First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.

Canine Circovirus (CanineCV) is an emerging virus which since its first report in USA in 2012, it has been described worldwide. It was the second mammalian circovirus species identified in dogs and its role in canine enteritis is still being uncertain as much as its association in disease with the C...

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Autores:
Giraldo-Ramirez, Sebastian
Rendon-Marin, Santiago
Vargas-Bermudez, Diana S
Jaime, Jairo
Ruiz Saenz, Julian
Tipo de recurso:
Article of journal
Fecha de publicación:
2020
Institución:
Universidad Cooperativa de Colombia
Repositorio:
Repositorio UCC
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OAI Identifier:
oai:repository.ucc.edu.co:20.500.12494/41673
Acceso en línea:
https://doi.org/10.1371/journal.pone.0213425
https://hdl.handle.net/20.500.12494/41673
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http://purl.org/coar/access_right/c_14cb
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network_acronym_str COOPER2
network_name_str Repositorio UCC
repository_id_str
spelling Giraldo-Ramirez, SebastianRendon-Marin, SantiagoVargas-Bermudez, Diana SJaime, JairoRuiz Saenz, Julian2021-12-16T22:15:42Z2021-12-16T22:15:42Z2020https://doi.org/10.1371/journal.pone.021342520452322https://hdl.handle.net/20.500.12494/41673Giraldo S,Rendon S,Vargas DS,Jaime J,Ruiz J. First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America. Sci Rep. 2020. 10. (1):p. 17579-17579. .Canine Circovirus (CanineCV) is an emerging virus which since its first report in USA in 2012, it has been described worldwide. It was the second mammalian circovirus species identified in dogs and its role in canine enteritis is still being uncertain as much as its association in disease with the Canine Parvovirus-2 (CPV-2). Here, we aim to confirm for the first time the presence of CanineCV in Colombia and to develop phylogenetic evolutive analyses of CanineCV in CPV-2 positive animals. DNA from samples were extracted and PCR, full genome sequencing and phylogenetic analysis was performed to detect and characterize CanineCV. From a total of 30 CPV-2 positive samples, 16.6% (n = 5) were positives for CanineCV. Sequencing analysis of Colombian CanineCV wild-type strains displayed high identity to each other (99.5-99.7% nt; 99.7% aa). The full genome phylogenetic analysis confirmed that worldwide reported CanineCV strains were separated into four distinct genotypes in addition to a European origin of the South American CanineCV strains. This study demonstrated the importance of continue surveillance of emerging viruses in canine populations and confirm for the first time the circulation and origin of CanineCV in Colombia.0000-0002-1447-1458julian.ruizs@campusucc.edu.co17579-17579Nature Publishing GroupFirst detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.Artículohttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articlehttp://purl.org/redcol/resource_type/ARTinfo:eu-repo/semantics/publishedVersionSCI REP-UKinfo:eu-repo/semantics/closedAccesshttp://purl.org/coar/access_right/c_14cbPublication20.500.12494/41673oai:repository.ucc.edu.co:20.500.12494/416732024-08-20 16:22:50.809metadata.onlyhttps://repository.ucc.edu.coRepositorio Institucional Universidad Cooperativa de Colombiabdigital@metabiblioteca.com
dc.title.spa.fl_str_mv First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
spellingShingle First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title_short First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title_full First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title_fullStr First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title_full_unstemmed First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
title_sort First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America.
dc.creator.fl_str_mv Giraldo-Ramirez, Sebastian
Rendon-Marin, Santiago
Vargas-Bermudez, Diana S
Jaime, Jairo
Ruiz Saenz, Julian
dc.contributor.author.none.fl_str_mv Giraldo-Ramirez, Sebastian
Rendon-Marin, Santiago
Vargas-Bermudez, Diana S
Jaime, Jairo
Ruiz Saenz, Julian
description Canine Circovirus (CanineCV) is an emerging virus which since its first report in USA in 2012, it has been described worldwide. It was the second mammalian circovirus species identified in dogs and its role in canine enteritis is still being uncertain as much as its association in disease with the Canine Parvovirus-2 (CPV-2). Here, we aim to confirm for the first time the presence of CanineCV in Colombia and to develop phylogenetic evolutive analyses of CanineCV in CPV-2 positive animals. DNA from samples were extracted and PCR, full genome sequencing and phylogenetic analysis was performed to detect and characterize CanineCV. From a total of 30 CPV-2 positive samples, 16.6% (n = 5) were positives for CanineCV. Sequencing analysis of Colombian CanineCV wild-type strains displayed high identity to each other (99.5-99.7% nt; 99.7% aa). The full genome phylogenetic analysis confirmed that worldwide reported CanineCV strains were separated into four distinct genotypes in addition to a European origin of the South American CanineCV strains. This study demonstrated the importance of continue surveillance of emerging viruses in canine populations and confirm for the first time the circulation and origin of CanineCV in Colombia.
publishDate 2020
dc.date.issued.none.fl_str_mv 2020
dc.date.accessioned.none.fl_str_mv 2021-12-16T22:15:42Z
dc.date.available.none.fl_str_mv 2021-12-16T22:15:42Z
dc.type.none.fl_str_mv Artículo
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dc.identifier.none.fl_str_mv https://doi.org/10.1371/journal.pone.0213425
dc.identifier.issn.spa.fl_str_mv 20452322
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12494/41673
dc.identifier.bibliographicCitation.spa.fl_str_mv Giraldo S,Rendon S,Vargas DS,Jaime J,Ruiz J. First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America. Sci Rep. 2020. 10. (1):p. 17579-17579. .
url https://doi.org/10.1371/journal.pone.0213425
https://hdl.handle.net/20.500.12494/41673
identifier_str_mv 20452322
Giraldo S,Rendon S,Vargas DS,Jaime J,Ruiz J. First detection and full genomic analysis of Canine Circovirus in CPV-2 infected dogs in Colombia, South America. Sci Rep. 2020. 10. (1):p. 17579-17579. .
dc.relation.ispartofjournal.spa.fl_str_mv SCI REP-UK
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dc.format.extent.spa.fl_str_mv 17579-17579
dc.publisher.spa.fl_str_mv Nature Publishing Group
institution Universidad Cooperativa de Colombia
repository.name.fl_str_mv Repositorio Institucional Universidad Cooperativa de Colombia
repository.mail.fl_str_mv bdigital@metabiblioteca.com
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