Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases

Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association w...

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Autores:
Tipo de recurso:
Fecha de publicación:
2012
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/23144
Acceso en línea:
https://doi.org/10.1016/j.autrev.2011.07.007
https://repository.urosario.edu.co/handle/10336/23144
Palabra clave:
Alpha integrin
Alpha integrin m
Unclassified drug
Autoimmune disease
Celiac disease
Ethnicity
Genetic association
Genetic variability
Genotype
Human
Insulin dependent diabetes mellitus
Juvenile rheumatoid arthritis
Power analysis
Review
Rheumatoid arthritis
Risk
Single nucleotide polymorphism
Sjoegren syndrome
Statistical analysis
Systemic lupus erythematosus
Systemic sclerosis
Autoimmune diseases
Dna mutational analysis
Europe
Gene frequency
Genetic association studies
Genetic predisposition to disease
Genotype
Humans
Latin america
Autoimmune diseases
Genetic susceptibility
Itgam
single nucleotide
cd11b
Antigens
Polymorphism
Rights
License
Abierto (Texto Completo)
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network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
spelling 194747786005a1d2b19-ce5a-49e8-bd50-6bd90a8463c6eb05bd16-a2ac-4a02-86ba-4a15c0ef332ef84136d5-8bb0-4fb2-a57c-774823df9cb9c919c968-8439-4d2c-917d-c5c70d8cb3e652249701d8261184-c78a-4284-926b-d050390d9ac939f5f63d-d50a-4890-bb9a-00b5ef0fc87820c80a39-7e7d-4a21-a092-a72119111d1fd86ffd96-36f9-42fb-914b-38ee462872aefd1b6ed6-f2d7-408e-b8d3-5fc5141b64633568b65a-bc38-49f5-b7fa-4291ae155adb8413200a-d245-4a47-9bf8-a656d5ac34ae7db99122-14fd-4cf7-8433-c6ea25aac95341f8164b-3ecf-4dc5-ad77-a3580104bd352020-05-26T00:00:00Z2020-05-26T00:00:00Z2012Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p meta=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis. © 2011 Elsevier B.V.application/pdfhttps://doi.org/10.1016/j.autrev.2011.07.00715689972https://repository.urosario.edu.co/handle/10336/23144eng280No. 4276Autoimmunity ReviewsVol. 11Autoimmunity Reviews, ISSN:15689972, Vol.11, No.4 (2012); pp. 276-280https://www.scopus.com/inward/record.uri?eid=2-s2.0-84857037528&doi=10.1016%2fj.autrev.2011.07.007&partnerID=40&md5=e13296d2d09494949a86b3e96a275f5dAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURAlpha integrinAlpha integrin mUnclassified drugAutoimmune diseaseCeliac diseaseEthnicityGenetic associationGenetic variabilityGenotypeHumanInsulin dependent diabetes mellitusJuvenile rheumatoid arthritisPower analysisReviewRheumatoid arthritisRiskSingle nucleotide polymorphismSjoegren syndromeStatistical analysisSystemic lupus erythematosusSystemic sclerosisAutoimmune diseasesDna mutational analysisEuropeGene frequencyGenetic association studiesGenetic predisposition to diseaseGenotypeHumansLatin americaAutoimmune diseasesGenetic susceptibilityItgamsingle nucleotidecd11bAntigensPolymorphismEvaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseasesarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Anaya, Juan-ManuelKim-Howard, XanaPrahalad, SampathCherñavsky, AlejandraCañas, CarlosRojas-Villarraga, AdrianaBohnsack, JohnJonsson, RolandBolstad, Anne IsineBrun, Johan G.Cobb, BethMoser, Kathy L.James, Judith A.Harley, John B.Nath, Swapan K.10336/23144oai:repository.urosario.edu.co:10336/231442022-05-02 07:37:13.580019https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
title Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
spellingShingle Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
Alpha integrin
Alpha integrin m
Unclassified drug
Autoimmune disease
Celiac disease
Ethnicity
Genetic association
Genetic variability
Genotype
Human
Insulin dependent diabetes mellitus
Juvenile rheumatoid arthritis
Power analysis
Review
Rheumatoid arthritis
Risk
Single nucleotide polymorphism
Sjoegren syndrome
Statistical analysis
Systemic lupus erythematosus
Systemic sclerosis
Autoimmune diseases
Dna mutational analysis
Europe
Gene frequency
Genetic association studies
Genetic predisposition to disease
Genotype
Humans
Latin america
Autoimmune diseases
Genetic susceptibility
Itgam
single nucleotide
cd11b
Antigens
Polymorphism
title_short Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
title_full Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
title_fullStr Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
title_full_unstemmed Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
title_sort Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases
dc.subject.keyword.spa.fl_str_mv Alpha integrin
Alpha integrin m
Unclassified drug
Autoimmune disease
Celiac disease
Ethnicity
Genetic association
Genetic variability
Genotype
Human
Insulin dependent diabetes mellitus
Juvenile rheumatoid arthritis
Power analysis
Review
Rheumatoid arthritis
Risk
Single nucleotide polymorphism
Sjoegren syndrome
Statistical analysis
Systemic lupus erythematosus
Systemic sclerosis
Autoimmune diseases
Dna mutational analysis
Europe
Gene frequency
Genetic association studies
Genetic predisposition to disease
Genotype
Humans
Latin america
Autoimmune diseases
Genetic susceptibility
Itgam
topic Alpha integrin
Alpha integrin m
Unclassified drug
Autoimmune disease
Celiac disease
Ethnicity
Genetic association
Genetic variability
Genotype
Human
Insulin dependent diabetes mellitus
Juvenile rheumatoid arthritis
Power analysis
Review
Rheumatoid arthritis
Risk
Single nucleotide polymorphism
Sjoegren syndrome
Statistical analysis
Systemic lupus erythematosus
Systemic sclerosis
Autoimmune diseases
Dna mutational analysis
Europe
Gene frequency
Genetic association studies
Genetic predisposition to disease
Genotype
Humans
Latin america
Autoimmune diseases
Genetic susceptibility
Itgam
single nucleotide
cd11b
Antigens
Polymorphism
dc.subject.keyword.eng.fl_str_mv single nucleotide
cd11b
Antigens
Polymorphism
description Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p meta=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis. © 2011 Elsevier B.V.
publishDate 2012
dc.date.created.spa.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:00:00Z
dc.date.available.none.fl_str_mv 2020-05-26T00:00:00Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.autrev.2011.07.007
dc.identifier.issn.none.fl_str_mv 15689972
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/23144
url https://doi.org/10.1016/j.autrev.2011.07.007
https://repository.urosario.edu.co/handle/10336/23144
identifier_str_mv 15689972
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 280
dc.relation.citationIssue.none.fl_str_mv No. 4
dc.relation.citationStartPage.none.fl_str_mv 276
dc.relation.citationTitle.none.fl_str_mv Autoimmunity Reviews
dc.relation.citationVolume.none.fl_str_mv Vol. 11
dc.relation.ispartof.spa.fl_str_mv Autoimmunity Reviews, ISSN:15689972, Vol.11, No.4 (2012); pp. 276-280
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-84857037528&doi=10.1016%2fj.autrev.2011.07.007&partnerID=40&md5=e13296d2d09494949a86b3e96a275f5d
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
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