_und.pdfapplication/pdf850959https://repository.urosario.edu.co/bitstreams/572e6320-4a35-44ab-9dd0-24314f00d9d9/download29ed0337ad2ab0d41acb4b4e1f7f3962MD51TEXTElectrostatic_potential_as_a_tool_to_und.pdf.txtElectrostatic_potential_as_a_tool_to_und.pdf.txtExtracted texttext/plain31533https://repository.urosario.edu.co/bitstreams/d98e7b35-0741-47fa-99c5-bc0db9662a35/download2cb9b510225206e18361f6b8d6192d67MD52THUMBNAILElectrostatic_potential_as_a_tool_to_und.pdf.jpgElectrostatic_potential_as_a_tool_to_und.pdf.jpgGenerated Thumbnailimage/jpeg4795https://repository.urosario.edu.co/bitstreams/53716687-1ed4-44a4-98e1-ff7353c34a1f/downloaddf50befabe2c0b9c36c6ab01c32879bcMD5310336/23509oai:repository.urosario.edu.co:10336/235092022-05-02 07:37:14.544893https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
title |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
spellingShingle |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules HLA DR1 antigen Major histocompatibility antigen class 2 Malaria vaccine SALSA protein T lymphocyte receptor Unclassified drug Amino acid sequence Article Hydrogen bond Immune response Immunogenicity Priority journal Static electricity X ray crystallography Amino Acid Sequence Histocompatibility Antigens Class II HLA-DR Antigens Humans Malaria Vaccines Molecular Sequence Data Peptides Protein Conformation Static Electricity HLA-dr?1*0301 Malaria Molecular electrostatic potential Receptor-ligand interaction SALSA X-Ray Crystallography |
title_short |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
title_full |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
title_fullStr |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
title_full_unstemmed |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
title_sort |
Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules |
dc.subject.keyword.spa.fl_str_mv |
HLA DR1 antigen Major histocompatibility antigen class 2 Malaria vaccine SALSA protein T lymphocyte receptor Unclassified drug Amino acid sequence Article Hydrogen bond Immune response Immunogenicity Priority journal Static electricity X ray crystallography Amino Acid Sequence Histocompatibility Antigens Class II HLA-DR Antigens Humans Malaria Vaccines Molecular Sequence Data Peptides Protein Conformation Static Electricity HLA-dr?1*0301 Malaria Molecular electrostatic potential Receptor-ligand interaction SALSA |
topic |
HLA DR1 antigen Major histocompatibility antigen class 2 Malaria vaccine SALSA protein T lymphocyte receptor Unclassified drug Amino acid sequence Article Hydrogen bond Immune response Immunogenicity Priority journal Static electricity X ray crystallography Amino Acid Sequence Histocompatibility Antigens Class II HLA-DR Antigens Humans Malaria Vaccines Molecular Sequence Data Peptides Protein Conformation Static Electricity HLA-dr?1*0301 Malaria Molecular electrostatic potential Receptor-ligand interaction SALSA X-Ray Crystallography |
dc.subject.keyword.eng.fl_str_mv |
X-Ray Crystallography |
description |
One of the most important problems in vaccine development consists in understanding receptor-ligand interactions between Class II Major Histocompatibility Complex molecules (MHC II) and antigenic peptides involved in inducing an appropriate immune response. In this study, we used X-ray crystallography structural data provided by the HLA-DR?1*0301-CLIP peptide interaction to compare native non-immunogenic and specifically-modified immunogenic peptides derived from the malarial SALSA protein, by analyzing molecular electrostatic potential surfaces on the most important regions of the peptide binding groove (Pockets 1, 4, 6 and 9). Important differences were found on the electrostatic potential induced by these peptides, particularly in MHC II conserved residues: Q?9, S?53, N?62, N?69, Y?30, Y?60, W?61, Q?70, K?71 and V?86, the same ones involved in establishing hydrogen bonds between Class II molecule-peptide and the recognition by T cell receptor, it correlating well with the change in their immunological properties.The results clearly suggest that modifications done on the electrostatic potential of these amino acids could favor the induction of different immune responses and therefore, their identification could allow modifying peptides a priori and in silico, so as to render them into immunogenic and protection-inducers and hence suitable components of a chemically-synthesized, multi-antigenic, minimal subunit based vaccine. © 2011 Elsevier Inc. |
publishDate |
2011 |
dc.date.created.spa.fl_str_mv |
2011 |
dc.date.accessioned.none.fl_str_mv |
2020-05-26T00:02:38Z |
dc.date.available.none.fl_str_mv |
2020-05-26T00:02:38Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1016/j.bbrc.2011.05.145 |
dc.identifier.issn.none.fl_str_mv |
0006291X 10902104 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/23509 |
url |
https://doi.org/10.1016/j.bbrc.2011.05.145 https://repository.urosario.edu.co/handle/10336/23509 |
identifier_str_mv |
0006291X 10902104 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
415 |
dc.relation.citationIssue.none.fl_str_mv |
No. 3 |
dc.relation.citationStartPage.none.fl_str_mv |
410 |
dc.relation.citationTitle.none.fl_str_mv |
Biochemical and Biophysical Research Communications |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 410 |
dc.relation.ispartof.spa.fl_str_mv |
Biochemical and Biophysical Research Communications, ISSN:0006291X, 10902104, Vol.410, No.3 (2011); pp. 410-415 |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-79960048690&doi=10.1016%2fj.bbrc.2011.05.145&partnerID=40&md5=f235f2a950912eaf538c91c4db5dc535 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
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reponame:Repositorio Institucional EdocUR |
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