Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus

Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 E...

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Autores:
Tipo de recurso:
Fecha de publicación:
2011
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/22400
Acceso en línea:
https://doi.org/10.1136/ard.2011.154104
https://repository.urosario.edu.co/handle/10336/22400
Palabra clave:
CD11b antigen
Cytotoxic T lymphocyte antigen 4
Fc receptor iia
Interleukin 21
Intermedin
Intermedin 5
Methyl cpg binding protein 2
Non receptor protein tyrosine phosphatase 22
OX40 ligand
Programmed death 1 receptor
STAT4 protein
Unclassified drug
Adult
African American
Article
Asian
Discoid lupus erythematosus
Ethnic group
European
Female
Gene frequency
Gene locus
Genetic predisposition
Genetic susceptibility
Genotype
Hematologic disease
Hispanic
Human
Inflammation
Kidney disease
Major clinical study
Male
Mouth ulcer
Neurologic disease
Onset age
Phenotype
Photosensitivity
Priority journal
Rash
Single nucleotide polymorphism
Systemic lupus erythematosus
Adult
African Americans
Asian Continental Ancestry Group
European Continental Ancestry Group
Female
Genetic Loci
Genetic Predisposition to Disease
Genotype
Humans
Lupus Nephritis
Male
Middle Aged
Oral Ulcer
Phenotype
Young Adult
Systemic
Single Nucleotide
Discoid
Lupus Erythematosus
Lupus Erythematosus
Polymorphism
Rights
License
Abierto (Texto Completo)
id EDOCUR2_1fb97a241029673464875aac9826f0cb
oai_identifier_str oai:repository.urosario.edu.co:10336/22400
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
dc.title.spa.fl_str_mv Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
title Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
spellingShingle Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
CD11b antigen
Cytotoxic T lymphocyte antigen 4
Fc receptor iia
Interleukin 21
Intermedin
Intermedin 5
Methyl cpg binding protein 2
Non receptor protein tyrosine phosphatase 22
OX40 ligand
Programmed death 1 receptor
STAT4 protein
Unclassified drug
Adult
African American
Article
Asian
Discoid lupus erythematosus
Ethnic group
European
Female
Gene frequency
Gene locus
Genetic predisposition
Genetic susceptibility
Genotype
Hematologic disease
Hispanic
Human
Inflammation
Kidney disease
Major clinical study
Male
Mouth ulcer
Neurologic disease
Onset age
Phenotype
Photosensitivity
Priority journal
Rash
Single nucleotide polymorphism
Systemic lupus erythematosus
Adult
African Americans
Asian Continental Ancestry Group
European Continental Ancestry Group
Female
Genetic Loci
Genetic Predisposition to Disease
Genotype
Humans
Lupus Nephritis
Male
Middle Aged
Oral Ulcer
Phenotype
Young Adult
Systemic
Single Nucleotide
Discoid
Lupus Erythematosus
Lupus Erythematosus
Polymorphism
title_short Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
title_full Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
title_fullStr Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
title_full_unstemmed Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
title_sort Phenotypic associations of genetic susceptibility loci in systemic lupus erythematosus
dc.subject.keyword.spa.fl_str_mv CD11b antigen
Cytotoxic T lymphocyte antigen 4
Fc receptor iia
Interleukin 21
Intermedin
Intermedin 5
Methyl cpg binding protein 2
Non receptor protein tyrosine phosphatase 22
OX40 ligand
Programmed death 1 receptor
STAT4 protein
Unclassified drug
Adult
African American
Article
Asian
Discoid lupus erythematosus
Ethnic group
European
Female
Gene frequency
Gene locus
Genetic predisposition
Genetic susceptibility
Genotype
Hematologic disease
Hispanic
Human
Inflammation
Kidney disease
Major clinical study
Male
Mouth ulcer
Neurologic disease
Onset age
Phenotype
Photosensitivity
Priority journal
Rash
Single nucleotide polymorphism
Systemic lupus erythematosus
Adult
African Americans
Asian Continental Ancestry Group
European Continental Ancestry Group
Female
Genetic Loci
Genetic Predisposition to Disease
Genotype
Humans
Lupus Nephritis
Male
Middle Aged
Oral Ulcer
Phenotype
Young Adult
topic CD11b antigen
Cytotoxic T lymphocyte antigen 4
Fc receptor iia
Interleukin 21
Intermedin
Intermedin 5
Methyl cpg binding protein 2
Non receptor protein tyrosine phosphatase 22
OX40 ligand
Programmed death 1 receptor
STAT4 protein
Unclassified drug
Adult
African American
Article
Asian
Discoid lupus erythematosus
Ethnic group
European
Female
Gene frequency
Gene locus
Genetic predisposition
Genetic susceptibility
Genotype
Hematologic disease
Hispanic
Human
Inflammation
Kidney disease
Major clinical study
Male
Mouth ulcer
Neurologic disease
Onset age
Phenotype
Photosensitivity
Priority journal
Rash
Single nucleotide polymorphism
Systemic lupus erythematosus
Adult
African Americans
Asian Continental Ancestry Group
European Continental Ancestry Group
Female
Genetic Loci
Genetic Predisposition to Disease
Genotype
Humans
Lupus Nephritis
Male
Middle Aged
Oral Ulcer
Phenotype
Young Adult
Systemic
Single Nucleotide
Discoid
Lupus Erythematosus
Lupus Erythematosus
Polymorphism
dc.subject.keyword.eng.fl_str_mv Systemic
Single Nucleotide
Discoid
Lupus Erythematosus
Lupus Erythematosus
Polymorphism
description Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 European-derived, 547 Hispanic, 1590 African-American and 1191 Asian lupus patients were genotyped for 16 confirmed lupus susceptibility loci. Ancestry informative markers were genotyped to calculate and adjust for admixture. The association between the risk allele in each locus was determined and compared in patients with and without the various clinical manifestations included in the ACR criteria. Results: Renal disorder was significantly correlated with the lupus risk allele in ITGAM (p=5.0 × 10-6, OR 1.25, 95% CI 1.12 to 1.35) and in TNFSF4 (p=0.0013, OR 1.14, 95% CI 1.07 to 1.25). Other significant findings include the association between risk alleles in FCGR2A and malar rash (p=0.0031, OR 1.11, 95% CI 1.17 to 1.33), ITGAM and discoid rash (p=0.0020, OR 1.20, 95% CI 1.06 to 1.33), STAT4 and protection from oral ulcers (p=0.0027, OR 0.89, 95% CI 0.83 to 0.96) and IL21 and haematological disorder (p=0.0027, OR 1.13, 95% CI 1.04 to 1.22). All these associations are significant with a false discovery rate of and lt;0.05 and pass the significance threshold using Bonferroni correction for multiple testing. Conclusion: Significant associations were found between lupus clinical manifestations and the FCGR2A, ITGAM, STAT4, TNSF4 and IL21 genes. The findings suggest that genetic profiling might be a useful tool to predict disease manifestations in lupus patients in the future.
publishDate 2011
dc.date.created.spa.fl_str_mv 2011
dc.date.accessioned.none.fl_str_mv 2020-05-25T23:56:20Z
dc.date.available.none.fl_str_mv 2020-05-25T23:56:20Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1136/ard.2011.154104
dc.identifier.issn.none.fl_str_mv 00034967
14682060
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/22400
url https://doi.org/10.1136/ard.2011.154104
https://repository.urosario.edu.co/handle/10336/22400
identifier_str_mv 00034967
14682060
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 1757
dc.relation.citationIssue.none.fl_str_mv No. 10
dc.relation.citationStartPage.none.fl_str_mv 1752
dc.relation.citationTitle.none.fl_str_mv Annals of the Rheumatic Diseases
dc.relation.citationVolume.none.fl_str_mv Vol. 70
dc.relation.ispartof.spa.fl_str_mv Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.70, No.10 (2011); pp. 1752-1757
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-80052461085&doi=10.1136%2fard.2011.154104&partnerID=40&md5=c76823864585427a58f54f18fbbe7d0b
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
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spelling 00acf8db-8603-47a3-b350-6935efd9f52cec3482a1-b1c0-4202-99cd-8d044fc9f071c9806c7b-ee41-43bf-9d77-36cfcbd598f12c1a571c-3410-4f60-a580-17327c63a0aa40272400-4936-42de-a624-7840e79e1e9f25992029-f040-4490-8273-14ecb1e009b2bed12cc1-91ea-4542-8f9f-bdff08c065833abb7dff-57eb-4dc5-865d-00335072cbae650495dc-1bb8-4baa-a757-5e8405756ff40d34d872-959c-47e3-a258-b0116a3255195823308f-7040-4d76-b1e0-e6cb96d3bff7ab6cb997-beff-4667-a577-bed16dbe00800f78e31d-b487-478e-8b1d-2c4b1df42ae828930fb6-f8e6-4aa5-bae2-9d484dcf92138c9782aa-4dd3-4f44-b732-4f98854c297a1d243878-89bc-4d25-b63a-5ef5db89d8e0f450e7f9-7c08-45f6-9cad-e7761ad4468916a3081b-6f6b-4532-ba87-778c35b71d8a2d996a10-68c6-43a0-84dd-70cddf30e2c5c03c9dc2-cdcf-4363-af1b-0cd1d1f9bf70194747786001d08f79e-e597-44e3-b91c-57e30236d45e653dcbf6-174e-4ccc-8cea-a0ba096c45ba2f39b598-6c95-403a-886a-c41c0128c8185bcc6f2b-dcfa-448e-9260-2ee6ba538e54ea9de8b5-b110-4880-bbc0-4de6ab6e4844e6c8677e-63c3-4042-9f66-e3575ea204b2e3ef5e73-fb0e-4179-a730-1e8b562268efc4f060b2-855f-49e9-a79f-ca59c208f58276269604-8bf6-4b44-95a2-3c86bc21455e455295d1-8afd-48f0-b729-c9b5ba2e4bfde5109ef5-94e9-40c7-8ba7-0fa61ed2fb80feb74d21-b8af-4c2f-a32d-b298302d07996ab79466-e43a-46b2-b6c5-9a5c954323265885e67a-3d90-4e42-8e97-390c2f9a0470ad2e548e-8f9d-4d23-9768-9faa99f3fd832020-05-25T23:56:20Z2020-05-25T23:56:20Z2011Objective: Systemic lupus erythematosus is a clinically heterogeneous autoimmune disease. A number of genetic loci that increase lupus susceptibility have been established. This study examines if these genetic loci also contribute to the clinical heterogeneity in lupus. Materials and methods: 4001 European-derived, 547 Hispanic, 1590 African-American and 1191 Asian lupus patients were genotyped for 16 confirmed lupus susceptibility loci. Ancestry informative markers were genotyped to calculate and adjust for admixture. The association between the risk allele in each locus was determined and compared in patients with and without the various clinical manifestations included in the ACR criteria. Results: Renal disorder was significantly correlated with the lupus risk allele in ITGAM (p=5.0 × 10-6, OR 1.25, 95% CI 1.12 to 1.35) and in TNFSF4 (p=0.0013, OR 1.14, 95% CI 1.07 to 1.25). Other significant findings include the association between risk alleles in FCGR2A and malar rash (p=0.0031, OR 1.11, 95% CI 1.17 to 1.33), ITGAM and discoid rash (p=0.0020, OR 1.20, 95% CI 1.06 to 1.33), STAT4 and protection from oral ulcers (p=0.0027, OR 0.89, 95% CI 0.83 to 0.96) and IL21 and haematological disorder (p=0.0027, OR 1.13, 95% CI 1.04 to 1.22). All these associations are significant with a false discovery rate of and lt;0.05 and pass the significance threshold using Bonferroni correction for multiple testing. Conclusion: Significant associations were found between lupus clinical manifestations and the FCGR2A, ITGAM, STAT4, TNSF4 and IL21 genes. The findings suggest that genetic profiling might be a useful tool to predict disease manifestations in lupus patients in the future.application/pdfhttps://doi.org/10.1136/ard.2011.1541040003496714682060https://repository.urosario.edu.co/handle/10336/22400eng1757No. 101752Annals of the Rheumatic DiseasesVol. 70Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.70, No.10 (2011); pp. 1752-1757https://www.scopus.com/inward/record.uri?eid=2-s2.0-80052461085&doi=10.1136%2fard.2011.154104&partnerID=40&md5=c76823864585427a58f54f18fbbe7d0bAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURCD11b antigenCytotoxic T lymphocyte antigen 4Fc receptor iiaInterleukin 21IntermedinIntermedin 5Methyl cpg binding protein 2Non receptor protein tyrosine phosphatase 22OX40 ligandProgrammed death 1 receptorSTAT4 proteinUnclassified drugAdultAfrican AmericanArticleAsianDiscoid lupus erythematosusEthnic groupEuropeanFemaleGene frequencyGene locusGenetic predispositionGenetic susceptibilityGenotypeHematologic diseaseHispanicHumanInflammationKidney diseaseMajor clinical studyMaleMouth ulcerNeurologic diseaseOnset agePhenotypePhotosensitivityPriority journalRashSingle nucleotide polymorphismSystemic lupus erythematosusAdultAfrican AmericansAsian Continental Ancestry GroupEuropean Continental Ancestry GroupFemaleGenetic LociGenetic Predisposition to DiseaseGenotypeHumansLupus NephritisMaleMiddle AgedOral UlcerPhenotypeYoung AdultSystemicSingle NucleotideDiscoidLupus ErythematosusLupus ErythematosusPolymorphismPhenotypic associations of genetic susceptibility loci in systemic lupus erythematosusarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Sanchez E.Nadig A.Richardson B.C.Freedman B.I.Kaufman K.M.Kelly J.A.Niewold T.B.Kamen D.L.Gilkeson G.S.Ziegler J.T.Langefeld C.D.Alarcón G.S.Edberg J.C.Ramsey-Goldman R.Petri M.Brown E.E.Kimberly R.P.Reveille J.D.Vilá L.M.Merrill J.T.Anaya, Juan-ManuelJames J.A.Pons-Estel B.A.Martin J.Park S.-Y.Bang S.-Y.Bae S.-C.Moser K.L.Vyse T.J.Criswell L.A.Gaffney P.M.Tsao B.P.Jacob C.O.Harley J.B.Alarcón-Riquelme M.E.Sawalha A.H.10336/22400oai:repository.urosario.edu.co:10336/224002022-05-02 07:37:13.257786https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co