Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1
Non-coding RNAs are a complex class of nucleic acids, with growing evidence supporting regulatory roles in gene expression. Here we identify a non-coding RNA located head-to-head with the gene encoding the Glioma-associated oncogene 1 (GLI1), a transcriptional effector of multiple cancer-associated...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2014
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/18719
- Acceso en línea:
- http://repository.urosario.edu.co/handle/10336/18719
- Palabra clave:
- Cancer
Chromatin
Gene Expression
Gli1
Non-Coding Rna
Transcription
Complementary Rna
Protein Patched 1
Protein Patched 2
Rna Polymerase Ii
Small Interfering Rna
Sonic Hedgehog Protein
Transcription Factor Gli1
Untranslated Rna
Chromatin
Gli Protein
Oncoprotein
Rna Polymerase Ii
Sonic Hedgehog Protein
Transactivator Protein
Transforming Growth Factor Beta
Untranslated Rna
Transforming Growth Factor Beta
Article
Breast Cancer
Breast Fibroadenoma
Cancer Cell
Cell Proliferation
Chromatin Assembly And Disassembly
Chromatin Immunoprecipitation
Chromatin Structure
Chromosome 21Q
Comparative Study
Controlled Study
Down Regulation
Exon
Gene Expression
Gene Silencing
Genetic Transfection
Human
Human Tissue
Negative Feedback
Nucleotide Sequence
Oncogene
Polyadenylation
Priority Journal
Promoter Region
Regulatory Mechanism
Rna Sequence
Signal Transduction
Transcription Initiation Site
Tumor Growth
Upregulation
Chromatin
Gene Expression Regulation
Genetics
Metabolism
Neoplasm
Pathology
Transcription Initiation
Tumor Cell Line
Article
Genetic Transcription
Human Cell
Erinaceidae
Cell Line, Tumor
Chromatin
Gene Expression Regulation, Neoplastic
Hedgehog Proteins
Humans
Neoplasms
Oncogene Proteins
Rna Polymerase Ii
Rna, Untranslated
Signal Transduction
Trans-Activators
Transcriptional Activation
Transforming Growth Factor Beta
Cromatina
Expresión genética
Cáncer
- Rights
- License
- Abierto (Texto Completo)
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|
dc.title.spa.fl_str_mv |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
title |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
spellingShingle |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 Cancer Chromatin Gene Expression Gli1 Non-Coding Rna Transcription Complementary Rna Protein Patched 1 Protein Patched 2 Rna Polymerase Ii Small Interfering Rna Sonic Hedgehog Protein Transcription Factor Gli1 Untranslated Rna Chromatin Gli Protein Oncoprotein Rna Polymerase Ii Sonic Hedgehog Protein Transactivator Protein Transforming Growth Factor Beta Untranslated Rna Transforming Growth Factor Beta Article Breast Cancer Breast Fibroadenoma Cancer Cell Cell Proliferation Chromatin Assembly And Disassembly Chromatin Immunoprecipitation Chromatin Structure Chromosome 21Q Comparative Study Controlled Study Down Regulation Exon Gene Expression Gene Silencing Genetic Transfection Human Human Tissue Negative Feedback Nucleotide Sequence Oncogene Polyadenylation Priority Journal Promoter Region Regulatory Mechanism Rna Sequence Signal Transduction Transcription Initiation Site Tumor Growth Upregulation Chromatin Gene Expression Regulation Genetics Metabolism Neoplasm Pathology Transcription Initiation Tumor Cell Line Article Genetic Transcription Human Cell Erinaceidae Cell Line, Tumor Chromatin Gene Expression Regulation, Neoplastic Hedgehog Proteins Humans Neoplasms Oncogene Proteins Rna Polymerase Ii Rna, Untranslated Signal Transduction Trans-Activators Transcriptional Activation Transforming Growth Factor Beta Cromatina Expresión genética Cáncer |
title_short |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
title_full |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
title_fullStr |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
title_full_unstemmed |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
title_sort |
Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1 |
dc.subject.spa.fl_str_mv |
Cancer Chromatin Gene Expression Gli1 Non-Coding Rna Transcription |
topic |
Cancer Chromatin Gene Expression Gli1 Non-Coding Rna Transcription Complementary Rna Protein Patched 1 Protein Patched 2 Rna Polymerase Ii Small Interfering Rna Sonic Hedgehog Protein Transcription Factor Gli1 Untranslated Rna Chromatin Gli Protein Oncoprotein Rna Polymerase Ii Sonic Hedgehog Protein Transactivator Protein Transforming Growth Factor Beta Untranslated Rna Transforming Growth Factor Beta Article Breast Cancer Breast Fibroadenoma Cancer Cell Cell Proliferation Chromatin Assembly And Disassembly Chromatin Immunoprecipitation Chromatin Structure Chromosome 21Q Comparative Study Controlled Study Down Regulation Exon Gene Expression Gene Silencing Genetic Transfection Human Human Tissue Negative Feedback Nucleotide Sequence Oncogene Polyadenylation Priority Journal Promoter Region Regulatory Mechanism Rna Sequence Signal Transduction Transcription Initiation Site Tumor Growth Upregulation Chromatin Gene Expression Regulation Genetics Metabolism Neoplasm Pathology Transcription Initiation Tumor Cell Line Article Genetic Transcription Human Cell Erinaceidae Cell Line, Tumor Chromatin Gene Expression Regulation, Neoplastic Hedgehog Proteins Humans Neoplasms Oncogene Proteins Rna Polymerase Ii Rna, Untranslated Signal Transduction Trans-Activators Transcriptional Activation Transforming Growth Factor Beta Cromatina Expresión genética Cáncer |
dc.subject.decs.spa.fl_str_mv |
Complementary Rna Protein Patched 1 Protein Patched 2 Rna Polymerase Ii Small Interfering Rna Sonic Hedgehog Protein Transcription Factor Gli1 Untranslated Rna Chromatin Gli Protein Oncoprotein Rna Polymerase Ii Sonic Hedgehog Protein Transactivator Protein Transforming Growth Factor Beta Untranslated Rna Transforming Growth Factor Beta Article Breast Cancer Breast Fibroadenoma Cancer Cell Cell Proliferation Chromatin Assembly And Disassembly Chromatin Immunoprecipitation Chromatin Structure Chromosome 21Q Comparative Study Controlled Study Down Regulation Exon Gene Expression Gene Silencing Genetic Transfection Human Human Tissue Negative Feedback Nucleotide Sequence Oncogene Polyadenylation Priority Journal Promoter Region Regulatory Mechanism Rna Sequence Signal Transduction Transcription Initiation Site Tumor Growth Upregulation Chromatin Gene Expression Regulation Genetics Metabolism Neoplasm Pathology Transcription Initiation Tumor Cell Line Article Genetic Transcription Human Cell Erinaceidae Cell Line, Tumor Chromatin Gene Expression Regulation, Neoplastic Hedgehog Proteins Humans Neoplasms Oncogene Proteins Rna Polymerase Ii Rna, Untranslated Signal Transduction Trans-Activators Transcriptional Activation Transforming Growth Factor Beta |
dc.subject.lemb.spa.fl_str_mv |
Cromatina Expresión genética Cáncer |
description |
Non-coding RNAs are a complex class of nucleic acids, with growing evidence supporting regulatory roles in gene expression. Here we identify a non-coding RNA located head-to-head with the gene encoding the Glioma-associated oncogene 1 (GLI1), a transcriptional effector of multiple cancer-associated signaling pathways. The expression of this three-exon GLI1 antisense (GLI1AS) RNA in cancer cells was concordant with GLI1 levels. siRNAs knockdown of GLI1AS up-regulated GLI1 and increased cellular proliferation and tumor growth in a xenograft model system. Conversely, GLI1AS overexpression decreased the levels of GLI1, its target genes PTCH1 and PTCH2, and cellular proliferation. Additionally, we demonstrate that GLI1 knockdown reduced GLI1AS, while GLI1 overexpression increased GLI1AS, supporting the role of GLI1AS as a target gene of the GLI1 transcription factor. Activation of TGFβ and Hedgehog signaling, two known regulators of GLI1 expression, conferred a concordant up-regulation of GLI1 and GLI1AS in cancer cells. Finally, analysis of the mechanism underlying the interplay between GLI1 and GLI1AS indicates that the non-coding RNA elicits a local alteration of chromatin structure by increasing the silencing mark H3K27me3 and decreasing the recruitment of RNA polymerase II to this locus. Taken together, the data demonstrate the existence of a novel non-coding RNA-based negative feedback loop controlling GLI1 levels, thus expanding the repertoire of mechanisms regulating the expression of this oncogenic transcription factor © 2014 Federation of European Biochemical Societies. |
publishDate |
2014 |
dc.date.created.none.fl_str_mv |
2014 |
dc.date.issued.none.fl_str_mv |
2014 |
dc.date.accessioned.none.fl_str_mv |
2018-11-21T16:32:41Z |
dc.date.available.none.fl_str_mv |
2018-11-21T16:32:41Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.issn.none.fl_str_mv |
ISSN 1574-7891 |
dc.identifier.uri.none.fl_str_mv |
http://repository.urosario.edu.co/handle/10336/18719 |
identifier_str_mv |
ISSN 1574-7891 |
url |
http://repository.urosario.edu.co/handle/10336/18719 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
926 |
dc.relation.citationIssue.none.fl_str_mv |
No. 5 |
dc.relation.citationStartPage.none.fl_str_mv |
912 |
dc.relation.citationTitle.none.fl_str_mv |
Molecular Oncology |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 8 |
dc.relation.ispartof.spa.fl_str_mv |
Molecular Oncology, ISSN: 1574-7891, Vol. 8/No. 5 (2014) pp. 912-926 |
dc.relation.uri.spa.fl_str_mv |
https://febs.onlinelibrary.wiley.com/doi/epdf/10.1016/j.molonc.2014.03.009 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
dc.rights.cc.spa.fl_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
rights_invalid_str_mv |
Abierto (Texto Completo) https://creativecommons.org/licenses/by-nc-nd/4.0/ http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
institution |
Universidad del Rosario |
dc.source.bibliographicCitation.spa.fl_str_mv |
Berretta, J., Pinskaya, M., Morillon, A., A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae (2008) Genes Dev., 22, pp. 615-626 |
dc.source.instname.none.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.none.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
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The expression of this three-exon GLI1 antisense (GLI1AS) RNA in cancer cells was concordant with GLI1 levels. siRNAs knockdown of GLI1AS up-regulated GLI1 and increased cellular proliferation and tumor growth in a xenograft model system. Conversely, GLI1AS overexpression decreased the levels of GLI1, its target genes PTCH1 and PTCH2, and cellular proliferation. Additionally, we demonstrate that GLI1 knockdown reduced GLI1AS, while GLI1 overexpression increased GLI1AS, supporting the role of GLI1AS as a target gene of the GLI1 transcription factor. Activation of TGFβ and Hedgehog signaling, two known regulators of GLI1 expression, conferred a concordant up-regulation of GLI1 and GLI1AS in cancer cells. Finally, analysis of the mechanism underlying the interplay between GLI1 and GLI1AS indicates that the non-coding RNA elicits a local alteration of chromatin structure by increasing the silencing mark H3K27me3 and decreasing the recruitment of RNA polymerase II to this locus. Taken together, the data demonstrate the existence of a novel non-coding RNA-based negative feedback loop controlling GLI1 levels, thus expanding the repertoire of mechanisms regulating the expression of this oncogenic transcription factor © 2014 Federation of European Biochemical Societies.application/pdfISSN 1574-7891http://repository.urosario.edu.co/handle/10336/18719eng926No. 5912Molecular OncologyVol. 8Molecular Oncology, ISSN: 1574-7891, Vol. 8/No. 5 (2014) pp. 912-926https://febs.onlinelibrary.wiley.com/doi/epdf/10.1016/j.molonc.2014.03.009Abierto (Texto Completo)https://creativecommons.org/licenses/by-nc-nd/4.0/http://purl.org/coar/access_right/c_abf2Berretta, J., Pinskaya, M., Morillon, A., A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae (2008) Genes Dev., 22, pp. 615-626instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURCancerChromatinGene ExpressionGli1Non-Coding RnaTranscriptionComplementary RnaProtein Patched 1Protein Patched 2Rna Polymerase IiSmall Interfering RnaSonic Hedgehog ProteinTranscription Factor Gli1Untranslated RnaChromatinGli ProteinOncoproteinRna Polymerase IiSonic Hedgehog ProteinTransactivator ProteinTransforming Growth Factor BetaUntranslated RnaTransforming Growth Factor BetaArticleBreast CancerBreast FibroadenomaCancer CellCell ProliferationChromatin Assembly And DisassemblyChromatin ImmunoprecipitationChromatin StructureChromosome 21QComparative StudyControlled StudyDown RegulationExonGene ExpressionGene SilencingGenetic TransfectionHumanHuman TissueNegative FeedbackNucleotide SequenceOncogenePolyadenylationPriority JournalPromoter RegionRegulatory MechanismRna SequenceSignal TransductionTranscription Initiation SiteTumor GrowthUpregulationChromatinGene Expression RegulationGeneticsMetabolismNeoplasmPathologyTranscription InitiationTumor Cell LineArticleGenetic TranscriptionHuman CellErinaceidaeCell Line, TumorChromatinGene Expression Regulation, NeoplasticHedgehog ProteinsHumansNeoplasmsOncogene ProteinsRna Polymerase IiRna, UntranslatedSignal TransductionTrans-ActivatorsTranscriptional ActivationTransforming Growth Factor BetaCromatinaExpresión genéticaCáncerIdentification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1articleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Villegas Gálvez, Victoria EugeniaRahman, Mohammed Ferdous-UrFernandez-Barrena, Maite G.Diao, YumeiLiapi, EleniSonkoly, EnikoStahle, MonaPivarcsi, AndorAnnaratone, LauraSapino, AnnaRamírez Clavijo, Sandra RocíoBurglin, Thomas R.Shimokawa, TakashiRamachandran, SaraswathiKapranov, PhilippFernandez-Zapico, Martin E.Zaphiropoulos, Peter G.Villegas, Victoria E.Rahman, Mohammed Ferdous-UrFernandez-Barrena, Maite G.Diao, YumeiLiapi, EleniSonkoly, EnikoSonkoly, EnikoRamırez Clavijo, SandraShimokawa, TakashiRamachandran, SaraswathiKapranov, PhilippFernandez-Zapico, Martin E.Zaphiropoulos, Peter G.ORIGINAL124.pdfapplication/pdf2260649https://repository.urosario.edu.co/bitstreams/10faa6fc-1d19-42fe-a2a1-eaf1bedc0c3c/downloadb51b8f825c2bcb6a507105d3bf6c33f2MD51TEXT124.pdf.txt124.pdf.txtExtracted texttext/plain59532https://repository.urosario.edu.co/bitstreams/da298855-5920-4232-9b09-ae633ea7a736/downloada6f22c1be29730ab5f4850a0555b177cMD52THUMBNAIL124.pdf.jpg124.pdf.jpgGenerated Thumbnailimage/jpeg4633https://repository.urosario.edu.co/bitstreams/bb8fe938-86a2-4ec2-9c04-416aca9628d3/downloadd46a3454720d5904b0ee024e8d404ca4MD5310336/18719oai:repository.urosario.edu.co:10336/187192019-09-19 07:38:03.190837https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |