Phylogenetic signal, evolutionary process, and rate
A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependen...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2008
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/26727
- Acceso en línea:
- https://doi.org/10.1080/10635150802302427
https://repository.urosario.edu.co/handle/10336/26727
- Palabra clave:
- Comparative method
Evolutionary lability
Functional constraint
Genetic drift
Niche conservatism
Quantitative characters
Phylogenetics
- Rights
- License
- Abierto (Texto Completo)
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5fe626cc-9fa8-40ff-a954-105329f7fd2d-14b08f6d5-2b22-4ae4-b0bd-e4bc5178e50b-1ac8f4c44-226e-410d-88b4-749d08a07c77-12020-08-19T14:40:08Z2020-08-19T14:40:08Z2008-08-01A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependence among species' trait values due to their phylogenetic relationships. Although phylogenetic signal is a measure of pattern (statistical dependence), there has nonetheless been a widespread propensity in the literature to attribute this pattern to aspects of the evolutionary process or rate. This may be due, in part, to the perception that high evolutionary rate necessarily results in low phylogenetic signal; and, conversely, that low evolutionary rate or stabilizing selection results in high phylogenetic signal (due to the resulting high resemblance between related species). In this study, we use individual-based numerical simulations on stochastic phylogenetic trees to clarify the relationship between phylogenetic signal, rate, and evolutionary process. Under the simplest model for quantitative trait evolution, homogeneous rate genetic drift, there is no relation between evolutionary rate and phylogenetic signal. For other circumstances, such as functional constraint, fluctuating selection, niche conservatism, and evolutionary heterogeneity, the relationship between process, rate, and phylogenetic signal is complex. For these reasons, we recommend against interpretations of evolutionary process or rate based on estimates of phylogenetic signal.application/pdfhttps://doi.org/10.1080/10635150802302427ISSN: 1063-5157EISSN: 1076-836Xhttps://repository.urosario.edu.co/handle/10336/26727engSociety of Systematic Biologists601No. 4591Systematic BiologyVol. 57Systematic Biology, ISSN: 1063-5157;EISSN: 1076-836X, Vol.57, No.4 (2008); pp. 591–601https://watermark.silverchair.com/57-4-591.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAArIwggKuBgkqhkiG9w0BBwagggKfMIICmwIBADCCApQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMX0dHm5QQ0Rv02RWEAgEQgIICZaTDzLD8TsCLrEsmOg5ObVUer3hFYKacKOWDgOP_do7yboCgN8MwbPVntgLcdz0yVJl-7mHvjKPpAHchwSJnmiyIUi5BaeBaePhxAvxHroxPD78t7Vs9iz2JbkXPuibHTR757979k1tfdp6pbEjJBtcEecMGFWZmnO-8-glqoQUpwTUhlImy3kqhFUFdyLBp-uz9TJZwm1wQpQpwlbkYZ10q6dLXyVaGdEk2otDE77OC7nZA4WeBQP_5DdVw75yy5-m5J_q8GKKHQEcFZm6WYy8vLr3_giw-PxHT72F_zh5iQy3jQ0M07pEs-g5hS_-Juo4ZJcJx-J6NFlj9IOh87qnUYtbzhQ869B8tahurTKzyuoiI5KSKGpgVQtE1dRGGiHZ8p96o26Wtph6KwUnk8eH-9IjguPTcHs5DaNh5kIQZgnznpM_YZDpBXcqXGyJnB2KblwnURVGOTjxV0LP_r45aICNbPftby_lqVRpBwalwI92Pt1NRJ0vMHAA_pow45g1JDBo8Hvin8RAiyJFkOoCas4952CQI2NSe7tCdjTXf9YbPI4g38xUB5QqzvE_MRZL-3_e_ohaAnRxA9bO5PFI9J2qcEmlXKlCjatU2gIvbj0ZLzRc1WU2GNJ1M8gFBt7G4YWSvjaHkdy-iCxsGYfYaKPHqY30stmmJIWkO-lvhJNpax7lw1iQEXWGfxie_JrDHi57FXUAe5ozhsx1L4tXtTpGLd-_hzBiLNVt_TUuzErhc0qul74lUl4esr-Z_jKdVPWxEybYnJ0afnvaGHqi0ERugbTaBHg3obOEEEoKyC2GT4MIAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Systematic Biologyinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURComparative methodEvolutionary labilityFunctional constraintGenetic driftNiche conservatismQuantitative charactersPhylogeneticsPhylogenetic signal, evolutionary process, and rateSeñal filogenética, proceso evolutivo y velocidad.articleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Revell, Liam J.Harmon, Luke J.Collar, David C.10336/26727oai:repository.urosario.edu.co:10336/267272022-05-02 07:37:13.331307https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Phylogenetic signal, evolutionary process, and rate |
dc.title.TranslatedTitle.spa.fl_str_mv |
Señal filogenética, proceso evolutivo y velocidad. |
title |
Phylogenetic signal, evolutionary process, and rate |
spellingShingle |
Phylogenetic signal, evolutionary process, and rate Comparative method Evolutionary lability Functional constraint Genetic drift Niche conservatism Quantitative characters Phylogenetics |
title_short |
Phylogenetic signal, evolutionary process, and rate |
title_full |
Phylogenetic signal, evolutionary process, and rate |
title_fullStr |
Phylogenetic signal, evolutionary process, and rate |
title_full_unstemmed |
Phylogenetic signal, evolutionary process, and rate |
title_sort |
Phylogenetic signal, evolutionary process, and rate |
dc.subject.keyword.spa.fl_str_mv |
Comparative method Evolutionary lability Functional constraint Genetic drift Niche conservatism Quantitative characters Phylogenetics |
topic |
Comparative method Evolutionary lability Functional constraint Genetic drift Niche conservatism Quantitative characters Phylogenetics |
description |
A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependence among species' trait values due to their phylogenetic relationships. Although phylogenetic signal is a measure of pattern (statistical dependence), there has nonetheless been a widespread propensity in the literature to attribute this pattern to aspects of the evolutionary process or rate. This may be due, in part, to the perception that high evolutionary rate necessarily results in low phylogenetic signal; and, conversely, that low evolutionary rate or stabilizing selection results in high phylogenetic signal (due to the resulting high resemblance between related species). In this study, we use individual-based numerical simulations on stochastic phylogenetic trees to clarify the relationship between phylogenetic signal, rate, and evolutionary process. Under the simplest model for quantitative trait evolution, homogeneous rate genetic drift, there is no relation between evolutionary rate and phylogenetic signal. For other circumstances, such as functional constraint, fluctuating selection, niche conservatism, and evolutionary heterogeneity, the relationship between process, rate, and phylogenetic signal is complex. For these reasons, we recommend against interpretations of evolutionary process or rate based on estimates of phylogenetic signal. |
publishDate |
2008 |
dc.date.created.spa.fl_str_mv |
2008-08-01 |
dc.date.accessioned.none.fl_str_mv |
2020-08-19T14:40:08Z |
dc.date.available.none.fl_str_mv |
2020-08-19T14:40:08Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1080/10635150802302427 |
dc.identifier.issn.none.fl_str_mv |
ISSN: 1063-5157 EISSN: 1076-836X |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/26727 |
url |
https://doi.org/10.1080/10635150802302427 https://repository.urosario.edu.co/handle/10336/26727 |
identifier_str_mv |
ISSN: 1063-5157 EISSN: 1076-836X |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
601 |
dc.relation.citationIssue.none.fl_str_mv |
No. 4 |
dc.relation.citationStartPage.none.fl_str_mv |
591 |
dc.relation.citationTitle.none.fl_str_mv |
Systematic Biology |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 57 |
dc.relation.ispartof.spa.fl_str_mv |
Systematic Biology, ISSN: 1063-5157;EISSN: 1076-836X, Vol.57, No.4 (2008); pp. 591–601 |
dc.relation.uri.spa.fl_str_mv |
https://watermark.silverchair.com/57-4-591.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAArIwggKuBgkqhkiG9w0BBwagggKfMIICmwIBADCCApQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMX0dHm5QQ0Rv02RWEAgEQgIICZaTDzLD8TsCLrEsmOg5ObVUer3hFYKacKOWDgOP_do7yboCgN8MwbPVntgLcdz0yVJl-7mHvjKPpAHchwSJnmiyIUi5BaeBaePhxAvxHroxPD78t7Vs9iz2JbkXPuibHTR757979k1tfdp6pbEjJBtcEecMGFWZmnO-8-glqoQUpwTUhlImy3kqhFUFdyLBp-uz9TJZwm1wQpQpwlbkYZ10q6dLXyVaGdEk2otDE77OC7nZA4WeBQP_5DdVw75yy5-m5J_q8GKKHQEcFZm6WYy8vLr3_giw-PxHT72F_zh5iQy3jQ0M07pEs-g5hS_-Juo4ZJcJx-J6NFlj9IOh87qnUYtbzhQ869B8tahurTKzyuoiI5KSKGpgVQtE1dRGGiHZ8p96o26Wtph6KwUnk8eH-9IjguPTcHs5DaNh5kIQZgnznpM_YZDpBXcqXGyJnB2KblwnURVGOTjxV0LP_r45aICNbPftby_lqVRpBwalwI92Pt1NRJ0vMHAA_pow45g1JDBo8Hvin8RAiyJFkOoCas4952CQI2NSe7tCdjTXf9YbPI4g38xUB5QqzvE_MRZL-3_e_ohaAnRxA9bO5PFI9J2qcEmlXKlCjatU2gIvbj0ZLzRc1WU2GNJ1M8gFBt7G4YWSvjaHkdy-iCxsGYfYaKPHqY30stmmJIWkO-lvhJNpax7lw1iQEXWGfxie_JrDHi57FXUAe5ozhsx1L4tXtTpGLd-_hzBiLNVt_TUuzErhc0qul74lUl4esr-Z_jKdVPWxEybYnJ0afnvaGHqi0ERugbTaBHg3obOEEEoKyC2GT4MI |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Society of Systematic Biologists |
dc.source.spa.fl_str_mv |
Systematic Biology |
institution |
Universidad del Rosario |
dc.source.instname.none.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.none.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167734868508672 |