Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 E...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2011
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/22400
- Acceso en línea:
- https://doi.org/10.1136/ard.2011.154104
https://repository.urosario.edu.co/handle/10336/22400
- Palabra clave:
- CD11b antigen
Cytotoxic T lymphocyte antigen 4
Fc receptor iia
Interleukin 21
Intermedin
Intermedin 5
Methyl cpg binding protein 2
Non receptor protein tyrosine phosphatase 22
OX40 ligand
Programmed death 1 receptor
STAT4 protein
Unclassified drug
Adult
African American
Article
Asian
Discoid lupus erythematosus
Ethnic group
European
Female
Gene frequency
Gene locus
Genetic predisposition
Genetic susceptibility
Genotype
Hematologic disease
Hispanic
Human
Inflammation
Kidney disease
Major clinical study
Male
Mouth ulcer
Neurologic disease
Onset age
Phenotype
Photosensitivity
Priority journal
Rash
Single nucleotide polymorphism
Systemic lupus erythematosus
Adult
African Americans
Asian Continental Ancestry Group
European Continental Ancestry Group
Female
Genetic Loci
Genetic Predisposition to Disease
Genotype
Humans
Lupus Nephritis
Male
Middle Aged
Oral Ulcer
Phenotype
Young Adult
Systemic
Single Nucleotide
Discoid
Lupus Erythematosus
Lupus Erythematosus
Polymorphism
- Rights
- License
- Abierto (Texto Completo)
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oai:repository.urosario.edu.co:10336/22400 |
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EDOCUR2 |
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Repositorio EdocUR - U. Rosario |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
title |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
spellingShingle |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus CD11b antigen Cytotoxic T lymphocyte antigen 4 Fc receptor iia Interleukin 21 Intermedin Intermedin 5 Methyl cpg binding protein 2 Non receptor protein tyrosine phosphatase 22 OX40 ligand Programmed death 1 receptor STAT4 protein Unclassified drug Adult African American Article Asian Discoid lupus erythematosus Ethnic group European Female Gene frequency Gene locus Genetic predisposition Genetic susceptibility Genotype Hematologic disease Hispanic Human Inflammation Kidney disease Major clinical study Male Mouth ulcer Neurologic disease Onset age Phenotype Photosensitivity Priority journal Rash Single nucleotide polymorphism Systemic lupus erythematosus Adult African Americans Asian Continental Ancestry Group European Continental Ancestry Group Female Genetic Loci Genetic Predisposition to Disease Genotype Humans Lupus Nephritis Male Middle Aged Oral Ulcer Phenotype Young Adult Systemic Single Nucleotide Discoid Lupus Erythematosus Lupus Erythematosus Polymorphism |
title_short |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
title_full |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
title_fullStr |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
title_full_unstemmed |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
title_sort |
Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus |
dc.subject.keyword.spa.fl_str_mv |
CD11b antigen Cytotoxic T lymphocyte antigen 4 Fc receptor iia Interleukin 21 Intermedin Intermedin 5 Methyl cpg binding protein 2 Non receptor protein tyrosine phosphatase 22 OX40 ligand Programmed death 1 receptor STAT4 protein Unclassified drug Adult African American Article Asian Discoid lupus erythematosus Ethnic group European Female Gene frequency Gene locus Genetic predisposition Genetic susceptibility Genotype Hematologic disease Hispanic Human Inflammation Kidney disease Major clinical study Male Mouth ulcer Neurologic disease Onset age Phenotype Photosensitivity Priority journal Rash Single nucleotide polymorphism Systemic lupus erythematosus Adult African Americans Asian Continental Ancestry Group European Continental Ancestry Group Female Genetic Loci Genetic Predisposition to Disease Genotype Humans Lupus Nephritis Male Middle Aged Oral Ulcer Phenotype Young Adult |
topic |
