Phylogenetic signal, evolutionary process, and rate

A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependen...

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Fecha de publicación:
2008
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/26727
Acceso en línea:
https://doi.org/10.1080/10635150802302427
https://repository.urosario.edu.co/handle/10336/26727
Palabra clave:
Comparative method
Evolutionary lability
Functional constraint
Genetic drift
Niche conservatism
Quantitative characters
Phylogenetics
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Abierto (Texto Completo)
id EDOCUR2_21be3c396f688260753dafc2917fc38c
oai_identifier_str oai:repository.urosario.edu.co:10336/26727
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
spelling 5fe626cc-9fa8-40ff-a954-105329f7fd2d-14b08f6d5-2b22-4ae4-b0bd-e4bc5178e50b-1ac8f4c44-226e-410d-88b4-749d08a07c77-12020-08-19T14:40:08Z2020-08-19T14:40:08Z2008-08-01A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependence among species' trait values due to their phylogenetic relationships. Although phylogenetic signal is a measure of pattern (statistical dependence), there has nonetheless been a widespread propensity in the literature to attribute this pattern to aspects of the evolutionary process or rate. This may be due, in part, to the perception that high evolutionary rate necessarily results in low phylogenetic signal; and, conversely, that low evolutionary rate or stabilizing selection results in high phylogenetic signal (due to the resulting high resemblance between related species). In this study, we use individual-based numerical simulations on stochastic phylogenetic trees to clarify the relationship between phylogenetic signal, rate, and evolutionary process. Under the simplest model for quantitative trait evolution, homogeneous rate genetic drift, there is no relation between evolutionary rate and phylogenetic signal. For other circumstances, such as functional constraint, fluctuating selection, niche conservatism, and evolutionary heterogeneity, the relationship between process, rate, and phylogenetic signal is complex. For these reasons, we recommend against interpretations of evolutionary process or rate based on estimates of phylogenetic signal.application/pdfhttps://doi.org/10.1080/10635150802302427ISSN: 1063-5157EISSN: 1076-836Xhttps://repository.urosario.edu.co/handle/10336/26727engSociety of Systematic Biologists601No. 4591Systematic BiologyVol. 57Systematic Biology, ISSN: 1063-5157;EISSN: 1076-836X, Vol.57, No.4 (2008); pp. 591–601https://watermark.silverchair.com/57-4-591.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAArIwggKuBgkqhkiG9w0BBwagggKfMIICmwIBADCCApQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMX0dHm5QQ0Rv02RWEAgEQgIICZaTDzLD8TsCLrEsmOg5ObVUer3hFYKacKOWDgOP_do7yboCgN8MwbPVntgLcdz0yVJl-7mHvjKPpAHchwSJnmiyIUi5BaeBaePhxAvxHroxPD78t7Vs9iz2JbkXPuibHTR757979k1tfdp6pbEjJBtcEecMGFWZmnO-8-glqoQUpwTUhlImy3kqhFUFdyLBp-uz9TJZwm1wQpQpwlbkYZ10q6dLXyVaGdEk2otDE77OC7nZA4WeBQP_5DdVw75yy5-m5J_q8GKKHQEcFZm6WYy8vLr3_giw-PxHT72F_zh5iQy3jQ0M07pEs-g5hS_-Juo4ZJcJx-J6NFlj9IOh87qnUYtbzhQ869B8tahurTKzyuoiI5KSKGpgVQtE1dRGGiHZ8p96o26Wtph6KwUnk8eH-9IjguPTcHs5DaNh5kIQZgnznpM_YZDpBXcqXGyJnB2KblwnURVGOTjxV0LP_r45aICNbPftby_lqVRpBwalwI92Pt1NRJ0vMHAA_pow45g1JDBo8Hvin8RAiyJFkOoCas4952CQI2NSe7tCdjTXf9YbPI4g38xUB5QqzvE_MRZL-3_e_ohaAnRxA9bO5PFI9J2qcEmlXKlCjatU2gIvbj0ZLzRc1WU2GNJ1M8gFBt7G4YWSvjaHkdy-iCxsGYfYaKPHqY30stmmJIWkO-lvhJNpax7lw1iQEXWGfxie_JrDHi57FXUAe5ozhsx1L4tXtTpGLd-_hzBiLNVt_TUuzErhc0qul74lUl4esr-Z_jKdVPWxEybYnJ0afnvaGHqi0ERugbTaBHg3obOEEEoKyC2GT4MIAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Systematic Biologyinstname:Universidad del Rosarioreponame:Repositorio Institucional EdocURComparative methodEvolutionary labilityFunctional constraintGenetic driftNiche conservatismQuantitative charactersPhylogeneticsPhylogenetic signal, evolutionary process, and rateSeñal filogenética, proceso evolutivo y velocidad.articleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Revell, Liam J.Harmon, Luke J.Collar, David C.10336/26727oai:repository.urosario.edu.co:10336/267272022-05-02 07:37:13.331307https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Phylogenetic signal, evolutionary process, and rate
dc.title.TranslatedTitle.spa.fl_str_mv Señal filogenética, proceso evolutivo y velocidad.
title Phylogenetic signal, evolutionary process, and rate
spellingShingle Phylogenetic signal, evolutionary process, and rate
Comparative method
Evolutionary lability
Functional constraint
Genetic drift
Niche conservatism
Quantitative characters
Phylogenetics
title_short Phylogenetic signal, evolutionary process, and rate
title_full Phylogenetic signal, evolutionary process, and rate
title_fullStr Phylogenetic signal, evolutionary process, and rate
title_full_unstemmed Phylogenetic signal, evolutionary process, and rate
title_sort Phylogenetic signal, evolutionary process, and rate
dc.subject.keyword.spa.fl_str_mv Comparative method
Evolutionary lability
Functional constraint
Genetic drift
Niche conservatism
Quantitative characters
Phylogenetics
topic Comparative method
Evolutionary lability
Functional constraint
Genetic drift
Niche conservatism
Quantitative characters
Phylogenetics
description A recent advance in the phylogenetic comparative analysis of continuous traits has been explicit, model-based measurement of “phylogenetic signal” in data sets composed of observations collected from species related by a phylogenetic tree. Phylogenetic signal is a measure of the statistical dependence among species' trait values due to their phylogenetic relationships. Although phylogenetic signal is a measure of pattern (statistical dependence), there has nonetheless been a widespread propensity in the literature to attribute this pattern to aspects of the evolutionary process or rate. This may be due, in part, to the perception that high evolutionary rate necessarily results in low phylogenetic signal; and, conversely, that low evolutionary rate or stabilizing selection results in high phylogenetic signal (due to the resulting high resemblance between related species). In this study, we use individual-based numerical simulations on stochastic phylogenetic trees to clarify the relationship between phylogenetic signal, rate, and evolutionary process. Under the simplest model for quantitative trait evolution, homogeneous rate genetic drift, there is no relation between evolutionary rate and phylogenetic signal. For other circumstances, such as functional constraint, fluctuating selection, niche conservatism, and evolutionary heterogeneity, the relationship between process, rate, and phylogenetic signal is complex. For these reasons, we recommend against interpretations of evolutionary process or rate based on estimates of phylogenetic signal.
publishDate 2008
dc.date.created.spa.fl_str_mv 2008-08-01
dc.date.accessioned.none.fl_str_mv 2020-08-19T14:40:08Z
dc.date.available.none.fl_str_mv 2020-08-19T14:40:08Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1080/10635150802302427
dc.identifier.issn.none.fl_str_mv ISSN: 1063-5157
EISSN: 1076-836X
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/26727
url https://doi.org/10.1080/10635150802302427
https://repository.urosario.edu.co/handle/10336/26727
identifier_str_mv ISSN: 1063-5157
EISSN: 1076-836X
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 601
dc.relation.citationIssue.none.fl_str_mv No. 4
dc.relation.citationStartPage.none.fl_str_mv 591
dc.relation.citationTitle.none.fl_str_mv Systematic Biology
dc.relation.citationVolume.none.fl_str_mv Vol. 57
dc.relation.ispartof.spa.fl_str_mv Systematic Biology, ISSN: 1063-5157;EISSN: 1076-836X, Vol.57, No.4 (2008); pp. 591–601
dc.relation.uri.spa.fl_str_mv https://watermark.silverchair.com/57-4-591.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAArIwggKuBgkqhkiG9w0BBwagggKfMIICmwIBADCCApQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMX0dHm5QQ0Rv02RWEAgEQgIICZaTDzLD8TsCLrEsmOg5ObVUer3hFYKacKOWDgOP_do7yboCgN8MwbPVntgLcdz0yVJl-7mHvjKPpAHchwSJnmiyIUi5BaeBaePhxAvxHroxPD78t7Vs9iz2JbkXPuibHTR757979k1tfdp6pbEjJBtcEecMGFWZmnO-8-glqoQUpwTUhlImy3kqhFUFdyLBp-uz9TJZwm1wQpQpwlbkYZ10q6dLXyVaGdEk2otDE77OC7nZA4WeBQP_5DdVw75yy5-m5J_q8GKKHQEcFZm6WYy8vLr3_giw-PxHT72F_zh5iQy3jQ0M07pEs-g5hS_-Juo4ZJcJx-J6NFlj9IOh87qnUYtbzhQ869B8tahurTKzyuoiI5KSKGpgVQtE1dRGGiHZ8p96o26Wtph6KwUnk8eH-9IjguPTcHs5DaNh5kIQZgnznpM_YZDpBXcqXGyJnB2KblwnURVGOTjxV0LP_r45aICNbPftby_lqVRpBwalwI92Pt1NRJ0vMHAA_pow45g1JDBo8Hvin8RAiyJFkOoCas4952CQI2NSe7tCdjTXf9YbPI4g38xUB5QqzvE_MRZL-3_e_ohaAnRxA9bO5PFI9J2qcEmlXKlCjatU2gIvbj0ZLzRc1WU2GNJ1M8gFBt7G4YWSvjaHkdy-iCxsGYfYaKPHqY30stmmJIWkO-lvhJNpax7lw1iQEXWGfxie_JrDHi57FXUAe5ozhsx1L4tXtTpGLd-_hzBiLNVt_TUuzErhc0qul74lUl4esr-Z_jKdVPWxEybYnJ0afnvaGHqi0ERugbTaBHg3obOEEEoKyC2GT4MI
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Society of Systematic Biologists
dc.source.spa.fl_str_mv Systematic Biology
institution Universidad del Rosario
dc.source.instname.none.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.none.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
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