A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals
Intestinal microbiota facilitates food breakdown for energy metabolism and influences the im-mune response and maintaining mucosal homeostasis. Overall, HIV infection is associated with intestinal dysbiosis and immune activation, which has been related to seroconversion in HIV-exposed individuals. H...
- Autores:
-
Zapata Builes, Wildeman
Lopera, Tulio J.
Lujan, Jorge A.
Zurek, Eduardo
Hernández López, Juan Carlos
Toro, Miguel A.
Alzate, Juan F.
Taborda, Natalia Andrea
Rugeles López, María Teresa
Aguilar Jiménez, Wbeimar
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2021
- Institución:
- Universidad Cooperativa de Colombia
- Repositorio:
- Repositorio UCC
- Idioma:
- OAI Identifier:
- oai:repository.ucc.edu.co:20.500.12494/43603
- Acceso en línea:
- https://hdl.handle.net/20.500.12494/43603
- Palabra clave:
- Intestinal microbiota, richness, HIV-1, HESN, Treg cells
Intestinal microbiota, richness, HIV-1, HESN, Treg cells
- Rights
- openAccess
- License
- Atribución
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oai:repository.ucc.edu.co:20.500.12494/43603 |
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|
dc.title.spa.fl_str_mv |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
title |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
spellingShingle |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals Intestinal microbiota, richness, HIV-1, HESN, Treg cells Intestinal microbiota, richness, HIV-1, HESN, Treg cells |
title_short |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
title_full |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
title_fullStr |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
title_full_unstemmed |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
title_sort |
A specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individuals |
dc.creator.fl_str_mv |
Zapata Builes, Wildeman Lopera, Tulio J. Lujan, Jorge A. Zurek, Eduardo Hernández López, Juan Carlos Toro, Miguel A. Alzate, Juan F. Taborda, Natalia Andrea Rugeles López, María Teresa Aguilar Jiménez, Wbeimar |
dc.contributor.author.none.fl_str_mv |
Zapata Builes, Wildeman Lopera, Tulio J. Lujan, Jorge A. Zurek, Eduardo Hernández López, Juan Carlos Toro, Miguel A. Alzate, Juan F. Taborda, Natalia Andrea Rugeles López, María Teresa Aguilar Jiménez, Wbeimar |
dc.subject.spa.fl_str_mv |
Intestinal microbiota, richness, HIV-1, HESN, Treg cells |
topic |
Intestinal microbiota, richness, HIV-1, HESN, Treg cells Intestinal microbiota, richness, HIV-1, HESN, Treg cells |
dc.subject.other.spa.fl_str_mv |
Intestinal microbiota, richness, HIV-1, HESN, Treg cells |
description |
Intestinal microbiota facilitates food breakdown for energy metabolism and influences the im-mune response and maintaining mucosal homeostasis. Overall, HIV infection is associated with intestinal dysbiosis and immune activation, which has been related to seroconversion in HIV-exposed individuals. However, to date, it is unclear whether microbiota dysbiosis is the cause or the effect of immune alterations and disease progression. We characterize the intestinal microbiota and determine its association with immune regulation in HIV-exposed seronegative individuals (HESN), HIV-infected progressors (HIV+), and healthy control (HC) subjects. For this, feces and blood were collected. The microbiota composition of HESN showed a significantly higher alpha and beta diversity compared to HC, but similar to HIV+. A lower Treg percentage was observed in HESN than HC and HIV+, with enrichment of the genus Butyrivibrio being characteristic of this profile. Interestingly, an increase in Succinivibrio and Prevotella and a re-duction in Bacteroides genus were observed in HESN compared to HC, which is typical of HIV-infected individuals. Thus, HESNs have a microbiota profile, similar to that observed in HIV+, most likely because HESN are cohabiting with their HIV+ partners. |
publishDate |
2021 |
dc.date.issued.none.fl_str_mv |
2021-12-02 |
dc.date.accessioned.none.fl_str_mv |
2022-02-02T20:53:49Z |
dc.date.available.none.fl_str_mv |
2022-02-02T20:53:49Z |
dc.type.none.fl_str_mv |
Artículos Científicos |
dc.type.coar.none.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.coarversion.none.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.driver.none.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
publishedVersion |
dc.identifier.issn.spa.fl_str_mv |
1932-6203 |
dc.identifier.uri.spa.fl_str_mv |
10.1371/journal.pone.0260729 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12494/43603 |
dc.identifier.bibliographicCitation.spa.fl_str_mv |
Lopera TJ, Lujan JA, Zurek E, Zapata W, Hernandez JC, Toro MA, et al. (2021) A specific structure and high richness characterize intestinal microbiota of HIV-exposed seronegative individuals. PLoS ONE 16(12): e0260729. https://doi.org/10.1371/journal.pone.0260729. |
identifier_str_mv |
1932-6203 10.1371/journal.pone.0260729 Lopera TJ, Lujan JA, Zurek E, Zapata W, Hernandez JC, Toro MA, et al. (2021) A specific structure and high richness characterize intestinal microbiota of HIV-exposed seronegative individuals. PLoS ONE 16(12): e0260729. https://doi.org/10.1371/journal.pone.0260729. |
url |
https://hdl.handle.net/20.500.12494/43603 |
dc.relation.isversionof.spa.fl_str_mv |
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0260729 |
dc.relation.ispartofjournal.spa.fl_str_mv |
PLOS ONE |
dc.relation.references.spa.fl_str_mv |
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Noguera-Julian M, Rocafort M, Guille n Y, Rivera J, Casadell M, Nowak P, et al. Gut Microbiota Linked to Sexual Preference and HIV Infection. EBioMedicine. 2016; 5: 135–146. https://doi.org/10.1016/j. ebiom.2016.01.032 PMID: 27077120 20. Mitchell C, Balkus JE, Fredricks D, Liu C, McKernan-Mullin J, Frenkel LM, et al. Interaction between lactobacilli, bacterial vaginosis-associated bacteria, and HIV Type 1 RNA and DNA Genital shedding in U. S. and Kenyan women. AIDS Res Hum Retroviruses. 2013; 29: 13–19. https://doi.org/10.1089/AID. 2012.0187 PMID: 23020644 21. Shen R, Smith PD. Mucosal correlates of protection in HIV-1-exposed sero-negative persons. Am J Reprod Immunol. 2014/01/16. 2014; 72: 219–227. https://doi.org/10.1111/aji.12202 PMID: 24428610 22. Mcclelland PRS, Lingappa JR, Srinivasan S, Kinuthia J, John-Stewart GC, Jaoko W, et al. Key Vaginal Bacteria Associated with Increased Risk of HIV Acquisition in African Women: A Nested Case-Control Study. Lancet Infect Dis. 2018; 18: 554–564. https://doi.org/10.1016/S1473-3099(18)30058-6 PMID: 29396006 23. Serna-Ortega PA, Aguilar-Jimenez W, Florez-A lvarez L, Trabattoni D, Rugeles MT, Biasin M. IL-21 is associated with natural resistance to HIV-1 infection in a Colombian HIV exposed seronegative cohort. Microbes Infect. 2020; 22: 371–374. https://doi.org/10.1016/j.micinf.2019.11.002 PMID: 31816393 24. Scepanovic P, Hodel F, Mondot S, Partula V, Byrd A, Hammer C, et al. A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals. Microbiome. 2019; 7: 130. https://doi.org/10.1186/s40168-019-0747-x PMID: 31519223 25. David LA, Maurice CF, Carmody RN, Gootenberg DB, Button JE, Wolfe BE, et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature. 2014; 505: 559–563. https://doi.org/10.1038/ nature12820 PMID: 24336217 26. Nyirenda MH, Sanvito L, Darlington PJ, O’Brien K, Zhang G-X, Constantinescu CS, et al. TLR2 Stimulation Drives Human Naive and Effector Regulatory T Cells into a Th17-Like Phenotype with Reduced Suppressive Function. J Immunol. 2011; 187: 2278 LP– 2290. https://doi.org/10.4049/jimmunol. 1003715 PMID: 21775683 27. Toro-Londono MA, Bedoya-Urrego K, Garcia-Montoya GM, Galvan-Diaz AL, Alzate JF. Intestinal parasitic infection alters bacterial gut microbiota in children. PeerJ. 2019; 7: e6200. https://doi.org/10.7717/ peerj.6200 PMID: 30643702 28. Montoya-Porras LM, Omar T-C, Alzate JF, Moreno-Herrera CX, Cadavid-Restrepo GE. 16S rRNA gene amplicon sequencing reveals dominance of Actinobacteria in Rhodnius pallescens compared to Triatoma maculata midgut microbiota in natural populations of vector insects from Colombia. Acta Trop. 2018; 178: 327–332. https://doi.org/10.1016/j.actatropica.2017.11.004 PMID: 29154947 29. Dhariwal A, Chong J, Habib S, King IL, Agellon LB, Xia J. 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Immunol Res. 2016; 64: 765–774. https://doi. org/10.1007/s12026-015-8775-5 PMID: 26724942 33. Ma L, Xue H-B, Guan X-H, Shu C-M, Wang F, Zhang J-H, et al. The Imbalance of Th17 cells and CD4 +CD25highFoxp3+ Treg cells in patients with atopic dermatitis. J Eur Acad Dermatology Venereol. 2014; 28: 1079–1086. https://doi.org/10.1111/jdv.12288. 34. Li SX, Sen S, Schneider JM, Xiong K-N, Nusbacher NM, Moreno-Huizar N, et al. Gut microbiota from high-risk men who have sex with men drive immune activation in gnotobiotic mice and in vitro HIV infection. PLOS Pathog. 2019; 15: e1007611. Available: https://doi.org/10.1371/journal.ppat.1007611 PMID: 30947289 35. Vesterbacka J, Rivera J, Noyan K, Parera M, Neogi U, Calle M, et al. Richer gut microbiota with distinct metabolic profile in HIV infected Elite Controllers. Sci Rep. 2017; 7: 6269. https://doi.org/10.1038/ s41598-017-06675-1 PMID: 28740260 36. Dill-McFarland KA, Tang Z-Z, Kemis JH, Kerby RL, Chen G, Palloni A, et al. Close social relationships correlate with human gut microbiota composition. Sci Rep. 2019; 9: 703. https://doi.org/10.1038/ s41598-018-37298-9 PMID: 30679677 37. Ron R, Cabello A, Gosalbes MJ, Sa nchez-Conde M, Talavera-Rodrı guez A, Zamora J, et al. Exploiting the Microbiota for the Diagnosis of Anal Precancerous Lesions in Men Who Have Sex With Men. J Infect Dis. 2021. https://doi.org/10.1093/infdis/jiab068 PMID: 33544868 38. Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, et al. Cohabiting family members share microbiota with one another and with their dogs. Elife. 2013; 2: e00458. https://doi.org/ 10.7554/eLife.00458 PMID: 23599893 39. Benning L, Golub ET, Anastos K, French AL, Cohen M, Gilbert D, et al. Comparison of Lower Genital Tract Microbiota in HIV-Infected and Uninfected Women from Rwanda and the US. PLoS One. 2014; 9: e96844. Available: https://doi.org/10.1371/journal.pone.0096844 PMID: 24817204 40. Imahashi M, Ode H, Kobayashi A, Nemoto M, Matsuda M, Hashiba C, et al. Impact of long-term antiretroviral therapy on gut and oral microbiotas in HIV-1-infected patients. Sci Rep. 2021; 11: 960. https:// doi.org/10.1038/s41598-020-80247-8 PMID: 33441754 41. Srinivasan S, Beamer MA, Fiedler TL, Austin MN, SizovaM V, Strenk SM, et al. Megasphaera lornae sp. nov., Megasphaera hutchinsoni sp. nov., and Megasphaera vaginalis sp. nov.: novel bacteria isolated from the female genital tract. Int J Syst Evol Microbiol. 2021; 71. https://doi.org/10.1099/ijsem.0. 004702. 42. Yuille S, Reichardt N, Panda S, Dunbar H, Mulder IE. Human gut bacteria as potent class I histone deacetylase inhibitors in vitro through production of butyric acid and valeric acid. PLoS One. 2018; 13: e0201073. https://doi.org/10.1371/journal.pone.0201073 PMID: 30052654 43. Moon CD, Pacheco DM, Kelly WJ, Leahy SC, Li D, Kopecny J, et al. Reclassification of Clostridium proteoclasticum as Butyrivibrio proteoclasticus comb. nov., a butyrate-producing ruminal bacterium. Int J Syst Evol Microbiol. 2008; 58: 2041–2045. https://doi.org/10.1099/ijs.0.65845-0 PMID: 18768601 44. Zoetendal EG, Plugge CM, Akkermans ADL, de Vos WM. Victivallis vadensis gen. nov., sp. nov., a sugar-fermenting anaerobe from human faeces. Int J Syst Evol Microbiol. 2003; 53: 211–215. https:// doi.org/10.1099/ijs.0.02362-0 PMID: 12656175 45. AM K., KS D., SS B., Jayesh S, Lauren P, Karolina K, et al. Oral and Gut Microbial Diversity and Immune Regulation in Patients with HIV on Antiretroviral Therapy. mSphere. 2021; 5: e00798–19. https://doi.org/10.1128/mSphere.00798-19 PMID: 32024712 46. Luja n JA, Rugeles MT, Taborda NA. Contribution of the Microbiota to Intestinal Homeostasis and its Role in the Pathogenesis of HIV-1 Infection. Curr HIV Res. 2019; 17: 13–25. https://doi.org/10.2174/ 1570162X17666190311114808 PMID: 30854974 47. Falivene J, Ghiglione Y, Laufer N, Socı as ME, Holgado MP, Ruiz MJ, et al. Th17 and Th17/Treg ratio at early HIV infection associate with protective HIV-specific CD8(+) T-cell responses and disease progression. Sci Rep. 2015; 5: 11511. https://doi.org/10.1038/srep11511 PMID: 26099972 48. Card CM, McLaren PJ, Wachihi C, Kimani J, Plummer FA, Fowke KR. Decreased Immune Activation in Resistance to HIV-1 Infection Is Associated with an Elevated Frequency of CD4+CD25+FOXP3+ Regulatory T Cells. J Infect Dis. 2009; 199: 1318–1322. https://doi.org/10.1086/597801 PMID: 19301980 49. Gelpi M, Vestad B, Hansen SH, Holm K, Drivsholm N, Goetz A, et al. Impact of Human Immunodeficiency Virus–Related Gut Microbiota Alterations on Metabolic Comorbid Conditions. Clin Infect Dis. 2020; 71: e359–e367. https://doi.org/10.1093/cid/ciz1235 PMID: 31894240 |
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Aftab A. Ansari, Emory University School of Medicine, UNITED STATES Grupo Infettare, Facultad de Medicina, Universidad Cooperativa de Colombia, Medellin, Colombia |
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Zapata Builes, WildemanLopera, Tulio J.Lujan, Jorge A.Zurek, EduardoHernández López, Juan CarlosToro, Miguel A.Alzate, Juan F.Taborda, Natalia AndreaRugeles López, María TeresaAguilar Jiménez, Wbeimar16(12): e0260729.2022-02-02T20:53:49Z2022-02-02T20:53:49Z2021-12-021932-620310.1371/journal.pone.0260729https://hdl.handle.net/20.500.12494/43603Lopera TJ, Lujan JA, Zurek E, Zapata W, Hernandez JC, Toro MA, et al. (2021) A specific structure and high richness characterize intestinal microbiota of HIV-exposed seronegative individuals. PLoS ONE 16(12): e0260729. https://doi.org/10.1371/journal.pone.0260729.Intestinal microbiota facilitates food breakdown for energy metabolism and influences the im-mune response and maintaining mucosal homeostasis. Overall, HIV infection is associated with intestinal dysbiosis and immune activation, which has been related to seroconversion in HIV-exposed individuals. However, to date, it is unclear whether microbiota dysbiosis is the cause or the effect of immune alterations and disease progression. We characterize the intestinal microbiota and determine its association with immune regulation in HIV-exposed seronegative individuals (HESN), HIV-infected progressors (HIV+), and healthy control (HC) subjects. For this, feces and blood were collected. The microbiota composition of HESN showed a significantly higher alpha and beta diversity compared to HC, but similar to HIV+. A lower Treg percentage was observed in HESN than HC and HIV+, with enrichment of the genus Butyrivibrio being characteristic of this profile. Interestingly, an increase in Succinivibrio and Prevotella and a re-duction in Bacteroides genus were observed in HESN compared to HC, which is typical of HIV-infected individuals. Thus, HESNs have a microbiota profile, similar to that observed in HIV+, most likely because HESN are cohabiting with their HIV+ partners.Intestinal microbiota facilitates food breakdown for energy metabolism and influences the im-mune response and maintaining mucosal homeostasis. Overall, HIV infection is associated with intestinal dysbiosis and immune activation, which has been related to seroconversion in HIV-exposed individuals. However, to date, it is unclear whether microbiota dysbiosis is the cause or the effect of immune alterations and disease progression. We characterize the intestinal microbiota and determine its association with immune regulation in HIV-exposed seronegative individuals (HESN), HIV-infected progressors (HIV+), and healthy control (HC) subjects. For this, feces and blood were collected. The microbiota composition of HESN showed a significantly higher alpha and beta diversity compared to HC, but similar to HIV+. A lower Treg percentage was observed in HESN than HC and HIV+, with enrichment of the genus Butyrivibrio being characteristic of this profile. Interestingly, an increase in Succinivibrio and Prevotella and a re-duction in Bacteroides genus were observed in HESN compared to HC, which is typical of HIV-infected individuals. Thus, HESNs have a microbiota profile, similar to that observed in HIV+, most likely because HESN are cohabiting with their HIV+ partners.https://scienti.minciencias.gov.co/cvlac/EnProdArticulo/query.do?cod_producto=73&cod_rh=0000157775https://orcid.org/0000-0002-7351-8738COL0112548wildeman.zapatab@campusucc.edu.cohttps://scholar.google.com.co/citations?hl=en&user=VLZxl1UAAAAJ14Aftab A. Ansari, Emory University School of Medicine, UNITED STATESGrupo Infettare, Facultad de Medicina, Universidad Cooperativa de Colombia, Medellin, ColombiaMedicinaMedellínhttps://journals.plos.org/plosone/article?id=10.1371/journal.pone.0260729PLOS ONE1. 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Clin Infect Dis. 2020; 71: e359–e367. https://doi.org/10.1093/cid/ciz1235 PMID: 31894240Intestinal microbiota, richness, HIV-1, HESN, Treg cellsIntestinal microbiota, richness, HIV-1, HESN, Treg cellsA specific structure and high richness characterize intestinal microbiota of HIVexposed seronegative individualsArtículos Científicoshttp://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAtribucióninfo:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2PublicationLICENSElicense.txtlicense.txttext/plain; charset=utf-84334https://repository.ucc.edu.co/bitstreams/21fd1873-058d-44d8-b9c4-201ea4241bdd/download3bce4f7ab09dfc588f126e1e36e98a45MD52ORIGINALMicrobiota HESN UCC_UdeA 2021.pdfMicrobiota HESN UCC_UdeA 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