CD11b antigen Cytotoxic T lymphocyte antigen 4 Fc receptor iia Interleukin 21 Intermedin Intermedin 5 Methyl cpg binding protein 2 Non receptor protein tyrosine phosphatase 22 OX40 ligand Programmed death 1 receptor STAT4 protein Unclassified drug Adult African American Article Asian Discoid lupus erythematosus Ethnic group European Female Gene frequency Gene locus Genetic predisposition Genetic susceptibility Genotype Hematologic disease Hispanic Human Inflammation Kidney disease Major clinical study Male Mouth ulcer Neurologic disease Onset age Phenotype Photosensitivity Priority journal Rash Single nucleotide polymorphism Systemic lupus erythematosus Adult African Americans Asian Continental Ancestry Group European Continental Ancestry Group Female Genetic Loci Genetic Predisposition to Disease Genotype Humans Lupus Nephritis Male Middle Aged Oral Ulcer Phenotype Young Adult Systemic Single Nucleotide Discoid Lupus Erythematosus Lupus Erythematosus Polymorphism |
dc.subject.keyword.eng.fl_str_mv |
Systemic Single Nucleotide Discoid Lupus Erythematosus Lupus Erythematosus Polymorphism |
description |
Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 European-derived, 547 Hispanic, 1590 African-American and 1191 Asian lupus patients were genotyped for 16 confirmed lupus susceptibility loci. Ancestry informative markers were genotyped to calculate and adjust for admixture. The association between the risk allele in each locus was determined and compared in patients with and without the various clinical manifestations included in the ACR criteria. Results: Renal disorder was significantly correlated with the lupus risk allele in ITGAM (p=5.0 × 10-6, OR 1.25, 95% CI 1.12 to 1.35) and in TNFSF4 (p=0.0013, OR 1.14, 95% CI 1.07 to 1.25). Other significant findings include the association between risk alleles in FCGR2A and malar rash (p=0.0031, OR 1.11, 95% CI 1.17 to 1.33), ITGAM and discoid rash (p=0.0020, OR 1.20, 95% CI 1.06 to 1.33), STAT4 and protection from oral ulcers (p=0.0027, OR 0.89, 95% CI 0.83 to 0.96) and IL21 and haematological disorder (p=0.0027, OR 1.13, 95% CI 1.04 to 1.22). All these associations are significant with a false discovery rate of and lt;0.05 and pass the significance threshold using Bonferroni correction for multiple testing. Conclusion: Significant associations were found between lupus clinical manifestations and the FCGR2A, ITGAM, STAT4, TNSF4 and IL21 genes. The findings suggest that genetic profiling might be a useful tool to predict disease manifestations in lupus patients in the future. |
publishDate |
2011 |
dc.date.created.spa.fl_str_mv |
2011 |
dc.date.accessioned.none.fl_str_mv |
2020-05-25T23:56:20Z |
dc.date.available.none.fl_str_mv |
2020-05-25T23:56:20Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1136/ard.2011.154104 |
dc.identifier.issn.none.fl_str_mv |
00034967 14682060 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/22400 |
url |
https://doi.org/10.1136/ard.2011.154104 https://repository.urosario.edu.co/handle/10336/22400 |
identifier_str_mv |
00034967 14682060 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
1757 |
dc.relation.citationIssue.none.fl_str_mv |
No. 10 |
dc.relation.citationStartPage.none.fl_str_mv |
1752 |
dc.relation.citationTitle.none.fl_str_mv |
Annals of the Rheumatic Diseases |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 70 |
dc.relation.ispartof.spa.fl_str_mv |
Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.70, No.10 (2011); pp. 1752-1757 |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-80052461085&doi=10.1136%2fard.2011.154104&partnerID=40&md5=c76823864585427a58f54f18fbbe7d0b |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
institution |
Universidad del Rosario |
dc.source.instname.spa.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167670215409664 |
spelling |
00acf8db-8603-47a3-b350-6935efd9f52cec3482a1-b1c0-4202-99cd-8d044fc9f071c9806c7b-ee41-43bf-9d77-36cfcbd598f12c1a571c-3410-4f60-a580-17327c63a0aa40272400-4936-42de-a624-7840e79e1e9f25992029-f040-4490-8273-14ecb1e009b2bed12cc1-91ea-4542-8f9f-bdff08c065833abb7dff-57eb-4dc5-865d-00335072cbae650495dc-1bb8-4baa-a757-5e8405756ff40d34d872-959c-47e3-a258-b0116a3255195823308f-7040-4d76-b1e0-e6cb96d3bff7ab6cb997-beff-4667-a577-bed16dbe00800f78e31d-b487-478e-8b1d-2c4b1df42ae828930fb6-f8e6-4aa5-bae2-9d484dcf92138c9782aa-4dd3-4f44-b732-4f98854c297a1d243878-89bc-4d25-b63a-5ef5db89d8e0f450e7f9-7c08-45f6-9cad-e7761ad4468916a3081b-6f6b-4532-ba87-778c35b71d8a2d996a10-68c6-43a0-84dd-70cddf30e2c5c03c9dc2-cdcf-4363-af1b-0cd1d1f9bf70194747786001d08f79e-e597-44e3-b91c-57e30236d45e653dcbf6-174e-4ccc-8cea-a0ba096c45ba2f39b598-6c95-403a-886a-c41c0128c8185bcc6f2b-dcfa-448e-9260-2ee6ba538e54ea9de8b5-b110-4880-bbc0-4de6ab6e4844e6c8677e-63c3-4042-9f66-e3575ea204b2e3ef5e73-fb0e-4179-a730-1e8b562268efc4f060b2-855f-49e9-a79f-ca59c208f58276269604-8bf6-4b44-95a2-3c86bc21455e455295d1-8afd-48f0-b729-c9b5ba2e4bfde5109ef5-94e9-40c7-8ba7-0fa61ed2fb80feb74d21-b8af-4c2f-a32d-b298302d07996ab79466-e43a-46b2-b6c5-9a5c954323265885e67a-3d90-4e42-8e97-390c2f9a0470ad2e548e-8f9d-4d23-9768-9faa99f3fd832020-05-25T23:56:20Z2020-05-25T23:56:20Z2011Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 European-derived, 547 Hispanic, 1590 African-American and 1191 Asian lupus patients were genotyped for 16 confirmed lupus susceptibility loci. Ancestry informative markers were genotyped to calculate and adjust for admixture. The association between the risk allele in each locus was determined and compared in patients with and without the various clinical manifestations included in the ACR criteria. Results: Renal disorder was significantly correlated with the lupus risk allele in ITGAM (p=5.0 × 10-6, OR 1.25, 95% CI 1.12 to 1.35) and in TNFSF4 (p=0.0013, OR 1.14, 95% CI 1.07 to 1.25). Other significant findings include the association between risk alleles in FCGR2A and malar rash (p=0.0031, OR 1.11, 95% CI 1.17 to 1.33), ITGAM and discoid rash (p=0.0020, OR 1.20, 95% CI 1.06 to 1.33), STAT4 and protection from oral ulcers (p=0.0027, OR 0.89, 95% CI 0.83 to 0.96) and IL21 and haematological disorder (p=0.0027, OR 1.13, 95% CI 1.04 to 1.22). All these associations are significant with a false discovery rate of and lt;0.05 and pass the significance threshold using Bonferroni correction for multiple testing. Conclusion: Significant associations were found between lupus clinical manifestations and the FCGR2A, ITGAM, STAT4, TNSF4 and IL21 genes. The findings suggest that genetic profiling might be a useful tool to predict disease manifestations in lupus patients in the future.application/pdfhttps://doi.org/10.1136/ard.2011.1541040003496714682060https://repository.urosario.edu.co/handle/10336/22400eng1757No. 101752Annals of the Rheumatic DiseasesVol. 70Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.70, No.10 (2011); pp. 1752-1757https://www.scopus.com/inward/record.uri?eid=2-s2.0-80052461085&doi=10.1136%2fard.2011.154104&partnerID=40&md5=c76823864585427a58f54f18fbbe7d0bAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURCD11b antigenCytotoxic T lymphocyte antigen 4Fc receptor iiaInterleukin 21IntermedinIntermedin 5Methyl cpg binding protein 2Non receptor protein tyrosine phosphatase 22OX40 ligandProgrammed death 1 receptorSTAT4 proteinUnclassified drugAdultAfrican AmericanArticleAsianDiscoid lupus erythematosusEthnic groupEuropeanFemaleGene frequencyGene locusGenetic predispositionGenetic susceptibilityGenotypeHematologic diseaseHispanicHumanInflammationKidney diseaseMajor clinical studyMaleMouth ulcerNeurologic diseaseOnset agePhenotypePhotosensitivityPriority journalRashSingle nucleotide polymorphismSystemic lupus erythematosusAdultAfrican AmericansAsian Continental Ancestry GroupEuropean Continental Ancestry GroupFemaleGenetic LociGenetic Predisposition to DiseaseGenotypeHumansLupus NephritisMaleMiddle AgedOral UlcerPhenotypeYoung AdultSystemicSingle NucleotideDiscoidLupus ErythematosusLupus ErythematosusPolymorphismPhenotypic associations of genetic susceptibility loci in systemic lupus erythematosusarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Sanchez E.Nadig A.Richardson B.C.Freedman B.I.Kaufman K.M.Kelly J.A.Niewold T.B.Kamen D.L.Gilkeson G.S.Ziegler J.T.Langefeld C.D.Alarcón G.S.Edberg J.C.Ramsey-Goldman R.Petri M.Brown E.E.Kimberly R.P.Reveille J.D.Vilá L.M.Merrill J.T.Anaya, Juan-ManuelJames J.A.Pons-Estel B.A.Martin J.Park S.-Y.Bang S.-Y.Bae S.-C.Moser K.L.Vyse T.J.Criswell L.A.Gaffney P.M.Tsao B.P.Jacob C.O.Harley J.B.Alarcón-Riquelme M.E.Sawalha A.H.10336/22400oai:repository.urosario.edu.co:10336/224002022-05-02 07:37:13.257786https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |